RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ZPR1O75312 459 aa15.52■□□□□ 0.08
TRAPPC4-213ENST00000533149 TIAM2Q8IVF5 1701 aa15.51■□□□□ 0.07
TRAPPC4-213ENST00000533149 PTCD1O75127 700 aaKnown RBP15.51■□□□□ 0.07
TRAPPC4-213ENST00000533149 ABHD8Q96I13 439 aa15.51■□□□□ 0.07
TRAPPC4-213ENST00000533149 MYH14Q7Z406 1995 aaKnown RBP15.51■□□□□ 0.07
TRAPPC4-213ENST00000533149 KIF20BQ96Q89 1820 aa15.51■□□□□ 0.07
TRAPPC4-213ENST00000533149 HSPA5P11021 654 aaKnown RBP15.5■□□□□ 0.07
TRAPPC4-213ENST00000533149 EIF4G2P78344 907 aaKnown RBP eCLIP15.5■□□□□ 0.07
TRAPPC4-213ENST00000533149 H0YIN7 160 aa15.49■□□□□ 0.07
TRAPPC4-213ENST00000533149 NFKBIEO00221 500 aa15.49■□□□□ 0.07
TRAPPC4-213ENST00000533149 LBX1P52954 281 aa15.49■□□□□ 0.07
TRAPPC4-213ENST00000533149 MLLT1Q03111 559 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC4-213ENST00000533149 ERFEQ4G0M1 354 aa15.49■□□□□ 0.07
TRAPPC4-213ENST00000533149 WBP1LQ9NX94 342 aa15.49■□□□□ 0.07
TRAPPC4-213ENST00000533149 VEGFBP49765 207 aa15.48■□□□□ 0.07
TRAPPC4-213ENST00000533149 USPL1Q5W0Q7 1092 aa15.48■□□□□ 0.07
TRAPPC4-213ENST00000533149 C2CD5Q86YS7 1000 aa15.48■□□□□ 0.07
TRAPPC4-213ENST00000533149 NFIXQ14938 502 aa15.47■□□□□ 0.07
TRAPPC4-213ENST00000533149 PLEKHO1Q53GL0 409 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC4-213ENST00000533149 INTS5Q6P9B9 1019 aaKnown RBP15.47■□□□□ 0.07
TRAPPC4-213ENST00000533149 PASKQ96RG2 1323 aa15.47■□□□□ 0.07
TRAPPC4-213ENST00000533149 TMEM88BA6NKF7 163 aa15.46■□□□□ 0.07
TRAPPC4-213ENST00000533149 AMOTQ4VCS5 1084 aa15.46■□□□□ 0.07
TRAPPC4-213ENST00000533149 CDCA8Q53HL2 280 aa15.46■□□□□ 0.07
TRAPPC4-213ENST00000533149 ANKRD26Q9UPS8 1709 aa15.46■□□□□ 0.07
TRAPPC4-213ENST00000533149 CCDC88AQ3V6T2 1871 aa15.46■□□□□ 0.06
TRAPPC4-213ENST00000533149 DLEC1Q9Y238 1755 aa15.46■□□□□ 0.06
TRAPPC4-213ENST00000533149 IQCA1LA6NCM1 817 aa15.45■□□□□ 0.06
TRAPPC4-213ENST00000533149 SERPINB2P05120 415 aa15.45■□□□□ 0.06
TRAPPC4-213ENST00000533149 MTHFSP49914 203 aa15.45■□□□□ 0.06
TRAPPC4-213ENST00000533149 LDHDQ86WU2 507 aa15.45■□□□□ 0.06
TRAPPC4-213ENST00000533149 POTEIP0CG38 1075 aa15.44■□□□□ 0.06
TRAPPC4-213ENST00000533149 POTEJP0CG39 1038 aa15.44■□□□□ 0.06
TRAPPC4-213ENST00000533149 RGS19P49795 217 aa15.44■□□□□ 0.06
TRAPPC4-213ENST00000533149 MAP2K1Q02750 393 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC4-213ENST00000533149 ZNF530Q6P9A1 599 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC4-213ENST00000533149 NFATC2IPQ8NCF5 419 aa15.44■□□□□ 0.06
TRAPPC4-213ENST00000533149 NARFQ9UHQ1 456 aa15.44■□□□□ 0.06
TRAPPC4-213ENST00000533149 PDZRN3Q9UPQ7 1066 aa15.44■□□□□ 0.06
TRAPPC4-213ENST00000533149 SOS1Q07889 1333 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC4-213ENST00000533149 DDNO94850 711 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC4-213ENST00000533149 HSPA8P11142 646 aaKnown RBP15.43■□□□□ 0.06
TRAPPC4-213ENST00000533149 EIF4A2Q14240 407 aaKnown RBP15.43■□□□□ 0.06
TRAPPC4-213ENST00000533149 C1orf141Q5JVX7 400 aa15.43■□□□□ 0.06
TRAPPC4-213ENST00000533149 CARD14Q9BXL6 1004 aa15.43■□□□□ 0.06
TRAPPC4-213ENST00000533149 POLKQ9UBT6 870 aa15.43■□□□□ 0.06
TRAPPC4-213ENST00000533149 NRXN2Q9P2S2 1712 aa15.43■□□□□ 0.06
TRAPPC4-213ENST00000533149 LTBP3Q9NS15 1303 aa15.43■□□□□ 0.06
TRAPPC4-213ENST00000533149 ADAMTS7Q9UKP4 1686 aa15.43■□□□□ 0.06
TRAPPC4-213ENST00000533149 CCDC85CA6NKD9 419 aa15.43■□□□□ 0.06
TRAPPC4-213ENST00000533149 AFDNP55196 1824 aaKnown RBP15.42■□□□□ 0.06
TRAPPC4-213ENST00000533149 C21orf2O43822 256 aa15.42■□□□□ 0.06
TRAPPC4-213ENST00000533149 ZNF622Q969S3 477 aaKnown RBP eCLIP15.42■□□□□ 0.06
TRAPPC4-213ENST00000533149 TAOK3Q9H2K8 898 aa15.42■□□□□ 0.06
TRAPPC4-213ENST00000533149 TJP1Q07157 1748 aa15.41■□□□□ 0.06
TRAPPC4-213ENST00000533149 RASSF10A6NK89 507 aa15.41■□□□□ 0.06
TRAPPC4-213ENST00000533149 ITGBL1O95965 494 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC4-213ENST00000533149 PDE6BP35913 854 aa15.41■□□□□ 0.06
TRAPPC4-213ENST00000533149 DEFB115Q30KQ5 88 aa15.41■□□□□ 0.06
TRAPPC4-213ENST00000533149 DICER1Q9UPY3 1922 aaKnown RBP15.4■□□□□ 0.06
TRAPPC4-213ENST00000533149 DNAJC10Q8IXB1 793 aa15.4■□□□□ 0.06
TRAPPC4-213ENST00000533149 L3MBTL3Q96JM7 780 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC4-213ENST00000533149 TAF1DQ9H5J8 278 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC4-213ENST00000533149 VIRMAQ69YN4 1812 aaKnown RBP15.39■□□□□ 0.06
TRAPPC4-213ENST00000533149 COL15A1P39059 1388 aa15.39■□□□□ 0.05
TRAPPC4-213ENST00000533149 SOGA3Q5TF21 947 aa15.39■□□□□ 0.05
TRAPPC4-213ENST00000533149 BRIP1Q9BX63 1249 aa15.39■□□□□ 0.05
TRAPPC4-213ENST00000533149 BCL2L12Q9HB09 334 aa15.39■□□□□ 0.05
TRAPPC4-213ENST00000533149 ZNF219Q9P2Y4 722 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC4-213ENST00000533149 WDR33Q9C0J8 1336 aaKnown RBP15.38■□□□□ 0.05
TRAPPC4-213ENST00000533149 CYP19A1P11511 503 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC4-213ENST00000533149 BEGAINQ9BUH8 593 aa15.38■□□□□ 0.05
TRAPPC4-213ENST00000533149 CARMIL3Q8ND23 1372 aa15.37■□□□□ 0.05
TRAPPC4-213ENST00000533149 FER1L6Q2WGJ9 1857 aa15.37■□□□□ 0.05
TRAPPC4-213ENST00000533149 SCN4AP35499 1836 aa15.37■□□□□ 0.05
TRAPPC4-213ENST00000533149 EAPPQ56P03 285 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC4-213ENST00000533149 CNKSR1Q969H4 720 aa15.37■□□□□ 0.05
TRAPPC4-213ENST00000533149 CLEC11AQ9Y240 323 aa15.37■□□□□ 0.05
TRAPPC4-213ENST00000533149 BICDL1Q6ZP65 573 aa15.36■□□□□ 0.05
TRAPPC4-213ENST00000533149 PNMA8AQ86V59 439 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC4-213ENST00000533149 HACL1Q9UJ83 578 aa15.35■□□□□ 0.05
TRAPPC4-213ENST00000533149 ABT1Q9ULW3 272 aaKnown RBP15.35■□□□□ 0.05
TRAPPC4-213ENST00000533149 ZBTB1Q9Y2K1 713 aa15.35■□□□□ 0.05
TRAPPC4-213ENST00000533149 A0A087WZG4 1122 aa15.34■□□□□ 0.05
TRAPPC4-213ENST00000533149 TNNT2P45379 298 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC4-213ENST00000533149 CNTROBQ8N137 903 aa15.34■□□□□ 0.05
TRAPPC4-213ENST00000533149 EPHX2P34913 555 aa15.33■□□□□ 0.04
TRAPPC4-213ENST00000533149 ECE1P42892 770 aa15.33■□□□□ 0.04
TRAPPC4-213ENST00000533149 STYK1Q6J9G0 422 aa15.33■□□□□ 0.04
TRAPPC4-213ENST00000533149 VSIG10Q8N0Z9 540 aa15.33■□□□□ 0.04
TRAPPC4-213ENST00000533149 SLC52A2Q9HAB3 445 aa15.33■□□□□ 0.04
TRAPPC4-213ENST00000533149 DIEXFQ68CQ4 756 aaKnown RBP15.32■□□□□ 0.04
TRAPPC4-213ENST00000533149 PRR5LQ6MZQ0 368 aa15.32■□□□□ 0.04
TRAPPC4-213ENST00000533149 PRPF40BQ6NWY9 871 aaKnown RBP15.32■□□□□ 0.04
TRAPPC4-213ENST00000533149 CANXP27824 592 aaKnown RBP15.31■□□□□ 0.04
TRAPPC4-213ENST00000533149 TBC1D9BQ66K14 1250 aa15.31■□□□□ 0.04
TRAPPC4-213ENST00000533149 MAP1SQ66K74 1059 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC4-213ENST00000533149 CFAP44Q96MT7 982 aa15.31■□□□□ 0.04
TRAPPC4-213ENST00000533149 NPHP1O15259 732 aa15.3■□□□□ 0.04
TRAPPC4-213ENST00000533149 STARD3NLO95772 234 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms