RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, human

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-222	ENST00000532504	DNTTIP2	Q5QJE6	756 aa	Known RBP	18.89	■□□□□ 0.61
PPFIA1-222	ENST00000532504	NLRP3	Q96P20	1036 aa		18.89	■□□□□ 0.61
PPFIA1-222	ENST00000532504	STK32B	Q9NY57	414 aa		18.89	■□□□□ 0.61
PPFIA1-222	ENST00000532504	TRAPPC3L	Q5T215	181 aa		18.88	■□□□□ 0.61
PPFIA1-222	ENST00000532504	SMC3	Q9UQE7	1217 aa		18.88	■□□□□ 0.61
PPFIA1-222	ENST00000532504	KIAA0232	Q92628	1395 aa		18.88	■□□□□ 0.61
PPFIA1-222	ENST00000532504	FAM182B	Q5T319	152 aa		18.88	■□□□□ 0.61
PPFIA1-222	ENST00000532504	AIDA	Q96BJ3	306 aa		18.88	■□□□□ 0.61
PPFIA1-222	ENST00000532504	DZIP1	Q86YF9	867 aa	Known RBP	18.88	■□□□□ 0.61
PPFIA1-222	ENST00000532504	PARP3	Q9Y6F1	533 aa		18.88	■□□□□ 0.61
PPFIA1-222	ENST00000532504	SPATA31E1	Q6ZUB1	1445 aa		18.88	■□□□□ 0.61
PPFIA1-222	ENST00000532504	ARAP3	Q8WWN8	1544 aa		18.87	■□□□□ 0.61
PPFIA1-222	ENST00000532504	ZNF790	Q6PG37	636 aa		18.87	■□□□□ 0.61
PPFIA1-222	ENST00000532504	CCDC152	Q4G0S7	254 aa		18.87	■□□□□ 0.61
PPFIA1-222	ENST00000532504	BRINP3	Q76B58	766 aa		18.87	■□□□□ 0.61
PPFIA1-222	ENST00000532504	NRDC	O43847	1150 aa		18.87	■□□□□ 0.61
PPFIA1-222	ENST00000532504	SNRK	Q9NRH2	765 aa		18.86	■□□□□ 0.61
PPFIA1-222	ENST00000532504	SYAP1	Q96A49	352 aa	Predicted RBP	18.86	■□□□□ 0.61
PPFIA1-222	ENST00000532504	NEK4	P51957	841 aa		18.86	■□□□□ 0.61
PPFIA1-222	ENST00000532504	KSR2	Q6VAB6	950 aa		18.86	■□□□□ 0.61
PPFIA1-222	ENST00000532504	TPTE2	Q6XPS3	522 aa		18.86	■□□□□ 0.61
PPFIA1-222	ENST00000532504	UTP14A	Q9BVJ6	771 aa	Known RBP	18.86	■□□□□ 0.61
PPFIA1-222	ENST00000532504	TRPC5	Q9UL62	973 aa	Predicted RBP	18.86	■□□□□ 0.61
PPFIA1-222	ENST00000532504	PRR36	Q9H6K5	1346 aa		18.85	■□□□□ 0.61
PPFIA1-222	ENST00000532504	SAFB	Q15424	915 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
PPFIA1-222	ENST00000532504	RAB11FIP3	O75154	756 aa		18.84	■□□□□ 0.61
PPFIA1-222	ENST00000532504	MX1	P20591	662 aa		18.84	■□□□□ 0.61
PPFIA1-222	ENST00000532504	USP5	P45974	858 aa		18.84	■□□□□ 0.61
PPFIA1-222	ENST00000532504	CWF19L2	Q2TBE0	894 aa	Known RBP	18.84	■□□□□ 0.61
PPFIA1-222	ENST00000532504	LMBR1L	Q6UX01	489 aa		18.84	■□□□□ 0.61
PPFIA1-222	ENST00000532504	ANKRD18A	Q8IVF6	992 aa		18.84	■□□□□ 0.61
PPFIA1-222	ENST00000532504	ATP6V1D	Q9Y5K8	247 aa		18.84	■□□□□ 0.61
PPFIA1-222	ENST00000532504	ABCA9	Q8IUA7	1624 aa		18.84	■□□□□ 0.61
PPFIA1-222	ENST00000532504	MEIS3	Q99687	375 aa		18.84	■□□□□ 0.61
PPFIA1-222	ENST00000532504	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	18.83	■□□□□ 0.61
PPFIA1-222	ENST00000532504	ATP2B1	P20020	1258 aa		18.83	■□□□□ 0.61
PPFIA1-222	ENST00000532504	A1BG	P04217	495 aa		18.83	■□□□□ 0.6
PPFIA1-222	ENST00000532504	PHAX	Q9H814	394 aa	Known RBP	18.83	■□□□□ 0.6
PPFIA1-222	ENST00000532504	BAG6	P46379	1132 aa		18.82	■□□□□ 0.6
PPFIA1-222	ENST00000532504	SLC52A2	Q9HAB3	445 aa		18.82	■□□□□ 0.6
PPFIA1-222	ENST00000532504	A2ML1	A8K2U0	1454 aa		18.82	■□□□□ 0.6
PPFIA1-222	ENST00000532504	NUP133	Q8WUM0	1156 aa		18.82	■□□□□ 0.6
PPFIA1-222	ENST00000532504	L1TD1	Q5T7N2	865 aa	Known RBP	18.82	■□□□□ 0.6
PPFIA1-222	ENST00000532504	DNAJC10	Q8IXB1	793 aa		18.82	■□□□□ 0.6
PPFIA1-222	ENST00000532504	MINDY4B	A8MYZ0	360 aa		18.81	■□□□□ 0.6
PPFIA1-222	ENST00000532504	MPHOSPH10	O00566	681 aa	Known RBP	18.81	■□□□□ 0.6
PPFIA1-222	ENST00000532504	GLRX3	O76003	335 aa	Known RBP	18.81	■□□□□ 0.6
PPFIA1-222	ENST00000532504	TTLL12	Q14166	644 aa	Predicted RBP	18.81	■□□□□ 0.6
PPFIA1-222	ENST00000532504	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	18.81	■□□□□ 0.6
PPFIA1-222	ENST00000532504	RXRB	P28702	533 aa		18.81	■□□□□ 0.6
PPFIA1-222	ENST00000532504	GRM8	O00222	908 aa		18.81	■□□□□ 0.6
PPFIA1-222	ENST00000532504	POLR3D	P05423	398 aa	Predicted RBP	18.81	■□□□□ 0.6
PPFIA1-222	ENST00000532504	ARHGAP31	Q2M1Z3	1444 aa		18.81	■□□□□ 0.6
PPFIA1-222	ENST00000532504	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	18.81	■□□□□ 0.6
PPFIA1-222	ENST00000532504	PLA2R1	Q13018	1463 aa		18.81	■□□□□ 0.6
PPFIA1-222	ENST00000532504	STK3	Q13188	491 aa		18.8	■□□□□ 0.6
PPFIA1-222	ENST00000532504	CCDC43	Q96MW1	224 aa	Known RBP	18.8	■□□□□ 0.6
PPFIA1-222	ENST00000532504	MAP3K12	Q12852	859 aa		18.8	■□□□□ 0.6
PPFIA1-222	ENST00000532504	CCDC24	Q8N4L8	307 aa		18.8	■□□□□ 0.6
PPFIA1-222	ENST00000532504	NYX	Q9GZU5	481 aa		18.79	■□□□□ 0.6
PPFIA1-222	ENST00000532504	KDM5C	P41229	1560 aa		18.79	■□□□□ 0.6
PPFIA1-222	ENST00000532504	IRS4	O14654	1257 aa	Predicted RBP	18.79	■□□□□ 0.6
PPFIA1-222	ENST00000532504	PTMS	P20962	102 aa		18.79	■□□□□ 0.6
PPFIA1-222	ENST00000532504	MRPL50	Q8N5N7	158 aa	Known RBP	18.79	■□□□□ 0.6
PPFIA1-222	ENST00000532504	MAP3K4	Q9Y6R4	1608 aa		18.79	■□□□□ 0.6
PPFIA1-222	ENST00000532504	ZNF772	Q68DY9	489 aa	Predicted RBP	18.79	■□□□□ 0.6
PPFIA1-222	ENST00000532504	PES1	O00541	588 aa	Known RBP	18.78	■□□□□ 0.6
PPFIA1-222	ENST00000532504	VAMP4	O75379	141 aa		18.78	■□□□□ 0.6
PPFIA1-222	ENST00000532504	SKAP1	Q86WV1	359 aa		18.78	■□□□□ 0.6
PPFIA1-222	ENST00000532504	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.78	■□□□□ 0.6
PPFIA1-222	ENST00000532504	XBP1	P17861	261 aa		18.78	■□□□□ 0.6
PPFIA1-222	ENST00000532504	ARHGEF25	Q86VW2	580 aa		18.78	■□□□□ 0.6
PPFIA1-222	ENST00000532504	ZNF496	Q96IT1	587 aa	Predicted RBP	18.78	■□□□□ 0.6
PPFIA1-222	ENST00000532504		F8W031	263 aa	Predicted RBP	18.77	■□□□□ 0.6
PPFIA1-222	ENST00000532504	TSHZ3	Q63HK5	1081 aa		18.77	■□□□□ 0.6
PPFIA1-222	ENST00000532504	HELB	Q8NG08	1087 aa	Predicted RBP	18.77	■□□□□ 0.6
PPFIA1-222	ENST00000532504	UBAC1	Q9BSL1	405 aa		18.77	■□□□□ 0.6
PPFIA1-222	ENST00000532504	BRMS1	Q9HCU9	246 aa		18.77	■□□□□ 0.6
PPFIA1-222	ENST00000532504	GOLIM4	O00461	696 aa		18.77	■□□□□ 0.6
PPFIA1-222	ENST00000532504	PIBF1	Q8WXW3	757 aa		18.77	■□□□□ 0.6
PPFIA1-222	ENST00000532504	LINS1	Q8NG48	757 aa		18.76	■□□□□ 0.59
PPFIA1-222	ENST00000532504	FAM89A	Q96GI7	184 aa		18.76	■□□□□ 0.59
PPFIA1-222	ENST00000532504	TRIM37	O94972	964 aa		18.76	■□□□□ 0.59
PPFIA1-222	ENST00000532504	SLC4A8	Q2Y0W8	1093 aa		18.76	■□□□□ 0.59
PPFIA1-222	ENST00000532504	DDX21	Q9NR30	783 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
PPFIA1-222	ENST00000532504	CTNNA3	Q9UI47	895 aa		18.76	■□□□□ 0.59
PPFIA1-222	ENST00000532504	CYP46A1	Q9Y6A2	500 aa		18.76	■□□□□ 0.59
PPFIA1-222	ENST00000532504	CCDC69	A6NI79	296 aa		18.76	■□□□□ 0.59
PPFIA1-222	ENST00000532504	CNBD1	Q8NA66	436 aa		18.76	■□□□□ 0.59
PPFIA1-222	ENST00000532504	TPM4	P67936	248 aa		18.76	■□□□□ 0.59
PPFIA1-222	ENST00000532504	CCDC87	Q9NVE4	849 aa		18.75	■□□□□ 0.59
PPFIA1-222	ENST00000532504	MYOM2	P54296	1465 aa		18.75	■□□□□ 0.59
PPFIA1-222	ENST00000532504	ALDH1L1	O75891	902 aa		18.75	■□□□□ 0.59
PPFIA1-222	ENST00000532504	PLXNC1	O60486	1568 aa		18.75	■□□□□ 0.59
PPFIA1-222	ENST00000532504	PHKG2	P15735	406 aa		18.75	■□□□□ 0.59
PPFIA1-222	ENST00000532504	CERK	Q8TCT0	537 aa		18.75	■□□□□ 0.59
PPFIA1-222	ENST00000532504	BICD2	Q8TD16	824 aa		18.75	■□□□□ 0.59
PPFIA1-222	ENST00000532504	MKNK2	Q9HBH9	465 aa		18.75	■□□□□ 0.59
PPFIA1-222	ENST00000532504	MSL1	Q68DK7	614 aa		18.74	■□□□□ 0.59
PPFIA1-222	ENST00000532504	PA2G4	Q9UQ80	394 aa	Known RBP	18.74	■□□□□ 0.59

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