RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 KIAA1024Q9UPX6 916 aa6.91□□□□□ -1.3
CAST-242ENST00000515063 GPC6Q9Y625 555 aaPredicted RBP6.91□□□□□ -1.3
CAST-242ENST00000515063 FAM196BA6NMK8 535 aa6.9□□□□□ -1.3
CAST-242ENST00000515063 GPR25O00155 361 aa6.9□□□□□ -1.3
CAST-242ENST00000515063 ADAMTS2O95450 1211 aa6.9□□□□□ -1.3
CAST-242ENST00000515063 EPHA4P54764 986 aa6.9□□□□□ -1.3
CAST-242ENST00000515063 PSMA6P60900 246 aaKnown RBP6.9□□□□□ -1.3
CAST-242ENST00000515063 FOXK2Q01167 660 aa6.9□□□□□ -1.3
CAST-242ENST00000515063 GAS6Q14393 721 aa6.9□□□□□ -1.3
CAST-242ENST00000515063 TEAD4Q15561 434 aa6.9□□□□□ -1.3
CAST-242ENST00000515063 ARSJQ5FYB0 599 aaPredicted RBP6.9□□□□□ -1.3
CAST-242ENST00000515063 SVOPQ8N4V2 548 aa6.9□□□□□ -1.3
CAST-242ENST00000515063 ATXN7L1Q9ULK2 861 aaPredicted RBP6.9□□□□□ -1.3
CAST-242ENST00000515063 ZNF232Q9UNY5 417 aa6.9□□□□□ -1.3
CAST-242ENST00000515063 GJA3Q9Y6H8 435 aa6.9□□□□□ -1.3
CAST-242ENST00000515063 SERTM1A2A2V5 107 aa6.89□□□□□ -1.31
CAST-242ENST00000515063 ATP4AP20648 1035 aa6.89□□□□□ -1.31
CAST-242ENST00000515063 LORP23490 312 aaPredicted RBP6.89□□□□□ -1.31
CAST-242ENST00000515063 MAP2K3P46734 347 aa6.89□□□□□ -1.31
CAST-242ENST00000515063 MAP3K10Q02779 954 aa6.89□□□□□ -1.31
CAST-242ENST00000515063 BICDL1Q6ZP65 573 aa6.89□□□□□ -1.31
CAST-242ENST00000515063 TNS4Q8IZW8 715 aa6.89□□□□□ -1.31
CAST-242ENST00000515063 ZNF295-AS1Q8N0V1 137 aa6.89□□□□□ -1.31
CAST-242ENST00000515063 NOS2P35228 1153 aa6.88□□□□□ -1.31
CAST-242ENST00000515063 KANK4Q5T7N3 995 aaPredicted RBP6.88□□□□□ -1.31
CAST-242ENST00000515063 GAS2L2Q8NHY3 880 aa6.88□□□□□ -1.31
CAST-242ENST00000515063 L3MBTL2Q969R5 705 aa6.88□□□□□ -1.31
CAST-242ENST00000515063 ENAMQ9NRM1 1142 aa6.88□□□□□ -1.31
CAST-242ENST00000515063 IGF1RP08069 1367 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 A0A1W2PNR3 127 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 USP17L15C9J2P7 530 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 USP17L10C9JJH3 530 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 USP17L13C9JLJ4 530 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 USP17L12C9JPN9 530 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 USP17L11C9JVI0 530 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 USP17L21D6R901 530 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 USP17L18D6R9N7 530 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 USP17L22D6RA61 530 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 USP17L17D6RBQ6 530 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 USP17L19D6RCP7 530 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 USP17L20D6RJB6 530 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 USP17L24Q0WX57 530 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 PTK7Q13308 1070 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 CCDC97Q96F63 343 aaPredicted RBP6.87□□□□□ -1.31
CAST-242ENST00000515063 NEUROD4Q9HD90 331 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 PCDHGC4Q9Y5F7 938 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 USP3Q9Y6I4 520 aa6.87□□□□□ -1.31
CAST-242ENST00000515063 SFI1A8K8P3 1242 aa6.86□□□□□ -1.31
CAST-242ENST00000515063 PPP1R12BO60237 982 aaPredicted RBP6.86□□□□□ -1.31
CAST-242ENST00000515063 HIRAP54198 1017 aaPredicted RBP6.86□□□□□ -1.31
CAST-242ENST00000515063 CRTC2Q53ET0 693 aaPredicted RBP6.86□□□□□ -1.31
CAST-242ENST00000515063 CFAP70Q5T0N1 1121 aa6.86□□□□□ -1.31
CAST-242ENST00000515063 ERICH6Q7L0X2 663 aa6.86□□□□□ -1.31
CAST-242ENST00000515063 ANKMY2Q8IV38 441 aa6.86□□□□□ -1.31
CAST-242ENST00000515063 TSEN2Q8NCE0 465 aaKnown RBP6.86□□□□□ -1.31
CAST-242ENST00000515063 TSPAN10Q9H1Z9 355 aaPredicted RBP6.86□□□□□ -1.31
CAST-242ENST00000515063 LRRC4BQ9NT99 713 aa6.86□□□□□ -1.31
CAST-242ENST00000515063 RNF225M0QZC1 329 aaPredicted RBP6.85□□□□□ -1.31
CAST-242ENST00000515063 ATXN7O15265 892 aaPredicted RBP6.85□□□□□ -1.31
CAST-242ENST00000515063 RFX1P22670 979 aa6.85□□□□□ -1.31
CAST-242ENST00000515063 DPYDQ12882 1025 aa6.85□□□□□ -1.31
CAST-242ENST00000515063 HIF1AQ16665 826 aa6.85□□□□□ -1.31
CAST-242ENST00000515063 C1orf53Q5VUE5 145 aa6.85□□□□□ -1.31
CAST-242ENST00000515063 ZNF385CQ66K41 422 aaPredicted RBP6.85□□□□□ -1.31
CAST-242ENST00000515063 STAG2Q8N3U4 1231 aa6.85□□□□□ -1.31
CAST-242ENST00000515063 ZIC5Q96T25 663 aa6.85□□□□□ -1.31
CAST-242ENST00000515063 HINFPQ9BQA5 517 aa6.85□□□□□ -1.31
CAST-242ENST00000515063 PARP3Q9Y6F1 533 aa6.85□□□□□ -1.31
CAST-242ENST00000515063 EML1O00423 815 aa6.84□□□□□ -1.31
CAST-242ENST00000515063 DKK1O94907 266 aa6.84□□□□□ -1.31
CAST-242ENST00000515063 THBS1P07996 1170 aa6.84□□□□□ -1.31
CAST-242ENST00000515063 FAM157BP0CG42 384 aa6.84□□□□□ -1.31
CAST-242ENST00000515063 BMP4P12644 408 aa6.84□□□□□ -1.31
CAST-242ENST00000515063 FGFR3P22607 806 aa6.84□□□□□ -1.31
CAST-242ENST00000515063 UBAP2LQ14157 1087 aaKnown RBP6.84□□□□□ -1.31
CAST-242ENST00000515063 TBCELQ5QJ74 424 aa6.84□□□□□ -1.31
CAST-242ENST00000515063 SAMD5Q5TGI4 173 aa6.84□□□□□ -1.31
CAST-242ENST00000515063 FAM200AQ8TCP9 573 aa6.84□□□□□ -1.31
CAST-242ENST00000515063 RHPN1Q8TCX5 695 aa6.84□□□□□ -1.31
CAST-242ENST00000515063 ZDHHC1Q8WTX9 485 aa6.84□□□□□ -1.31
CAST-242ENST00000515063 ABHD17AQ96GS6 310 aa6.84□□□□□ -1.31
CAST-242ENST00000515063 ZCCHC2Q9C0B9 1178 aaKnown RBP6.84□□□□□ -1.31
CAST-242ENST00000515063 ANKIB1Q9P2G1 1089 aa6.84□□□□□ -1.31
CAST-242ENST00000515063 GDF2Q9UK05 429 aaPredicted RBP6.84□□□□□ -1.31
CAST-242ENST00000515063 SERPINA10Q9UK55 444 aa6.84□□□□□ -1.31
CAST-242ENST00000515063 BNIP3LO60238 219 aa6.83□□□□□ -1.32
CAST-242ENST00000515063 TXLNAP40222 546 aa6.83□□□□□ -1.32
CAST-242ENST00000515063 POTEAQ6S8J7 498 aa6.83□□□□□ -1.32
CAST-242ENST00000515063 SCG3Q8WXD2 468 aaKnown RBP6.83□□□□□ -1.32
CAST-242ENST00000515063 OXCT2Q9BYC2 517 aaPredicted RBP6.83□□□□□ -1.32
CAST-242ENST00000515063 NDFIP2Q9NV92 336 aa6.83□□□□□ -1.32
CAST-242ENST00000515063 ATAD2Q6PL18 1390 aa6.82□□□□□ -1.32
CAST-242ENST00000515063 KHNYNO15037 678 aaKnown RBP6.82□□□□□ -1.32
CAST-242ENST00000515063 CELA2BP08218 269 aaPredicted RBP6.82□□□□□ -1.32
CAST-242ENST00000515063 BCRP11274 1271 aa6.82□□□□□ -1.32
CAST-242ENST00000515063 IGFBP4P22692 258 aa6.82□□□□□ -1.32
CAST-242ENST00000515063 LAMC2Q13753 1193 aa6.82□□□□□ -1.32
CAST-242ENST00000515063 GOLGA6L1Q8N7Z2 621 aa6.82□□□□□ -1.32
CAST-242ENST00000515063 DCDC2BA2VCK2 349 aa6.81□□□□□ -1.32
CAST-242ENST00000515063 MARSP56192 900 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms