RNA–Protein interactions for RNA: ENST00000538260.5

ARMC8-223, Transcript of armadillo repeat containing 8, human

TSL 2 BASIC

Gene ARMC8, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARMC8-223	ENST00000538260	UBE2H	P62256	183 aa		12.5	□□□□□ -0.41
ARMC8-223	ENST00000538260	GUCY1B3	Q02153	619 aa		12.5	□□□□□ -0.41
ARMC8-223	ENST00000538260	CTCFL	Q8NI51	663 aa	Predicted RBP	12.5	□□□□□ -0.41
ARMC8-223	ENST00000538260	PRIMPOL	Q96LW4	560 aa		12.5	□□□□□ -0.41
ARMC8-223	ENST00000538260	DYNC1I1	O14576	645 aa		12.5	□□□□□ -0.41
ARMC8-223	ENST00000538260	CCDC8	Q9H0W5	538 aa	Predicted RBP	12.5	□□□□□ -0.41
ARMC8-223	ENST00000538260	PTPRC	P08575	1304 aa		12.5	□□□□□ -0.41
ARMC8-223	ENST00000538260	GOLGA6L9	A6NEM1	432 aa		12.5	□□□□□ -0.41
ARMC8-223	ENST00000538260	STARD3NL	O95772	234 aa		12.5	□□□□□ -0.41
ARMC8-223	ENST00000538260	ZNF76	P36508	570 aa		12.5	□□□□□ -0.41
ARMC8-223	ENST00000538260	LUZP1	Q86V48	1076 aa		12.5	□□□□□ -0.41
ARMC8-223	ENST00000538260	FGFR1OP	O95684	399 aa	Known RBP	12.5	□□□□□ -0.41
ARMC8-223	ENST00000538260	GBP2	P32456	591 aa	Predicted RBP	12.5	□□□□□ -0.41
ARMC8-223	ENST00000538260	ZNF213	O14771	459 aa		12.49	□□□□□ -0.41
ARMC8-223	ENST00000538260	PRDM10	Q9NQV6	1147 aa		12.49	□□□□□ -0.41
ARMC8-223	ENST00000538260	MINDY4B	A8MYZ0	360 aa		12.49	□□□□□ -0.41
ARMC8-223	ENST00000538260	IQCA1	Q86XH1	822 aa		12.49	□□□□□ -0.41
ARMC8-223	ENST00000538260	EVI5L	Q96CN4	794 aa		12.49	□□□□□ -0.41
ARMC8-223	ENST00000538260	USP5	P45974	858 aa		12.49	□□□□□ -0.41
ARMC8-223	ENST00000538260	STX1A	Q16623	288 aa		12.49	□□□□□ -0.41
ARMC8-223	ENST00000538260	KLHL34	Q8N239	644 aa		12.49	□□□□□ -0.41
ARMC8-223	ENST00000538260	RAB34	Q9BZG1	259 aa		12.49	□□□□□ -0.41
ARMC8-223	ENST00000538260	FAM107B	Q9H098	131 aa		12.49	□□□□□ -0.41
ARMC8-223	ENST00000538260	DBF4	Q9UBU7	674 aa	Predicted RBP	12.49	□□□□□ -0.41
ARMC8-223	ENST00000538260	POLR3G	O15318	223 aa	Predicted RBP	12.49	□□□□□ -0.41
ARMC8-223	ENST00000538260	YEATS4	O95619	227 aa		12.49	□□□□□ -0.41
ARMC8-223	ENST00000538260	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.49	□□□□□ -0.41
ARMC8-223	ENST00000538260	DYDC1	Q8WWB3	177 aa		12.49	□□□□□ -0.41
ARMC8-223	ENST00000538260	POTEB2	H3BUK9	544 aa		12.48	□□□□□ -0.41
ARMC8-223	ENST00000538260	MAP3K12	Q12852	859 aa		12.48	□□□□□ -0.41
ARMC8-223	ENST00000538260	POTEJ	P0CG39	1038 aa		12.48	□□□□□ -0.41
ARMC8-223	ENST00000538260	DES	P17661	470 aa		12.48	□□□□□ -0.41
ARMC8-223	ENST00000538260	FLII	Q13045	1269 aa		12.48	□□□□□ -0.41
ARMC8-223	ENST00000538260	AMOT	Q4VCS5	1084 aa		12.48	□□□□□ -0.41
ARMC8-223	ENST00000538260	BMS1	Q14692	1282 aa	Known RBP	12.48	□□□□□ -0.41
ARMC8-223	ENST00000538260	TSG101	Q99816	390 aa		12.48	□□□□□ -0.41
ARMC8-223	ENST00000538260	RNF41	Q9H4P4	317 aa	Predicted RBP	12.48	□□□□□ -0.41
ARMC8-223	ENST00000538260	GJB2	P29033	226 aa		12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	ZC3H6	P61129	1189 aa	Known RBP	12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	CCDC82	Q8N4S0	544 aa		12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	CPLX3	Q8WVH0	158 aa		12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	SMARCC1	Q92922	1105 aa	Predicted RBP	12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	SLC12A7	Q9Y666	1083 aa		12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	KIF20A	O95235	890 aa		12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	IGHD	P01880	384 aa		12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	CLCN1	P35523	988 aa		12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	MAP2K1	Q02750	393 aa	Predicted RBP	12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	TMC6	Q7Z403	805 aa		12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	GOLGA8B	A8MQT2	603 aa		12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	HCLS1	P14317	486 aa	Predicted RBP	12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	SNW1	Q13573	536 aa	Known RBP	12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	SPECC1	Q5M775	1068 aa		12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	NUP88	Q99567	741 aa	Predicted RBP	12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	SEC63	Q9UGP8	760 aa	Known RBP	12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	PAXBP1	Q9Y5B6	917 aa		12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	NCOA1	Q15788	1441 aa		12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	PTCD1	O75127	700 aa	Known RBP	12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	MYD88	Q99836	296 aa		12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	MKNK2	Q9HBH9	465 aa		12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.47	□□□□□ -0.41
ARMC8-223	ENST00000538260	SSR1	P43307	286 aa	Known RBP	12.46	□□□□□ -0.41
ARMC8-223	ENST00000538260	IFIT5	Q13325	482 aa	Known RBP	12.46	□□□□□ -0.41
ARMC8-223	ENST00000538260	ANKLE2	Q86XL3	938 aa		12.46	□□□□□ -0.41
ARMC8-223	ENST00000538260	BIN1	O00499	593 aa		12.46	□□□□□ -0.41
ARMC8-223	ENST00000538260	IFIT3	O14879	490 aa	Known RBP	12.46	□□□□□ -0.41
ARMC8-223	ENST00000538260	CCT2	P78371	535 aa	Known RBP	12.46	□□□□□ -0.41
ARMC8-223	ENST00000538260	RBM5	P52756	815 aa	Known RBP eCLIP	12.46	□□□□□ -0.42
ARMC8-223	ENST00000538260	IFFO1	Q0D2I5	559 aa		12.46	□□□□□ -0.42
ARMC8-223	ENST00000538260	HDAC1	Q13547	482 aa	Predicted RBP	12.46	□□□□□ -0.42
ARMC8-223	ENST00000538260	LRSAM1	Q6UWE0	723 aa		12.46	□□□□□ -0.42
ARMC8-223	ENST00000538260	GIMAP7	Q8NHV1	300 aa		12.46	□□□□□ -0.42
ARMC8-223	ENST00000538260	RAPGEF3	O95398	923 aa		12.46	□□□□□ -0.42
ARMC8-223	ENST00000538260	TTC22	Q5TAA0	569 aa		12.46	□□□□□ -0.42
ARMC8-223	ENST00000538260	LARP6	Q9BRS8	491 aa	Known RBP	12.46	□□□□□ -0.42
ARMC8-223	ENST00000538260	NAA15	Q9BXJ9	866 aa	Known RBP	12.46	□□□□□ -0.42
ARMC8-223	ENST00000538260	HYPK	Q9NX55	129 aa		12.46	□□□□□ -0.42
ARMC8-223	ENST00000538260	ORC3	Q9UBD5	711 aa	Predicted RBP	12.46	□□□□□ -0.42
ARMC8-223	ENST00000538260	USP16	Q9Y5T5	823 aa		12.46	□□□□□ -0.42
ARMC8-223	ENST00000538260	EMILIN1	Q9Y6C2	1016 aa		12.46	□□□□□ -0.42
ARMC8-223	ENST00000538260	IL16	Q14005	1332 aa		12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	CCDC194	A0A1B0GVG4	234 aa		12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	GOLGA8A	A7E2F4	631 aa		12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	TDRD12	Q587J7	1177 aa	Known RBP	12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	CAVIN4	Q5BKX8	364 aa		12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	PPP4R3B	Q5MIZ7	849 aa		12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	CCDC102B	Q68D86	513 aa		12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	MICALCL	Q6ZW33	695 aa		12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	CCDC113	Q9H0I3	377 aa		12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	IARS	P41252	1262 aa	Known RBP	12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	NME9	Q86XW9	330 aa		12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	KRI1	Q8N9T8	703 aa	Known RBP	12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	HMG20B	Q9P0W2	317 aa		12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	SSRP1	Q08945	709 aa	Known RBP	12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	ZSCAN23	Q3MJ62	389 aa		12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	ARHGAP45	Q92619	1136 aa		12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	MAP3K1	Q13233	1512 aa		12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	GTF2F1	P35269	517 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	WAPL	Q7Z5K2	1190 aa		12.45	□□□□□ -0.42
ARMC8-223	ENST00000538260	DHX37	Q8IY37	1157 aa	Known RBP	12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms