RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 MKRN1Q9UHC7 482 aaKnown RBP13.68□□□□□ -0.22
CLSTN3-203ENST00000534830 CNTNAP4Q9C0A0 1308 aa13.67□□□□□ -0.22
CLSTN3-203ENST00000534830 MYH14Q7Z406 1995 aaKnown RBP13.67□□□□□ -0.22
CLSTN3-203ENST00000534830 FOXN1O15353 648 aa13.66□□□□□ -0.22
CLSTN3-203ENST00000534830 LMNB1P20700 586 aa13.66□□□□□ -0.22
CLSTN3-203ENST00000534830 DDR1Q08345 913 aa13.66□□□□□ -0.22
CLSTN3-203ENST00000534830 FKBP8Q14318 412 aa13.66□□□□□ -0.22
CLSTN3-203ENST00000534830 CC2D1BQ5T0F9 858 aaKnown RBP13.66□□□□□ -0.22
CLSTN3-203ENST00000534830 SRP68Q9UHB9 627 aaKnown RBP13.66□□□□□ -0.22
CLSTN3-203ENST00000534830 COL3A1P02461 1466 aaPredicted RBP13.65□□□□□ -0.22
CLSTN3-203ENST00000534830 ADAMTS7Q9UKP4 1686 aa13.65□□□□□ -0.22
CLSTN3-203ENST00000534830 CCDC88AQ3V6T2 1871 aa13.65□□□□□ -0.22
CLSTN3-203ENST00000534830 CABP4P57796 275 aa13.64□□□□□ -0.23
CLSTN3-203ENST00000534830 AKAP4Q5JQC9 854 aa13.64□□□□□ -0.23
CLSTN3-203ENST00000534830 C1orf141Q5JVX7 400 aa13.64□□□□□ -0.23
CLSTN3-203ENST00000534830 PRDM10Q9NQV6 1147 aa13.64□□□□□ -0.23
CLSTN3-203ENST00000534830 CREBZFQ9NS37 354 aa13.64□□□□□ -0.23
CLSTN3-203ENST00000534830 DIAPH1O60610 1272 aaKnown RBP13.63□□□□□ -0.23
CLSTN3-203ENST00000534830 FAM161AQ3B820 660 aa13.63□□□□□ -0.23
CLSTN3-203ENST00000534830 NFATC2IPQ8NCF5 419 aa13.63□□□□□ -0.23
CLSTN3-203ENST00000534830 AIDAQ96BJ3 306 aa13.63□□□□□ -0.23
CLSTN3-203ENST00000534830 USP42Q9H9J4 1324 aaKnown RBP13.63□□□□□ -0.23
CLSTN3-203ENST00000534830 TIAM2Q8IVF5 1701 aa13.62□□□□□ -0.23
CLSTN3-203ENST00000534830 POLRMTO00411 1230 aaKnown RBP13.62□□□□□ -0.23
CLSTN3-203ENST00000534830 DPY19L2Q6NUT2 758 aa13.62□□□□□ -0.23
CLSTN3-203ENST00000534830 TJP1Q07157 1748 aa13.61□□□□□ -0.23
CLSTN3-203ENST00000534830 MRC1P22897 1456 aa13.61□□□□□ -0.23
CLSTN3-203ENST00000534830 POTECB2RU33 542 aa13.61□□□□□ -0.23
CLSTN3-203ENST00000534830 PTCD1O75127 700 aaKnown RBP13.61□□□□□ -0.23
CLSTN3-203ENST00000534830 HMOX1P09601 288 aa13.61□□□□□ -0.23
CLSTN3-203ENST00000534830 CRKLP46109 303 aaKnown RBP13.61□□□□□ -0.23
CLSTN3-203ENST00000534830 CTCFP49711 727 aaPredicted RBP13.61□□□□□ -0.23
CLSTN3-203ENST00000534830 LGR6Q9HBX8 967 aa13.61□□□□□ -0.23
CLSTN3-203ENST00000534830 RNMTO43148 476 aaKnown RBP13.6□□□□□ -0.23
CLSTN3-203ENST00000534830 MTHFSDQ2M296 383 aaKnown RBP13.6□□□□□ -0.23
CLSTN3-203ENST00000534830 CHADLQ6NUI6 762 aa13.6□□□□□ -0.23
CLSTN3-203ENST00000534830 SLC52A2Q9HAB3 445 aa13.6□□□□□ -0.23
CLSTN3-203ENST00000534830 ZPR1O75312 459 aa13.59□□□□□ -0.23
CLSTN3-203ENST00000534830 TM4SF1P30408 202 aa13.59□□□□□ -0.23
CLSTN3-203ENST00000534830 TTLL6Q8N841 843 aa13.59□□□□□ -0.23
CLSTN3-203ENST00000534830 CNTNAP1P78357 1384 aa13.58□□□□□ -0.23
CLSTN3-203ENST00000534830 LBX1P52954 281 aa13.58□□□□□ -0.24
CLSTN3-203ENST00000534830 NFKBIEO00221 500 aa13.57□□□□□ -0.24
CLSTN3-203ENST00000534830 POTEIP0CG38 1075 aa13.57□□□□□ -0.24
CLSTN3-203ENST00000534830 POTEJP0CG39 1038 aa13.57□□□□□ -0.24
CLSTN3-203ENST00000534830 USPL1Q5W0Q7 1092 aa13.57□□□□□ -0.24
CLSTN3-203ENST00000534830 ABHD8Q96I13 439 aa13.57□□□□□ -0.24
CLSTN3-203ENST00000534830 SIPA1L3O60292 1781 aaPredicted RBP13.57□□□□□ -0.24
CLSTN3-203ENST00000534830 UBR2Q8IWV8 1755 aa13.57□□□□□ -0.24
CLSTN3-203ENST00000534830 AFDNP55196 1824 aaKnown RBP13.56□□□□□ -0.24
CLSTN3-203ENST00000534830 ERFEQ4G0M1 354 aa13.56□□□□□ -0.24
CLSTN3-203ENST00000534830 C2CD5Q86YS7 1000 aa13.56□□□□□ -0.24
CLSTN3-203ENST00000534830 H0YIN7 160 aa13.55□□□□□ -0.24
CLSTN3-203ENST00000534830 VEGFBP49765 207 aa13.55□□□□□ -0.24
CLSTN3-203ENST00000534830 NFIXQ14938 502 aa13.55□□□□□ -0.24
CLSTN3-203ENST00000534830 INTS5Q6P9B9 1019 aaKnown RBP13.55□□□□□ -0.24
CLSTN3-203ENST00000534830 ZNF219Q9P2Y4 722 aaPredicted RBP13.55□□□□□ -0.24
CLSTN3-203ENST00000534830 DLEC1Q9Y238 1755 aa13.55□□□□□ -0.24
CLSTN3-203ENST00000534830 MLLT1Q03111 559 aaPredicted RBP13.54□□□□□ -0.24
CLSTN3-203ENST00000534830 SLC39A6Q13433 755 aa13.54□□□□□ -0.24
CLSTN3-203ENST00000534830 WBP1LQ9NX94 342 aa13.54□□□□□ -0.24
CLSTN3-203ENST00000534830 CCDC85CA6NKD9 419 aa13.53□□□□□ -0.24
CLSTN3-203ENST00000534830 DDNO94850 711 aaPredicted RBP13.53□□□□□ -0.24
CLSTN3-203ENST00000534830 SERPINB2P05120 415 aa13.53□□□□□ -0.24
CLSTN3-203ENST00000534830 PPP2R1AP30153 589 aa13.53□□□□□ -0.24
CLSTN3-203ENST00000534830 CNGB1Q14028 1251 aaPredicted RBP13.53□□□□□ -0.24
CLSTN3-203ENST00000534830 DNAJC10Q8IXB1 793 aa13.53□□□□□ -0.24
CLSTN3-203ENST00000534830 IL17REQ8NFR9 667 aa13.53□□□□□ -0.24
CLSTN3-203ENST00000534830 ZNF622Q969S3 477 aaKnown RBP eCLIP13.53□□□□□ -0.24
CLSTN3-203ENST00000534830 RSPH6AQ9H0K4 717 aa13.53□□□□□ -0.24
CLSTN3-203ENST00000534830 DICER1Q9UPY3 1922 aaKnown RBP13.52□□□□□ -0.24
CLSTN3-203ENST00000534830 TMEM88BA6NKF7 163 aa13.52□□□□□ -0.25
CLSTN3-203ENST00000534830 U2SURPO15042 1029 aaKnown RBP13.52□□□□□ -0.25
CLSTN3-203ENST00000534830 C21orf2O43822 256 aa13.52□□□□□ -0.25
CLSTN3-203ENST00000534830 CYP19A1P11511 503 aaPredicted RBP13.52□□□□□ -0.25
CLSTN3-203ENST00000534830 VSIG10Q8N0Z9 540 aa13.52□□□□□ -0.25
CLSTN3-203ENST00000534830 GAS2L2Q8NHY3 880 aa13.52□□□□□ -0.25
CLSTN3-203ENST00000534830 CEMIPQ8WUJ3 1361 aa13.51□□□□□ -0.25
CLSTN3-203ENST00000534830 SOS1Q07889 1333 aaPredicted RBP13.51□□□□□ -0.25
CLSTN3-203ENST00000534830 PASKQ96RG2 1323 aa13.51□□□□□ -0.25
CLSTN3-203ENST00000534830 GNAT3A8MTJ3 354 aa13.51□□□□□ -0.25
CLSTN3-203ENST00000534830 HSPA8P11142 646 aaKnown RBP13.51□□□□□ -0.25
CLSTN3-203ENST00000534830 LDHDQ86WU2 507 aa13.51□□□□□ -0.25
CLSTN3-203ENST00000534830 PHACTR3Q96KR7 559 aa13.51□□□□□ -0.25
CLSTN3-203ENST00000534830 NRXN2Q9P2S2 1712 aa13.5□□□□□ -0.25
CLSTN3-203ENST00000534830 CFAP53Q96M91 514 aa13.5□□□□□ -0.25
CLSTN3-203ENST00000534830 NARFQ9UHQ1 456 aa13.5□□□□□ -0.25
CLSTN3-203ENST00000534830 CARMIL3Q8ND23 1372 aa13.49□□□□□ -0.25
CLSTN3-203ENST00000534830 FER1L6Q2WGJ9 1857 aa13.49□□□□□ -0.25
CLSTN3-203ENST00000534830 IQCA1LA6NCM1 817 aa13.49□□□□□ -0.25
CLSTN3-203ENST00000534830 PRKAR2BP31323 418 aa13.49□□□□□ -0.25
CLSTN3-203ENST00000534830 EAPPQ56P03 285 aaPredicted RBP13.49□□□□□ -0.25
CLSTN3-203ENST00000534830 BICDL1Q6ZP65 573 aa13.49□□□□□ -0.25
CLSTN3-203ENST00000534830 TAOK3Q9H2K8 898 aa13.49□□□□□ -0.25
CLSTN3-203ENST00000534830 COL15A1P39059 1388 aa13.48□□□□□ -0.25
CLSTN3-203ENST00000534830 DEFB115Q30KQ5 88 aa13.48□□□□□ -0.25
CLSTN3-203ENST00000534830 TAF1DQ9H5J8 278 aaPredicted RBP13.48□□□□□ -0.25
CLSTN3-203ENST00000534830 CLEC11AQ9Y240 323 aa13.48□□□□□ -0.25
CLSTN3-203ENST00000534830 NUDCQ9Y266 331 aa13.48□□□□□ -0.25
CLSTN3-203ENST00000534830 ITGBL1O95965 494 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms