RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 TEFQ10587 303 aa17.86■□□□□ 0.45
DDR1-271ENST00000513240 CWF19L2Q2TBE0 894 aaKnown RBP17.86■□□□□ 0.45
DDR1-271ENST00000513240 CABLES1Q8TDN4 633 aa17.86■□□□□ 0.45
DDR1-271ENST00000513240 AXIN2Q9Y2T1 843 aa17.86■□□□□ 0.45
DDR1-271ENST00000513240 ARHGEF10O15013 1369 aa17.86■□□□□ 0.45
DDR1-271ENST00000513240 ZSCAN20P17040 1043 aaPredicted RBP17.85■□□□□ 0.45
DDR1-271ENST00000513240 OS9Q13438 667 aaPredicted RBP17.85■□□□□ 0.45
DDR1-271ENST00000513240 CAVIN1Q6NZI2 390 aaKnown RBP17.85■□□□□ 0.45
DDR1-271ENST00000513240 GDPD2Q9HCC8 539 aa17.85■□□□□ 0.45
DDR1-271ENST00000513240 MON2Q7Z3U7 1717 aa17.85■□□□□ 0.45
DDR1-271ENST00000513240 BTBD11A6QL63 1104 aa17.85■□□□□ 0.45
DDR1-271ENST00000513240 HAP1P54257 671 aaPredicted RBP17.85■□□□□ 0.45
DDR1-271ENST00000513240 ATP8B2P98198 1209 aa17.85■□□□□ 0.45
DDR1-271ENST00000513240 ITSN1Q15811 1721 aa17.85■□□□□ 0.45
DDR1-271ENST00000513240 TERF1P54274 439 aa17.85■□□□□ 0.45
DDR1-271ENST00000513240 RABEP1Q15276 862 aa17.85■□□□□ 0.45
DDR1-271ENST00000513240 SOS1Q07889 1333 aaPredicted RBP17.84■□□□□ 0.45
DDR1-271ENST00000513240 ANP32BQ92688 251 aaKnown RBP17.84■□□□□ 0.45
DDR1-271ENST00000513240 PPP1R9BQ96SB3 815 aa17.84■□□□□ 0.45
DDR1-271ENST00000513240 PPP4R3BQ5MIZ7 849 aa17.84■□□□□ 0.45
DDR1-271ENST00000513240 SPG7Q9UQ90 795 aa17.84■□□□□ 0.45
DDR1-271ENST00000513240 KLHDC4Q8TBB5 520 aa17.83■□□□□ 0.45
DDR1-271ENST00000513240 NSFL1CQ9UNZ2 370 aaKnown RBP17.83■□□□□ 0.45
DDR1-271ENST00000513240 KIF13AQ9H1H9 1805 aa17.83■□□□□ 0.44
DDR1-271ENST00000513240 MAP3K5Q99683 1374 aa17.83■□□□□ 0.44
DDR1-271ENST00000513240 VGLL3A8MV65 326 aa17.82■□□□□ 0.44
DDR1-271ENST00000513240 MYL6BP14649 208 aa17.82■□□□□ 0.44
DDR1-271ENST00000513240 SIL1Q9H173 461 aa17.82■□□□□ 0.44
DDR1-271ENST00000513240 GNAI3P08754 354 aa17.82■□□□□ 0.44
DDR1-271ENST00000513240 UTP14CQ5TAP6 766 aaKnown RBP17.82■□□□□ 0.44
DDR1-271ENST00000513240 SRCIN1Q9C0H9 1055 aa17.82■□□□□ 0.44
DDR1-271ENST00000513240 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.82■□□□□ 0.44
DDR1-271ENST00000513240 ESYT1Q9BSJ8 1104 aa17.81■□□□□ 0.44
DDR1-271ENST00000513240 ZDHHC9Q9Y397 364 aa17.81■□□□□ 0.44
DDR1-271ENST00000513240 REREQ9P2R6 1566 aa17.81■□□□□ 0.44
DDR1-271ENST00000513240 EIF4A1P60842 406 aaKnown RBP17.81■□□□□ 0.44
DDR1-271ENST00000513240 CWC27Q6UX04 472 aaKnown RBP17.81■□□□□ 0.44
DDR1-271ENST00000513240 MPNDQ8N594 471 aa17.81■□□□□ 0.44
DDR1-271ENST00000513240 REC8O95072 547 aa17.81■□□□□ 0.44
DDR1-271ENST00000513240 CHMLP26374 656 aa17.81■□□□□ 0.44
DDR1-271ENST00000513240 ST18O60284 1047 aa17.8■□□□□ 0.44
DDR1-271ENST00000513240 ANKLE2Q86XL3 938 aa17.8■□□□□ 0.44
DDR1-271ENST00000513240 AKAP12Q02952 1782 aa17.8■□□□□ 0.44
DDR1-271ENST00000513240 KDRP35968 1356 aa17.8■□□□□ 0.44
DDR1-271ENST00000513240 GCP02774 474 aa17.8■□□□□ 0.44
DDR1-271ENST00000513240 TMX3Q96JJ7 454 aa17.8■□□□□ 0.44
DDR1-271ENST00000513240 CCDC94Q9BW85 323 aaPredicted RBP17.8■□□□□ 0.44
DDR1-271ENST00000513240 DYNC1I1O14576 645 aa17.79■□□□□ 0.44
DDR1-271ENST00000513240 CBX1P83916 185 aa17.79■□□□□ 0.44
DDR1-271ENST00000513240 CHRNA2Q15822 529 aa17.79■□□□□ 0.44
DDR1-271ENST00000513240 IP6K1Q92551 441 aa17.79■□□□□ 0.44
DDR1-271ENST00000513240 NCOA3Q9Y6Q9 1424 aa17.79■□□□□ 0.44
DDR1-271ENST00000513240 DIP2AQ14689 1571 aa17.79■□□□□ 0.44
DDR1-271ENST00000513240 MTERF4Q7Z6M4 381 aaKnown RBP17.79■□□□□ 0.44
DDR1-271ENST00000513240 MAP3K2Q9Y2U5 619 aa17.79■□□□□ 0.44
DDR1-271ENST00000513240 TSC1Q92574 1164 aa17.78■□□□□ 0.44
DDR1-271ENST00000513240 NDUFB9Q9Y6M9 179 aa17.78■□□□□ 0.44
DDR1-271ENST00000513240 ANKRD24Q8TF21 1146 aa17.78■□□□□ 0.44
DDR1-271ENST00000513240 RHPN1Q8TCX5 695 aa17.77■□□□□ 0.44
DDR1-271ENST00000513240 C9orf78Q9NZ63 289 aaPredicted RBP17.77■□□□□ 0.44
DDR1-271ENST00000513240 DNAAF4Q8WXU2 420 aa17.77■□□□□ 0.44
DDR1-271ENST00000513240 NLRP2Q9NX02 1062 aa17.77■□□□□ 0.44
DDR1-271ENST00000513240 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.77■□□□□ 0.44
DDR1-271ENST00000513240 COL9A3Q14050 684 aaPredicted RBP17.77■□□□□ 0.43
DDR1-271ENST00000513240 PLCD3Q8N3E9 789 aa17.77■□□□□ 0.43
DDR1-271ENST00000513240 RNF214Q8ND24 703 aa17.76■□□□□ 0.43
DDR1-271ENST00000513240 CCDC8Q9H0W5 538 aaPredicted RBP17.76■□□□□ 0.43
DDR1-271ENST00000513240 C1orf141Q5JVX7 400 aa17.76■□□□□ 0.43
DDR1-271ENST00000513240 TMEM51Q9NW97 253 aa17.75■□□□□ 0.43
DDR1-271ENST00000513240 CIZ1Q9ULV3 898 aaPredicted RBP17.75■□□□□ 0.43
DDR1-271ENST00000513240 KIF24Q5T7B8 1368 aa17.75■□□□□ 0.43
DDR1-271ENST00000513240 GOLGA6L22H0YM25 854 aa17.75■□□□□ 0.43
DDR1-271ENST00000513240 TCEANC2Q96MN5 208 aa17.75■□□□□ 0.43
DDR1-271ENST00000513240 CHGBP05060 677 aa17.74■□□□□ 0.43
DDR1-271ENST00000513240 BEND3Q5T5X7 828 aa17.74■□□□□ 0.43
DDR1-271ENST00000513240 RASEFQ8IZ41 740 aa17.74■□□□□ 0.43
DDR1-271ENST00000513240 IBTKQ9P2D0 1353 aaPredicted RBP17.74■□□□□ 0.43
DDR1-271ENST00000513240 NOL7Q9UMY1 257 aaKnown RBP17.74■□□□□ 0.43
DDR1-271ENST00000513240 PROSER2Q86WR7 435 aaPredicted RBP17.73■□□□□ 0.43
DDR1-271ENST00000513240 GPT2Q8TD30 523 aa17.73■□□□□ 0.43
DDR1-271ENST00000513240 EDC3Q96F86 508 aaKnown RBP17.73■□□□□ 0.43
DDR1-271ENST00000513240 ZBTB22O15209 634 aa17.73■□□□□ 0.43
DDR1-271ENST00000513240 ZNF500O60304 480 aaPredicted RBP17.73■□□□□ 0.43
DDR1-271ENST00000513240 LMBRD1Q9NUN5 540 aa17.73■□□□□ 0.43
DDR1-271ENST00000513240 PIK3C2AO00443 1686 aa17.73■□□□□ 0.43
DDR1-271ENST00000513240 IGSF3O75054 1194 aa17.73■□□□□ 0.43
DDR1-271ENST00000513240 SALL3Q9BXA9 1300 aa17.72■□□□□ 0.43
DDR1-271ENST00000513240 RNMTO43148 476 aaKnown RBP17.72■□□□□ 0.43
DDR1-271ENST00000513240 CSB-PGBD3P0DP91 1061 aa17.72■□□□□ 0.43
DDR1-271ENST00000513240 SKOR2Q2VWA4 1001 aaPredicted RBP17.72■□□□□ 0.43
DDR1-271ENST00000513240 NFATC2IPQ8NCF5 419 aa17.72■□□□□ 0.43
DDR1-271ENST00000513240 NRKQ7Z2Y5 1582 aa17.71■□□□□ 0.43
DDR1-271ENST00000513240 PLEKHO1Q53GL0 409 aaPredicted RBP17.71■□□□□ 0.43
DDR1-271ENST00000513240 SASS6Q6UVJ0 657 aa17.71■□□□□ 0.43
DDR1-271ENST00000513240 KRT28Q7Z3Y7 464 aa17.71■□□□□ 0.43
DDR1-271ENST00000513240 TLR7Q9NYK1 1049 aaKnown RBP17.71■□□□□ 0.43
DDR1-271ENST00000513240 SYCE3A1L190 88 aa17.71■□□□□ 0.43
DDR1-271ENST00000513240 SSH3Q8TE77 659 aa17.71■□□□□ 0.43
DDR1-271ENST00000513240 PRIM1P49642 420 aaKnown RBP17.7■□□□□ 0.42
DDR1-271ENST00000513240 OSBPL3Q9H4L5 887 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms