RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 POLKQ9UBT6 870 aa13.37□□□□□ -0.27
AMBRA1-211ENST00000533727 PES1O00541 588 aaKnown RBP13.37□□□□□ -0.27
AMBRA1-211ENST00000533727 ALDH1L1O75891 902 aa13.37□□□□□ -0.27
AMBRA1-211ENST00000533727 ZNF772Q68DY9 489 aaPredicted RBP13.37□□□□□ -0.27
AMBRA1-211ENST00000533727 HDAC9Q9UKV0 1011 aa13.37□□□□□ -0.27
AMBRA1-211ENST00000533727 MBD5Q9P267 1494 aa13.37□□□□□ -0.27
AMBRA1-211ENST00000533727 RABEP1Q15276 862 aa13.37□□□□□ -0.27
AMBRA1-211ENST00000533727 ORAI2Q96SN7 254 aa13.37□□□□□ -0.27
AMBRA1-211ENST00000533727 MTMR7Q9Y216 660 aa13.37□□□□□ -0.27
AMBRA1-211ENST00000533727 CYP46A1Q9Y6A2 500 aa13.37□□□□□ -0.27
AMBRA1-211ENST00000533727 ZGPATQ8N5A5 531 aaKnown RBP13.36□□□□□ -0.27
AMBRA1-211ENST00000533727 TMEM94Q12767 1356 aa13.36□□□□□ -0.27
AMBRA1-211ENST00000533727 UQCRFS1P1P0C7P4 283 aa13.36□□□□□ -0.27
AMBRA1-211ENST00000533727 PDIA4P13667 645 aaKnown RBP13.36□□□□□ -0.27
AMBRA1-211ENST00000533727 GSTO1P78417 241 aa13.36□□□□□ -0.27
AMBRA1-211ENST00000533727 MAP3K2Q9Y2U5 619 aa13.36□□□□□ -0.27
AMBRA1-211ENST00000533727 FOXD4L5Q5VV16 416 aaPredicted RBP13.36□□□□□ -0.27
AMBRA1-211ENST00000533727 BICD2Q8TD16 824 aa13.36□□□□□ -0.27
AMBRA1-211ENST00000533727 FOXD4L4Q8WXT5 416 aaPredicted RBP13.36□□□□□ -0.27
AMBRA1-211ENST00000533727 A0A1W2PP64 1363 aa13.36□□□□□ -0.27
AMBRA1-211ENST00000533727 BAG3O95817 575 aa13.36□□□□□ -0.27
AMBRA1-211ENST00000533727 POLR3DP05423 398 aaPredicted RBP13.36□□□□□ -0.27
AMBRA1-211ENST00000533727 IMMTQ16891 758 aaKnown RBP13.36□□□□□ -0.27
AMBRA1-211ENST00000533727 LDHAL6AQ6ZMR3 332 aa13.36□□□□□ -0.27
AMBRA1-211ENST00000533727 ANKRD18AQ8IVF6 992 aa13.36□□□□□ -0.27
AMBRA1-211ENST00000533727 PREX2Q70Z35 1606 aa13.35□□□□□ -0.27
AMBRA1-211ENST00000533727 CHD1LQ86WJ1 897 aa13.35□□□□□ -0.27
AMBRA1-211ENST00000533727 SSH1Q8WYL5 1049 aa13.35□□□□□ -0.27
AMBRA1-211ENST00000533727 TMEM57Q8N5G2 664 aa13.35□□□□□ -0.27
AMBRA1-211ENST00000533727 PODXL2Q9NZ53 605 aa13.35□□□□□ -0.27
AMBRA1-211ENST00000533727 LTKP29376 864 aa13.35□□□□□ -0.27
AMBRA1-211ENST00000533727 PPP4R3BQ5MIZ7 849 aa13.35□□□□□ -0.27
AMBRA1-211ENST00000533727 MAP3K19Q56UN5 1328 aa13.35□□□□□ -0.27
AMBRA1-211ENST00000533727 RARSP54136 660 aaKnown RBP13.34□□□□□ -0.27
AMBRA1-211ENST00000533727 UTP14AQ9BVJ6 771 aaKnown RBP13.34□□□□□ -0.27
AMBRA1-211ENST00000533727 PLEKHH1Q9ULM0 1364 aa13.34□□□□□ -0.27
AMBRA1-211ENST00000533727 WASF1Q92558 559 aa13.34□□□□□ -0.27
AMBRA1-211ENST00000533727 EYA3Q99504 573 aa13.34□□□□□ -0.27
AMBRA1-211ENST00000533727 TRPC5Q9UL62 973 aaPredicted RBP13.34□□□□□ -0.27
AMBRA1-211ENST00000533727 TSPOAP1O95153 1857 aa13.34□□□□□ -0.27
AMBRA1-211ENST00000533727 TTLL12Q14166 644 aaPredicted RBP13.34□□□□□ -0.27
AMBRA1-211ENST00000533727 TRAPPC3LQ5T215 181 aa13.34□□□□□ -0.27
AMBRA1-211ENST00000533727 JMYQ8N9B5 988 aa13.34□□□□□ -0.27
AMBRA1-211ENST00000533727 FLAD1Q8NFF5 587 aa13.34□□□□□ -0.27
AMBRA1-211ENST00000533727 ARHGAP45Q92619 1136 aa13.34□□□□□ -0.27
AMBRA1-211ENST00000533727 CDK5RAP3Q96JB5 506 aa13.34□□□□□ -0.27
AMBRA1-211ENST00000533727 RNF41Q9H4P4 317 aaPredicted RBP13.34□□□□□ -0.27
AMBRA1-211ENST00000533727 DZIP3Q86Y13 1208 aaKnown RBP13.33□□□□□ -0.28
AMBRA1-211ENST00000533727 MBIPQ9NS73 344 aa13.33□□□□□ -0.28
AMBRA1-211ENST00000533727 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
AMBRA1-211ENST00000533727 CNKSR2Q8WXI2 1034 aa13.33□□□□□ -0.28
AMBRA1-211ENST00000533727 ZNF592Q92610 1267 aa13.33□□□□□ -0.28
AMBRA1-211ENST00000533727 ZNF396Q96N95 335 aaPredicted RBP13.33□□□□□ -0.28
AMBRA1-211ENST00000533727 CCNL1Q9UK58 526 aaPredicted RBP13.33□□□□□ -0.28
AMBRA1-211ENST00000533727 NOL7Q9UMY1 257 aaKnown RBP13.33□□□□□ -0.28
AMBRA1-211ENST00000533727 PLXNC1O60486 1568 aa13.32□□□□□ -0.28
AMBRA1-211ENST00000533727 ERVK-7P63135 1459 aa13.32□□□□□ -0.28
AMBRA1-211ENST00000533727 IPO7O95373 1038 aaKnown RBP13.32□□□□□ -0.28
AMBRA1-211ENST00000533727 NIP7Q9Y221 180 aaKnown RBP eCLIP13.32□□□□□ -0.28
AMBRA1-211ENST00000533727 NPC1L1Q9UHC9 1359 aa13.32□□□□□ -0.28
AMBRA1-211ENST00000533727 TTC37Q6PGP7 1564 aa13.32□□□□□ -0.28
AMBRA1-211ENST00000533727 HLA-DOAP06340 250 aa13.32□□□□□ -0.28
AMBRA1-211ENST00000533727 PARP10Q53GL7 1025 aa13.32□□□□□ -0.28
AMBRA1-211ENST00000533727 BLOC1S2Q6QNY1 142 aa13.32□□□□□ -0.28
AMBRA1-211ENST00000533727 CCAR2Q8N163 923 aaKnown RBP13.32□□□□□ -0.28
AMBRA1-211ENST00000533727 EYA1Q99502 592 aa13.32□□□□□ -0.28
AMBRA1-211ENST00000533727 MKNK2Q9HBH9 465 aa13.32□□□□□ -0.28
AMBRA1-211ENST00000533727 TESK2Q96S53 571 aa13.32□□□□□ -0.28
AMBRA1-211ENST00000533727 KDM5CP41229 1560 aa13.31□□□□□ -0.28
AMBRA1-211ENST00000533727 UBE3BQ7Z3V4 1068 aa13.31□□□□□ -0.28
AMBRA1-211ENST00000533727 ZSCAN31Q96LW9 406 aaPredicted RBP13.31□□□□□ -0.28
AMBRA1-211ENST00000533727 PI4KAP2A4QPH2 592 aa13.31□□□□□ -0.28
AMBRA1-211ENST00000533727 KSR2Q6VAB6 950 aa13.31□□□□□ -0.28
AMBRA1-211ENST00000533727 AEBP1Q8IUX7 1158 aa13.31□□□□□ -0.28
AMBRA1-211ENST00000533727 PI4KAP1Q8N8J0 262 aa13.31□□□□□ -0.28
AMBRA1-211ENST00000533727 IL1RAPL2Q9NP60 686 aa13.31□□□□□ -0.28
AMBRA1-211ENST00000533727 RNMTO43148 476 aaKnown RBP13.31□□□□□ -0.28
AMBRA1-211ENST00000533727 MX1P20591 662 aa13.31□□□□□ -0.28
AMBRA1-211ENST00000533727 OGFOD1Q8N543 542 aa13.31□□□□□ -0.28
AMBRA1-211ENST00000533727 XAGE3Q8WTP9 111 aa13.31□□□□□ -0.28
AMBRA1-211ENST00000533727 JDP2Q8WYK2 163 aa13.31□□□□□ -0.28
AMBRA1-211ENST00000533727 NAPBQ9H115 298 aa13.31□□□□□ -0.28
AMBRA1-211ENST00000533727 MPHOSPH10O00566 681 aaKnown RBP13.3□□□□□ -0.28
AMBRA1-211ENST00000533727 ZNF219Q9P2Y4 722 aaPredicted RBP13.3□□□□□ -0.28
AMBRA1-211ENST00000533727 HOXB7P09629 217 aa13.3□□□□□ -0.28
AMBRA1-211ENST00000533727 NF2P35240 595 aa13.3□□□□□ -0.28
AMBRA1-211ENST00000533727 CCDC196A0A1B0GTZ2 297 aa13.3□□□□□ -0.28
AMBRA1-211ENST00000533727 TMEM132AQ24JP5 1023 aa13.3□□□□□ -0.28
AMBRA1-211ENST00000533727 ANKRD2Q9GZV1 360 aa13.3□□□□□ -0.28
AMBRA1-211ENST00000533727 CABP5Q9NP86 173 aa13.3□□□□□ -0.28
AMBRA1-211ENST00000533727 NEK4P51957 841 aa13.29□□□□□ -0.28
AMBRA1-211ENST00000533727 ZNF444Q8N0Y2 327 aaPredicted RBP13.29□□□□□ -0.28
AMBRA1-211ENST00000533727 LRRFIP2Q9Y608 721 aaKnown RBP13.29□□□□□ -0.28
AMBRA1-211ENST00000533727 MTHFSDQ2M296 383 aaKnown RBP13.29□□□□□ -0.28
AMBRA1-211ENST00000533727 PAXIP1Q6ZW49 1069 aaPredicted RBP13.29□□□□□ -0.28
AMBRA1-211ENST00000533727 COPS6Q7L5N1 327 aa13.29□□□□□ -0.28
AMBRA1-211ENST00000533727 ZNF804AQ7Z570 1209 aa13.29□□□□□ -0.28
AMBRA1-211ENST00000533727 C16orf71Q8IYS4 520 aaPredicted RBP13.29□□□□□ -0.28
AMBRA1-211ENST00000533727 CCDC66A2RUB6 948 aa13.29□□□□□ -0.28
AMBRA1-211ENST00000533727 TRAF1Q13077 416 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms