RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 HSP90AB3PQ58FF7 597 aa14.29□□□□□ -0.12
SPIDR-217ENST00000522117 IQUBQ8NA54 791 aa14.29□□□□□ -0.12
SPIDR-217ENST00000522117 SUFUQ9UMX1 484 aa14.29□□□□□ -0.12
SPIDR-217ENST00000522117 RPAP1Q9BWH6 1393 aaPredicted RBP14.29□□□□□ -0.12
SPIDR-217ENST00000522117 HTATSF1O43719 755 aaKnown RBP14.28□□□□□ -0.12
SPIDR-217ENST00000522117 MAGEA9P43362 315 aa14.28□□□□□ -0.12
SPIDR-217ENST00000522117 REXO1L1PQ8IX06 675 aa14.28□□□□□ -0.12
SPIDR-217ENST00000522117 CACTINQ8WUQ7 758 aaKnown RBP14.28□□□□□ -0.12
SPIDR-217ENST00000522117 ERCC6LQ2NKX8 1250 aa14.28□□□□□ -0.12
SPIDR-217ENST00000522117 SWT1Q5T5J6 900 aaKnown RBP14.28□□□□□ -0.12
SPIDR-217ENST00000522117 DEPDC5O75140 1603 aa14.28□□□□□ -0.12
SPIDR-217ENST00000522117 CCDC189A1A4V9 331 aa14.28□□□□□ -0.12
SPIDR-217ENST00000522117 KIF1CO43896 1103 aaKnown RBP14.28□□□□□ -0.12
SPIDR-217ENST00000522117 TSR2Q969E8 191 aaKnown RBP14.28□□□□□ -0.12
SPIDR-217ENST00000522117 ZNF428Q96B54 188 aa14.28□□□□□ -0.12
SPIDR-217ENST00000522117 ADGRL1O94910 1474 aa14.27□□□□□ -0.12
SPIDR-217ENST00000522117 CCDC171Q6TFL3 1326 aa14.27□□□□□ -0.12
SPIDR-217ENST00000522117 EXOSC9Q06265 439 aaKnown RBP14.27□□□□□ -0.12
SPIDR-217ENST00000522117 FAM69CQ0P6D2 419 aa14.27□□□□□ -0.12
SPIDR-217ENST00000522117 E2F4Q16254 413 aa14.27□□□□□ -0.12
SPIDR-217ENST00000522117 CCDC91Q7Z6B0 441 aa14.27□□□□□ -0.12
SPIDR-217ENST00000522117 DEF6Q9H4E7 631 aa14.27□□□□□ -0.12
SPIDR-217ENST00000522117 ZCCHC17Q9NP64 241 aaKnown RBP14.27□□□□□ -0.12
SPIDR-217ENST00000522117 MED4Q9NPJ6 270 aa14.27□□□□□ -0.12
SPIDR-217ENST00000522117 AATKQ6ZMQ8 1374 aa14.27□□□□□ -0.13
SPIDR-217ENST00000522117 GPS2Q13227 327 aa14.27□□□□□ -0.13
SPIDR-217ENST00000522117 NBPF11Q86T75 865 aa14.27□□□□□ -0.13
SPIDR-217ENST00000522117 PLEKHM2Q8IWE5 1019 aa14.27□□□□□ -0.13
SPIDR-217ENST00000522117 SUGP1Q8IWZ8 645 aaKnown RBP14.27□□□□□ -0.13
SPIDR-217ENST00000522117 LRRN4CLQ8ND94 238 aa14.27□□□□□ -0.13
SPIDR-217ENST00000522117 CNPY2Q9Y2B0 182 aa14.27□□□□□ -0.13
SPIDR-217ENST00000522117 INO80Q9ULG1 1556 aaPredicted RBP14.26□□□□□ -0.13
SPIDR-217ENST00000522117 UBE2HP62256 183 aa14.26□□□□□ -0.13
SPIDR-217ENST00000522117 PTPN14Q15678 1187 aa14.26□□□□□ -0.13
SPIDR-217ENST00000522117 INTS3Q68E01 1043 aaKnown RBP14.26□□□□□ -0.13
SPIDR-217ENST00000522117 PLA2G4DQ86XP0 818 aa14.26□□□□□ -0.13
SPIDR-217ENST00000522117 ZFYVE16Q7Z3T8 1539 aa14.25□□□□□ -0.13
SPIDR-217ENST00000522117 TCHHQ07283 1943 aa14.25□□□□□ -0.13
SPIDR-217ENST00000522117 GOLIM4O00461 696 aa14.25□□□□□ -0.13
SPIDR-217ENST00000522117 NOM1Q5C9Z4 860 aaKnown RBP14.25□□□□□ -0.13
SPIDR-217ENST00000522117 TTC22Q5TAA0 569 aa14.25□□□□□ -0.13
SPIDR-217ENST00000522117 SIRT2Q8IXJ6 389 aa14.25□□□□□ -0.13
SPIDR-217ENST00000522117 INTS4Q96HW7 963 aaKnown RBP14.25□□□□□ -0.13
SPIDR-217ENST00000522117 PPRC1Q5VV67 1664 aaKnown RBP14.25□□□□□ -0.13
SPIDR-217ENST00000522117 ZNF75DP51815 510 aa14.25□□□□□ -0.13
SPIDR-217ENST00000522117 SRCIN1Q9C0H9 1055 aa14.25□□□□□ -0.13
SPIDR-217ENST00000522117 MED14O60244 1454 aa14.24□□□□□ -0.13
SPIDR-217ENST00000522117 TTC36A6NLP5 189 aa14.24□□□□□ -0.13
SPIDR-217ENST00000522117 CCDC144BQ3MJ40 725 aa14.24□□□□□ -0.13
SPIDR-217ENST00000522117 CCDC144CPQ8IYA2 1237 aa14.24□□□□□ -0.13
SPIDR-217ENST00000522117 OAS2P29728 719 aaKnown RBP14.24□□□□□ -0.13
SPIDR-217ENST00000522117 NEK4P51957 841 aa14.24□□□□□ -0.13
SPIDR-217ENST00000522117 MCTP2Q6DN12 878 aa14.24□□□□□ -0.13
SPIDR-217ENST00000522117 DRC7Q8IY82 874 aa14.24□□□□□ -0.13
SPIDR-217ENST00000522117 FAM200AQ8TCP9 573 aa14.24□□□□□ -0.13
SPIDR-217ENST00000522117 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.23□□□□□ -0.13
SPIDR-217ENST00000522117 RNF217Q8TC41 542 aa14.23□□□□□ -0.13
SPIDR-217ENST00000522117 C1orf115Q9H7X2 142 aa14.23□□□□□ -0.13
SPIDR-217ENST00000522117 L2HGDHQ9H9P8 463 aa14.23□□□□□ -0.13
SPIDR-217ENST00000522117 PSD3Q9NYI0 1048 aa14.23□□□□□ -0.13
SPIDR-217ENST00000522117 WDR33Q9C0J8 1336 aaKnown RBP14.23□□□□□ -0.13
SPIDR-217ENST00000522117 KIF3BO15066 747 aa14.23□□□□□ -0.13
SPIDR-217ENST00000522117 TDO2P48775 406 aa14.23□□□□□ -0.13
SPIDR-217ENST00000522117 LUZP1Q86V48 1076 aa14.23□□□□□ -0.13
SPIDR-217ENST00000522117 IQGAP1P46940 1657 aa14.23□□□□□ -0.13
SPIDR-217ENST00000522117 PLA2R1Q13018 1463 aa14.22□□□□□ -0.13
SPIDR-217ENST00000522117 MNS1Q8NEH6 495 aa14.22□□□□□ -0.13
SPIDR-217ENST00000522117 ZBTB7BO15156 539 aaPredicted RBP14.22□□□□□ -0.13
SPIDR-217ENST00000522117 CCDC192P0DO97 292 aa14.22□□□□□ -0.13
SPIDR-217ENST00000522117 ACTN2P35609 894 aa14.22□□□□□ -0.13
SPIDR-217ENST00000522117 MCM2P49736 904 aa14.22□□□□□ -0.13
SPIDR-217ENST00000522117 FAM212AQ96EL1 285 aa14.22□□□□□ -0.13
SPIDR-217ENST00000522117 SGSM3Q96HU1 749 aa14.22□□□□□ -0.13
SPIDR-217ENST00000522117 CARD14Q9BXL6 1004 aa14.22□□□□□ -0.13
SPIDR-217ENST00000522117 ZBTB12Q9Y330 459 aaPredicted RBP14.22□□□□□ -0.13
SPIDR-217ENST00000522117 ARHGAP29Q52LW3 1261 aa14.21□□□□□ -0.13
SPIDR-217ENST00000522117 CCDC93Q567U6 631 aa14.21□□□□□ -0.13
SPIDR-217ENST00000522117 EIF3CLB5ME19 914 aaKnown RBP14.21□□□□□ -0.13
SPIDR-217ENST00000522117 SASH3O75995 380 aa14.21□□□□□ -0.13
SPIDR-217ENST00000522117 TMCO3Q6UWJ1 677 aa14.21□□□□□ -0.13
SPIDR-217ENST00000522117 EXOC4Q96A65 974 aa14.21□□□□□ -0.13
SPIDR-217ENST00000522117 EIF3CQ99613 913 aaKnown RBP14.21□□□□□ -0.13
SPIDR-217ENST00000522117 MRVI1Q9Y6F6 885 aa14.21□□□□□ -0.13
SPIDR-217ENST00000522117 CEP152O94986 1710 aa14.21□□□□□ -0.14
SPIDR-217ENST00000522117 MAP2K1Q02750 393 aaPredicted RBP14.21□□□□□ -0.14
SPIDR-217ENST00000522117 AK7Q96M32 723 aa14.21□□□□□ -0.14
SPIDR-217ENST00000522117 ATP8B1O43520 1251 aa14.2□□□□□ -0.14
SPIDR-217ENST00000522117 SEC31AO94979 1220 aaKnown RBP14.2□□□□□ -0.14
SPIDR-217ENST00000522117 LRRC8AQ8IWT6 810 aa14.2□□□□□ -0.14
SPIDR-217ENST00000522117 TMTC2Q8N394 836 aa14.2□□□□□ -0.14
SPIDR-217ENST00000522117 CEP89Q96ST8 783 aa14.2□□□□□ -0.14
SPIDR-217ENST00000522117 SPHKAPQ2M3C7 1700 aa14.2□□□□□ -0.14
SPIDR-217ENST00000522117 RTL1A6NKG5 1358 aa14.2□□□□□ -0.14
SPIDR-217ENST00000522117 ATP6V1AP38606 617 aa14.2□□□□□ -0.14
SPIDR-217ENST00000522117 ARID5BQ14865 1188 aa14.2□□□□□ -0.14
SPIDR-217ENST00000522117 PPM1EQ8WY54 764 aa14.2□□□□□ -0.14
SPIDR-217ENST00000522117 RAI14Q9P0K7 980 aa14.2□□□□□ -0.14
SPIDR-217ENST00000522117 ELP1O95163 1332 aa14.19□□□□□ -0.14
SPIDR-217ENST00000522117 IPO8O15397 1037 aaKnown RBP14.19□□□□□ -0.14
SPIDR-217ENST00000522117 TBC1D8O95759 1140 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms