RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 TTLL12Q14166 644 aaPredicted RBP9.46□□□□□ -0.9
CTNND1-234ENST00000532844 TMCO3Q6UWJ1 677 aa9.46□□□□□ -0.9
CTNND1-234ENST00000532844 LRRFIP2Q9Y608 721 aaKnown RBP9.46□□□□□ -0.9
CTNND1-234ENST00000532844 RBM5P52756 815 aaKnown RBP eCLIP9.46□□□□□ -0.9
CTNND1-234ENST00000532844 CCDC183Q5T5S1 534 aa9.46□□□□□ -0.9
CTNND1-234ENST00000532844 LRP2BPQ9P2M1 347 aa9.46□□□□□ -0.9
CTNND1-234ENST00000532844 TNNT1P13805 278 aa9.46□□□□□ -0.9
CTNND1-234ENST00000532844 MICALCLQ6ZW33 695 aa9.46□□□□□ -0.9
CTNND1-234ENST00000532844 ZSCAN30Q86W11 494 aa9.46□□□□□ -0.9
CTNND1-234ENST00000532844 PIBF1Q8WXW3 757 aa9.46□□□□□ -0.9
CTNND1-234ENST00000532844 TNPO1Q92973 898 aaKnown RBP9.46□□□□□ -0.9
CTNND1-234ENST00000532844 CD109Q6YHK3 1445 aa9.45□□□□□ -0.9
CTNND1-234ENST00000532844 MYCNP04198 464 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-234ENST00000532844 CCDC175P0C221 793 aa9.45□□□□□ -0.9
CTNND1-234ENST00000532844 GBP3Q9H0R5 595 aa9.45□□□□□ -0.9
CTNND1-234ENST00000532844 METTL24Q5JXM2 366 aa9.45□□□□□ -0.9
CTNND1-234ENST00000532844 ZNF710Q8N1W2 664 aa9.45□□□□□ -0.9
CTNND1-234ENST00000532844 IGHDP01880 384 aa9.45□□□□□ -0.9
CTNND1-234ENST00000532844 IGHMBP2P38935 993 aaKnown RBP9.45□□□□□ -0.9
CTNND1-234ENST00000532844 LARP1Q6PKG0 1096 aaKnown RBP9.45□□□□□ -0.9
CTNND1-234ENST00000532844 CGNQ9P2M7 1197 aaKnown RBP9.45□□□□□ -0.9
CTNND1-234ENST00000532844 NSD2O96028 1365 aa9.45□□□□□ -0.9
CTNND1-234ENST00000532844 U3KPZ7 1027 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-234ENST00000532844 PTPRCP08575 1304 aa9.44□□□□□ -0.9
CTNND1-234ENST00000532844 THOC2Q8NI27 1593 aaKnown RBP9.44□□□□□ -0.9
CTNND1-234ENST00000532844 ZNF526Q8TF50 670 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-234ENST00000532844 CRACR2AQ9BSW2 395 aa9.44□□□□□ -0.9
CTNND1-234ENST00000532844 AKAP2Q9Y2D5 859 aa9.44□□□□□ -0.9
CTNND1-234ENST00000532844 CCDC8Q9H0W5 538 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-234ENST00000532844 SH2B1Q9NRF2 756 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-234ENST00000532844 CEP131Q9UPN4 1083 aa9.44□□□□□ -0.9
CTNND1-234ENST00000532844 SEPT6Q14141 434 aa9.44□□□□□ -0.9
CTNND1-234ENST00000532844 TBC1D9Q6ZT07 1266 aa9.44□□□□□ -0.9
CTNND1-234ENST00000532844 WASLO00401 505 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-234ENST00000532844 BICDL1Q6ZP65 573 aa9.44□□□□□ -0.9
CTNND1-234ENST00000532844 DNAAF4Q8WXU2 420 aa9.44□□□□□ -0.9
CTNND1-234ENST00000532844 IFIT1P09914 478 aaKnown RBP9.43□□□□□ -0.9
CTNND1-234ENST00000532844 UBXN4Q92575 508 aa9.43□□□□□ -0.9
CTNND1-234ENST00000532844 MAPKBP1O60336 1514 aa9.43□□□□□ -0.9
CTNND1-234ENST00000532844 STARD3NLO95772 234 aa9.43□□□□□ -0.9
CTNND1-234ENST00000532844 CFAP100Q494V2 611 aa9.43□□□□□ -0.9
CTNND1-234ENST00000532844 DAAM2Q86T65 1068 aa9.43□□□□□ -0.9
CTNND1-234ENST00000532844 TRIM21P19474 475 aaKnown RBP9.43□□□□□ -0.9
CTNND1-234ENST00000532844 MPRIPQ6WCQ1 1025 aa9.43□□□□□ -0.9
CTNND1-234ENST00000532844 SSBP05455 408 aaKnown RBP eCLIP9.43□□□□□ -0.91e-7■■■■■ 26.8
CTNND1-234ENST00000532844 AMOTQ4VCS5 1084 aa9.43□□□□□ -0.9
CTNND1-234ENST00000532844 MBIPQ9NS73 344 aa9.43□□□□□ -0.9
CTNND1-234ENST00000532844 LARP6Q9BRS8 491 aaKnown RBP9.42□□□□□ -0.9
CTNND1-234ENST00000532844 PDCL3Q9H2J4 239 aa9.42□□□□□ -0.9
CTNND1-234ENST00000532844 LIMCH1Q9UPQ0 1083 aa9.42□□□□□ -0.9
CTNND1-234ENST00000532844 SMC1AQ14683 1233 aaKnown RBP9.42□□□□□ -0.9
CTNND1-234ENST00000532844 SCAND2PQ9GZW5 306 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-234ENST00000532844 ABCF2Q9UG63 623 aa9.42□□□□□ -0.9
CTNND1-234ENST00000532844 PTCD1O75127 700 aaKnown RBP9.42□□□□□ -0.9
CTNND1-234ENST00000532844 GTF2A1P52655 376 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-234ENST00000532844 GUCY1B3Q02153 619 aa9.42□□□□□ -0.9
CTNND1-234ENST00000532844 FLIIQ13045 1269 aa9.42□□□□□ -0.9
CTNND1-234ENST00000532844 RNF187Q5TA31 235 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-234ENST00000532844 DDX23Q9BUQ8 820 aaKnown RBP9.42□□□□□ -0.9
CTNND1-234ENST00000532844 BICRAQ9NZM4 1560 aa9.42□□□□□ -0.9
CTNND1-234ENST00000532844 EPB41L2O43491 1005 aaKnown RBP9.41□□□□□ -0.9
CTNND1-234ENST00000532844 ANO10Q9NW15 660 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 IRX3P78415 501 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-234ENST00000532844 BMP2KLQ5H9B9 411 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 FBXO31Q5XUX0 539 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-234ENST00000532844 TMOD3Q9NYL9 352 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 TTC22Q5TAA0 569 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 ANKRD36BQ8N2N9 1353 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 FAM83GA6ND36 823 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 HMGB1P09429 215 aaKnown RBP9.41□□□□□ -0.9
CTNND1-234ENST00000532844 DESP17661 470 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 KIAA1328Q86T90 577 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 C8orf76Q96K31 380 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 PRDM10Q9NQV6 1147 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 GJB2P29033 226 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 MNAT1P51948 309 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 EIF5P55010 431 aaKnown RBP9.41□□□□□ -0.9
CTNND1-234ENST00000532844 BMS1Q14692 1282 aaKnown RBP9.41□□□□□ -0.9
CTNND1-234ENST00000532844 PLCD3Q8N3E9 789 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 TBC1D32Q96NH3 1257 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 BMP2KQ9NSY1 1161 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-234ENST00000532844 HYPKQ9NX55 129 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 RALGAPBQ86X10 1494 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 ASXL1Q8IXJ9 1541 aa9.41□□□□□ -0.9
CTNND1-234ENST00000532844 TRERF1Q96PN7 1200 aa9.4□□□□□ -0.9
CTNND1-234ENST00000532844 C14orf93Q9H972 538 aaKnown RBP9.4□□□□□ -0.9
CTNND1-234ENST00000532844 MATR3P43243 847 aaKnown RBP eCLIP9.4□□□□□ -0.96e-7■■■■□ 22.1
CTNND1-234ENST00000532844 EVI5LQ96CN4 794 aa9.4□□□□□ -0.9
CTNND1-234ENST00000532844 FEZ1Q99689 392 aa9.4□□□□□ -0.9
CTNND1-234ENST00000532844 MAP3K2Q9Y2U5 619 aa9.4□□□□□ -0.9
CTNND1-234ENST00000532844 MINDY4BA8MYZ0 360 aa9.4□□□□□ -0.9
CTNND1-234ENST00000532844 SSR1P43307 286 aaKnown RBP9.4□□□□□ -0.9
CTNND1-234ENST00000532844 USP5P45974 858 aa9.4□□□□□ -0.9
CTNND1-234ENST00000532844 CBX1P83916 185 aa9.4□□□□□ -0.9
CTNND1-234ENST00000532844 CLIP2Q9UDT6 1046 aa9.4□□□□□ -0.9
CTNND1-234ENST00000532844 IL16Q14005 1332 aa9.4□□□□□ -0.9
CTNND1-234ENST00000532844 TTC21BQ7Z4L5 1316 aa9.4□□□□□ -0.9
CTNND1-234ENST00000532844 TSHZ3Q63HK5 1081 aa9.4□□□□□ -0.9
CTNND1-234ENST00000532844 DBF4Q9UBU7 674 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-234ENST00000532844 IDI1Q13907 227 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms