RNA–Protein interactions for RNA: ENST00000525669.5

PABPC4-220, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-220ENST00000525669 HOXB7P09629 217 aa11.1□□□□□ -0.63
PABPC4-220ENST00000525669 PIP4K2AP48426 406 aaPredicted RBP11.1□□□□□ -0.63
PABPC4-220ENST00000525669 FLIIQ13045 1269 aa11.1□□□□□ -0.63
PABPC4-220ENST00000525669 FKBP5Q13451 457 aaPredicted RBP11.1□□□□□ -0.63
PABPC4-220ENST00000525669 SLC4A10Q6U841 1118 aa11.1□□□□□ -0.63
PABPC4-220ENST00000525669 MARCH10Q8NA82 808 aaPredicted RBP11.1□□□□□ -0.63
PABPC4-220ENST00000525669 PIGBQ92521 554 aa11.1□□□□□ -0.63
PABPC4-220ENST00000525669 SYTL4Q96C24 671 aaPredicted RBP11.1□□□□□ -0.63
PABPC4-220ENST00000525669 ACSBG1Q96GR2 724 aa11.1□□□□□ -0.63
PABPC4-220ENST00000525669 FMNL2Q96PY5 1086 aa11.1□□□□□ -0.63
PABPC4-220ENST00000525669 DDX19BQ9UMR2 479 aa11.1□□□□□ -0.63
PABPC4-220ENST00000525669 PCDHB15Q9Y5E8 787 aa11.1□□□□□ -0.63
PABPC4-220ENST00000525669 USP16Q9Y5T5 823 aa11.1□□□□□ -0.63
PABPC4-220ENST00000525669 AFDNP55196 1824 aaKnown RBP11.09□□□□□ -0.63
PABPC4-220ENST00000525669 ARFGEF2Q9Y6D5 1785 aa11.09□□□□□ -0.63
PABPC4-220ENST00000525669 SKAP1Q86WV1 359 aa11.09□□□□□ -0.63
PABPC4-220ENST00000525669 C1orf115Q9H7X2 142 aa11.09□□□□□ -0.63
PABPC4-220ENST00000525669 ASAP1Q9ULH1 1129 aa11.09□□□□□ -0.63
PABPC4-220ENST00000525669 BRWD3Q6RI45 1802 aa11.09□□□□□ -0.63
PABPC4-220ENST00000525669 KDM2BQ8NHM5 1336 aa11.09□□□□□ -0.63
PABPC4-220ENST00000525669 ZBTB7BO15156 539 aaPredicted RBP11.08□□□□□ -0.64
PABPC4-220ENST00000525669 SNRPA1P09661 255 aaKnown RBP11.08□□□□□ -0.64
PABPC4-220ENST00000525669 MYL6BP14649 208 aa11.08□□□□□ -0.64
PABPC4-220ENST00000525669 PRIM1P49642 420 aaKnown RBP11.08□□□□□ -0.64
PABPC4-220ENST00000525669 INTS3Q68E01 1043 aaKnown RBP11.08□□□□□ -0.64
PABPC4-220ENST00000525669 DBF4Q9UBU7 674 aaPredicted RBP11.08□□□□□ -0.64
PABPC4-220ENST00000525669 BCL9O00512 1426 aa11.08□□□□□ -0.64
PABPC4-220ENST00000525669 SBF2Q86WG5 1849 aa11.07□□□□□ -0.64
PABPC4-220ENST00000525669 NUP188Q5SRE5 1749 aa11.07□□□□□ -0.64
PABPC4-220ENST00000525669 NPM3O75607 178 aaKnown RBP11.07□□□□□ -0.64
PABPC4-220ENST00000525669 AIMP1Q12904 312 aaKnown RBP11.07□□□□□ -0.64
PABPC4-220ENST00000525669 PDIA6Q15084 440 aa11.07□□□□□ -0.64
PABPC4-220ENST00000525669 RBM42Q9BTD8 480 aaKnown RBP11.07□□□□□ -0.64
PABPC4-220ENST00000525669 ATG3Q9NT62 314 aa11.07□□□□□ -0.64
PABPC4-220ENST00000525669 ZBTB40Q9NUA8 1239 aa11.07□□□□□ -0.64
PABPC4-220ENST00000525669 ATRNO75882 1429 aa11.07□□□□□ -0.64
PABPC4-220ENST00000525669 FAM182BQ5T319 152 aa11.06□□□□□ -0.64
PABPC4-220ENST00000525669 GJD4Q96KN9 370 aaPredicted RBP11.06□□□□□ -0.64
PABPC4-220ENST00000525669 BTAF1O14981 1849 aa11.06□□□□□ -0.64
PABPC4-220ENST00000525669 ADCY9O60503 1353 aa11.05□□□□□ -0.64
PABPC4-220ENST00000525669 NHSQ6T4R5 1651 aa11.05□□□□□ -0.64
PABPC4-220ENST00000525669 CENPQQ7L2Z9 268 aaPredicted RBP11.05□□□□□ -0.64
PABPC4-220ENST00000525669 DDX21Q9NR30 783 aaKnown RBP eCLIP11.05□□□□□ -0.64
PABPC4-220ENST00000525669 PXDNLA1KZ92 1463 aa11.05□□□□□ -0.64
PABPC4-220ENST00000525669 PI4KAP2A4QPH2 592 aa11.04□□□□□ -0.64
PABPC4-220ENST00000525669 KCNQ2O43526 872 aa11.04□□□□□ -0.64
PABPC4-220ENST00000525669 A1BGP04217 495 aa11.04□□□□□ -0.64
PABPC4-220ENST00000525669 CCT4P50991 539 aaKnown RBP11.04□□□□□ -0.64
PABPC4-220ENST00000525669 AAMPQ13685 434 aa11.04□□□□□ -0.64
PABPC4-220ENST00000525669 DNAJC10Q8IXB1 793 aa11.04□□□□□ -0.64
PABPC4-220ENST00000525669 PELP1Q8IZL8 1130 aaKnown RBP11.04□□□□□ -0.64
PABPC4-220ENST00000525669 PI4KAP1Q8N8J0 262 aa11.04□□□□□ -0.64
PABPC4-220ENST00000525669 XAGE3Q8WTP9 111 aa11.04□□□□□ -0.64
PABPC4-220ENST00000525669 MEIS3Q99687 375 aa11.04□□□□□ -0.64
PABPC4-220ENST00000525669 CHMP4AQ9BY43 222 aa11.04□□□□□ -0.64
PABPC4-220ENST00000525669 QTRT2Q9H974 415 aaKnown RBP11.04□□□□□ -0.64
PABPC4-220ENST00000525669 HYPKQ9NX55 129 aa11.04□□□□□ -0.64
PABPC4-220ENST00000525669 TRPC5Q9UL62 973 aaPredicted RBP11.04□□□□□ -0.64
PABPC4-220ENST00000525669 MAP3K2Q9Y2U5 619 aa11.04□□□□□ -0.64
PABPC4-220ENST00000525669 NBPF26B4DH59 902 aa11.03□□□□□ -0.64
PABPC4-220ENST00000525669 NBPF14Q5TI25 921 aa11.03□□□□□ -0.64
PABPC4-220ENST00000525669 NBPF10Q6P3W6 841 aaKnown RBP11.03□□□□□ -0.64
PABPC4-220ENST00000525669 COPS6Q7L5N1 327 aa11.03□□□□□ -0.64
PABPC4-220ENST00000525669 NBPF15Q8N660 670 aa11.03□□□□□ -0.64
PABPC4-220ENST00000525669 DNAAF4Q8WXU2 420 aa11.03□□□□□ -0.64
PABPC4-220ENST00000525669 RWDD1Q9H446 243 aaPredicted RBP11.03□□□□□ -0.64
PABPC4-220ENST00000525669 COL5A3P25940 1745 aaPredicted RBP11.03□□□□□ -0.64
PABPC4-220ENST00000525669 PTF1AQ7RTS3 328 aa11.02□□□□□ -0.65
PABPC4-220ENST00000525669 LRP10Q7Z4F1 713 aa11.02□□□□□ -0.65
PABPC4-220ENST00000525669 SLC4A9Q96Q91 983 aa11.02□□□□□ -0.65
PABPC4-220ENST00000525669 BEND3Q5T5X7 828 aa11.01□□□□□ -0.65
PABPC4-220ENST00000525669 KSR2Q6VAB6 950 aa11.01□□□□□ -0.65
PABPC4-220ENST00000525669 RIC3Q7Z5B4 369 aa11.01□□□□□ -0.65
PABPC4-220ENST00000525669 SEPT12Q8IYM1 358 aa11.01□□□□□ -0.65
PABPC4-220ENST00000525669 SRCIN1Q9C0H9 1055 aa11.01□□□□□ -0.65
PABPC4-220ENST00000525669 CHMP4BQ9H444 224 aaKnown RBP11.01□□□□□ -0.65
PABPC4-220ENST00000525669 ATP10DQ9P241 1426 aa11.01□□□□□ -0.65
PABPC4-220ENST00000525669 CICQ96RK0 1608 aaPredicted RBP11□□□□□ -0.65
PABPC4-220ENST00000525669 CWF19L2Q2TBE0 894 aaKnown RBP11□□□□□ -0.65
PABPC4-220ENST00000525669 SIRT2Q8IXJ6 389 aa11□□□□□ -0.65
PABPC4-220ENST00000525669 ZNF330Q9Y3S2 320 aaPredicted RBP11□□□□□ -0.65
PABPC4-220ENST00000525669 RREB1Q92766 1687 aa11□□□□□ -0.65
PABPC4-220ENST00000525669 ANKRD36CQ5JPF3 1778 aa11□□□□□ -0.65
PABPC4-220ENST00000525669 LY75O60449 1722 aa10.99□□□□□ -0.65
PABPC4-220ENST00000525669 DDX58O95786 925 aaKnown RBP10.99□□□□□ -0.65
PABPC4-220ENST00000525669 RGS3P49796 1198 aa10.99□□□□□ -0.65
PABPC4-220ENST00000525669 HDAC1Q13547 482 aaPredicted RBP10.99□□□□□ -0.65
PABPC4-220ENST00000525669 TTLL7Q6ZT98 887 aa10.99□□□□□ -0.65
PABPC4-220ENST00000525669 MYD88Q99836 296 aa10.99□□□□□ -0.65
PABPC4-220ENST00000525669 USP44Q9H0E7 712 aa10.99□□□□□ -0.65
PABPC4-220ENST00000525669 PDZRN3Q9UPQ7 1066 aa10.99□□□□□ -0.65
PABPC4-220ENST00000525669 PALLDQ8WX93 1383 aa10.99□□□□□ -0.65
PABPC4-220ENST00000525669 ZNF831Q5JPB2 1677 aa10.98□□□□□ -0.65
PABPC4-220ENST00000525669 NUP98P52948 1817 aa10.98□□□□□ -0.65
PABPC4-220ENST00000525669 TAF1LQ8IZX4 1826 aa10.98□□□□□ -0.65
PABPC4-220ENST00000525669 CYP19A1P11511 503 aaPredicted RBP10.98□□□□□ -0.65
PABPC4-220ENST00000525669 KCNQ4P56696 695 aa10.98□□□□□ -0.65
PABPC4-220ENST00000525669 CEP85Q6P2H3 762 aa10.98□□□□□ -0.65
PABPC4-220ENST00000525669 ANKRD13DQ6ZTN6 518 aa10.98□□□□□ -0.65
PABPC4-220ENST00000525669 VSIG10Q8N0Z9 540 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms