RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 SLC9A9Q8IVB4 645 aa9.38□□□□□ -0.91
PHF3-211ENST00000514822 ZNF295-AS1Q8N0V1 137 aa9.38□□□□□ -0.91
PHF3-211ENST00000514822 C1orf216Q8TAB5 229 aa9.38□□□□□ -0.91
PHF3-211ENST00000514822 CNTNAP3BQ96NU0 1288 aa9.38□□□□□ -0.91
PHF3-211ENST00000514822 CNTNAP3Q9BZ76 1288 aa9.38□□□□□ -0.91
PHF3-211ENST00000514822 ARID3CA6NKF2 412 aa9.37□□□□□ -0.91
PHF3-211ENST00000514822 EFHC2Q5JST6 749 aa9.37□□□□□ -0.91
PHF3-211ENST00000514822 ERICH6Q7L0X2 663 aa9.37□□□□□ -0.91
PHF3-211ENST00000514822 TSEN2Q8NCE0 465 aaKnown RBP9.37□□□□□ -0.91
PHF3-211ENST00000514822 TRERF1Q96PN7 1200 aa9.37□□□□□ -0.91
PHF3-211ENST00000514822 RUBCNLQ9H714 662 aa9.37□□□□□ -0.91
PHF3-211ENST00000514822 ZDHHC3Q9NYG2 299 aa9.37□□□□□ -0.91
PHF3-211ENST00000514822 TATP17735 454 aaPredicted RBP9.36□□□□□ -0.91
PHF3-211ENST00000514822 KRT76Q01546 638 aa9.36□□□□□ -0.91
PHF3-211ENST00000514822 DPYDQ12882 1025 aa9.36□□□□□ -0.91
PHF3-211ENST00000514822 TEAD4Q15561 434 aa9.36□□□□□ -0.91
PHF3-211ENST00000514822 ANKMY2Q8IV38 441 aa9.36□□□□□ -0.91
PHF3-211ENST00000514822 GTPBP3Q969Y2 492 aaKnown RBP9.36□□□□□ -0.91
PHF3-211ENST00000514822 CRISPLD1Q9H336 500 aa9.36□□□□□ -0.91
PHF3-211ENST00000514822 SERPINA10Q9UK55 444 aa9.36□□□□□ -0.91
PHF3-211ENST00000514822 CHMP3Q9Y3E7 222 aa9.36□□□□□ -0.91
PHF3-211ENST00000514822 GPR25O00155 361 aa9.35□□□□□ -0.91
PHF3-211ENST00000514822 NOS2P35228 1153 aa9.35□□□□□ -0.91
PHF3-211ENST00000514822 PSMA6P60900 246 aaKnown RBP9.35□□□□□ -0.91
PHF3-211ENST00000514822 CDCA8Q53HL2 280 aa9.35□□□□□ -0.91
PHF3-211ENST00000514822 RNFT1Q5M7Z0 435 aa9.35□□□□□ -0.91
PHF3-211ENST00000514822 TBCELQ5QJ74 424 aa9.35□□□□□ -0.91
PHF3-211ENST00000514822 TSPAN10Q9H1Z9 355 aaPredicted RBP9.35□□□□□ -0.91
PHF3-211ENST00000514822 ATP4AP20648 1035 aa9.34□□□□□ -0.91
PHF3-211ENST00000514822 ZSCAN1Q8NBB4 408 aa9.34□□□□□ -0.91
PHF3-211ENST00000514822 ZDHHC1Q8WTX9 485 aa9.34□□□□□ -0.91
PHF3-211ENST00000514822 L3MBTL2Q969R5 705 aa9.34□□□□□ -0.91
PHF3-211ENST00000514822 ZNF232Q9UNY5 417 aa9.34□□□□□ -0.91
PHF3-211ENST00000514822 PARP3Q9Y6F1 533 aa9.34□□□□□ -0.91
PHF3-211ENST00000514822 SERTM1A2A2V5 107 aa9.33□□□□□ -0.92
PHF3-211ENST00000514822 THBS1P07996 1170 aa9.32□□□□□ -0.92
PHF3-211ENST00000514822 ARSJQ5FYB0 599 aaPredicted RBP9.32□□□□□ -0.92
PHF3-211ENST00000514822 GAS2L2Q8NHY3 880 aa9.32□□□□□ -0.92
PHF3-211ENST00000514822 HINFPQ9BQA5 517 aa9.32□□□□□ -0.92
PHF3-211ENST00000514822 PHF24Q9UPV7 400 aa9.32□□□□□ -0.92
PHF3-211ENST00000514822 TXLNAP40222 546 aa9.31□□□□□ -0.92
PHF3-211ENST00000514822 GAS6Q14393 721 aa9.31□□□□□ -0.92
PHF3-211ENST00000514822 FIGNL1Q6PIW4 674 aa9.31□□□□□ -0.92
PHF3-211ENST00000514822 FAM200AQ8TCP9 573 aa9.31□□□□□ -0.92
PHF3-211ENST00000514822 ARXQ96QS3 562 aa9.31□□□□□ -0.92
PHF3-211ENST00000514822 CFHR5Q9BXR6 569 aa9.31□□□□□ -0.92
PHF3-211ENST00000514822 MBIPQ9NS73 344 aa9.31□□□□□ -0.92
PHF3-211ENST00000514822 ATAD2Q6PL18 1390 aa9.3□□□□□ -0.92
PHF3-211ENST00000514822 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.3□□□□□ -0.92
PHF3-211ENST00000514822 A0A1W2PNR3 127 aa9.3□□□□□ -0.92
PHF3-211ENST00000514822 EML1O00423 815 aa9.3□□□□□ -0.92
PHF3-211ENST00000514822 PPP1R12BO60237 982 aaPredicted RBP9.3□□□□□ -0.92
PHF3-211ENST00000514822 BICDL1Q6ZP65 573 aa9.3□□□□□ -0.92
PHF3-211ENST00000514822 NLRP8Q86W28 1048 aa9.3□□□□□ -0.92
PHF3-211ENST00000514822 SCG3Q8WXD2 468 aaKnown RBP9.3□□□□□ -0.92
PHF3-211ENST00000514822 STK17AQ9UEE5 414 aa9.3□□□□□ -0.92
PHF3-211ENST00000514822 FAM181BA6NEQ2 426 aa9.29□□□□□ -0.92
PHF3-211ENST00000514822 LORP23490 312 aaPredicted RBP9.29□□□□□ -0.92
PHF3-211ENST00000514822 SRSF11Q05519 484 aaKnown RBP9.29□□□□□ -0.92
PHF3-211ENST00000514822 UBAP2LQ14157 1087 aaKnown RBP9.29□□□□□ -0.92
PHF3-211ENST00000514822 ZIC5Q96T25 663 aa9.29□□□□□ -0.92
PHF3-211ENST00000514822 NOVA2Q9UNW9 492 aaKnown RBP9.29□□□□□ -0.92
PHF3-211ENST00000514822 GJA3Q9Y6H8 435 aa9.29□□□□□ -0.92
PHF3-211ENST00000514822 C21orf2O43822 256 aa9.28□□□□□ -0.92
PHF3-211ENST00000514822 MX2P20592 715 aa9.28□□□□□ -0.92
PHF3-211ENST00000514822 HIRAP54198 1017 aaPredicted RBP9.28□□□□□ -0.92
PHF3-211ENST00000514822 SRPK2P78362 688 aaKnown RBP9.28□□□□□ -0.92
PHF3-211ENST00000514822 ELOAQ14241 798 aaKnown RBP9.28□□□□□ -0.92
PHF3-211ENST00000514822 SH3PXD2AQ5TCZ1 1133 aa9.28□□□□□ -0.92
PHF3-211ENST00000514822 POTEAQ6S8J7 498 aa9.28□□□□□ -0.92
PHF3-211ENST00000514822 CCDC82Q8N4S0 544 aa9.28□□□□□ -0.92
PHF3-211ENST00000514822 PBXIP1Q96AQ6 731 aa9.28□□□□□ -0.92
PHF3-211ENST00000514822 ATXN7L1Q9ULK2 861 aaPredicted RBP9.28□□□□□ -0.92
PHF3-211ENST00000514822 NSFL1CQ9UNZ2 370 aaKnown RBP9.28□□□□□ -0.92
PHF3-211ENST00000514822 ADAMTS2O95450 1211 aa9.27□□□□□ -0.93
PHF3-211ENST00000514822 SLURP2P0DP57 97 aa9.27□□□□□ -0.93
PHF3-211ENST00000514822 IGFBP4P22692 258 aa9.27□□□□□ -0.93
PHF3-211ENST00000514822 STAG2Q8N3U4 1231 aa9.27□□□□□ -0.93
PHF3-211ENST00000514822 CHMP7Q8WUX9 453 aaPredicted RBP9.27□□□□□ -0.93
PHF3-211ENST00000514822 ZCCHC2Q9C0B9 1178 aaKnown RBP9.27□□□□□ -0.93
PHF3-211ENST00000514822 GPC6Q9Y625 555 aaPredicted RBP9.27□□□□□ -0.93
PHF3-211ENST00000514822 ATG7O95352 703 aa9.26□□□□□ -0.93
PHF3-211ENST00000514822 C1orf53Q5VUE5 145 aa9.26□□□□□ -0.93
PHF3-211ENST00000514822 RHPN1Q8TCX5 695 aa9.26□□□□□ -0.93
PHF3-211ENST00000514822 HCN4Q9Y3Q4 1203 aa9.26□□□□□ -0.93
PHF3-211ENST00000514822 PCDHGC4Q9Y5F7 938 aa9.26□□□□□ -0.93
PHF3-211ENST00000514822 IGF1RP08069 1367 aa9.25□□□□□ -0.93
PHF3-211ENST00000514822 ATXN7O15265 892 aaPredicted RBP9.25□□□□□ -0.93
PHF3-211ENST00000514822 BNIP3LO60238 219 aa9.25□□□□□ -0.93
PHF3-211ENST00000514822 LGR5O75473 907 aa9.25□□□□□ -0.93
PHF3-211ENST00000514822 ABHD17AQ96GS6 310 aa9.25□□□□□ -0.93
PHF3-211ENST00000514822 C2orf49Q9BVC5 232 aaPredicted RBP9.25□□□□□ -0.93
PHF3-211ENST00000514822 PHACTR1Q9C0D0 580 aa9.25□□□□□ -0.93
PHF3-211ENST00000514822 C1orf115Q9H7X2 142 aa9.25□□□□□ -0.93
PHF3-211ENST00000514822 NEUROD4Q9HD90 331 aa9.25□□□□□ -0.93
PHF3-211ENST00000514822 NDFIP2Q9NV92 336 aa9.25□□□□□ -0.93
PHF3-211ENST00000514822 ZMIZ1Q9ULJ6 1067 aa9.25□□□□□ -0.93
PHF3-211ENST00000514822 SWI5Q1ZZU3 235 aa9.24□□□□□ -0.93
PHF3-211ENST00000514822 FGFR3P22607 806 aa9.23□□□□□ -0.93
PHF3-211ENST00000514822 MAP2K3P46734 347 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms