RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	DPY19L2	Q6NUT2	758 aa		11.97	□□□□□ -0.49
RACK1-222	ENST00000509535	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
RACK1-222	ENST00000509535	POLRMT	O00411	1230 aa	Known RBP	11.96	□□□□□ -0.49
RACK1-222	ENST00000509535	POTEI	P0CG38	1075 aa		11.96	□□□□□ -0.49
RACK1-222	ENST00000509535	POTEJ	P0CG39	1038 aa		11.96	□□□□□ -0.49
RACK1-222	ENST00000509535	VEGFB	P49765	207 aa		11.96	□□□□□ -0.49
RACK1-222	ENST00000509535	WBP1L	Q9NX94	342 aa		11.96	□□□□□ -0.49
RACK1-222	ENST00000509535	ANKRD31	Q8N7Z5	1873 aa		11.95	□□□□□ -0.5
RACK1-222	ENST00000509535	NFKBIE	O00221	500 aa		11.95	□□□□□ -0.5
RACK1-222	ENST00000509535	EMILIN1	Q9Y6C2	1016 aa		11.95	□□□□□ -0.5
RACK1-222	ENST00000509535	CCDC85C	A6NKD9	419 aa		11.94	□□□□□ -0.5
RACK1-222	ENST00000509535	TM4SF1	P30408	202 aa		11.94	□□□□□ -0.5
RACK1-222	ENST00000509535	CRKL	P46109	303 aa	Known RBP	11.94	□□□□□ -0.5
RACK1-222	ENST00000509535	TTLL6	Q8N841	843 aa		11.94	□□□□□ -0.5
RACK1-222	ENST00000509535	PASK	Q96RG2	1323 aa		11.93	□□□□□ -0.5
RACK1-222	ENST00000509535	ERVV-2	B6SEH9	535 aa		11.93	□□□□□ -0.5
RACK1-222	ENST00000509535	HSPA8	P11142	646 aa	Known RBP	11.93	□□□□□ -0.5
RACK1-222	ENST00000509535	RGS19	P49795	217 aa		11.93	□□□□□ -0.5
RACK1-222	ENST00000509535	EYA1	Q99502	592 aa		11.93	□□□□□ -0.5
RACK1-222	ENST00000509535	COL11A2	P13942	1736 aa	Predicted RBP	11.93	□□□□□ -0.5
RACK1-222	ENST00000509535	CASP8AP2	Q9UKL3	1982 aa		11.92	□□□□□ -0.5
RACK1-222	ENST00000509535	PPM1G	O15355	546 aa	Predicted RBP	11.92	□□□□□ -0.5
RACK1-222	ENST00000509535	PTCD1	O75127	700 aa	Known RBP	11.92	□□□□□ -0.5
RACK1-222	ENST00000509535	ERFE	Q4G0M1	354 aa		11.92	□□□□□ -0.5
RACK1-222	ENST00000509535	TMEM88B	A6NKF7	163 aa		11.91	□□□□□ -0.5
RACK1-222	ENST00000509535	ZPR1	O75312	459 aa		11.91	□□□□□ -0.5
RACK1-222	ENST00000509535	TESK2	Q96S53	571 aa		11.91	□□□□□ -0.5
RACK1-222	ENST00000509535	SCN11A	Q9UI33	1791 aa		11.91	□□□□□ -0.5
RACK1-222	ENST00000509535	ARFGEF2	Q9Y6D5	1785 aa		11.91	□□□□□ -0.5
RACK1-222	ENST00000509535	SLX4	Q8IY92	1834 aa		11.9	□□□□□ -0.5
RACK1-222	ENST00000509535	DDN	O94850	711 aa	Predicted RBP	11.9	□□□□□ -0.5
RACK1-222	ENST00000509535	USPL1	Q5W0Q7	1092 aa		11.9	□□□□□ -0.5
RACK1-222	ENST00000509535	C2CD5	Q86YS7	1000 aa		11.9	□□□□□ -0.5
RACK1-222	ENST00000509535	ADAMTSL1	Q8N6G6	1762 aa		11.9	□□□□□ -0.51
RACK1-222	ENST00000509535	TRPM7	Q96QT4	1865 aa		11.89	□□□□□ -0.51
RACK1-222	ENST00000509535		H0YIN7	160 aa		11.89	□□□□□ -0.51
RACK1-222	ENST00000509535	CABP4	P57796	275 aa		11.89	□□□□□ -0.51
RACK1-222	ENST00000509535	NFIX	Q14938	502 aa		11.89	□□□□□ -0.51
RACK1-222	ENST00000509535	LDHD	Q86WU2	507 aa		11.89	□□□□□ -0.51
RACK1-222	ENST00000509535	THSD7B	Q9C0I4	1608 aa		11.89	□□□□□ -0.51
RACK1-222	ENST00000509535	WASHC2A	Q641Q2	1341 aa		11.88	□□□□□ -0.51
RACK1-222	ENST00000509535	ST20-MTHFS	A0A0A6YYL1	179 aa		11.88	□□□□□ -0.51
RACK1-222	ENST00000509535	ITGBL1	O95965	494 aa	Predicted RBP	11.88	□□□□□ -0.51
RACK1-222	ENST00000509535	SERPINB2	P05120	415 aa		11.88	□□□□□ -0.51
RACK1-222	ENST00000509535	MAP2K1	Q02750	393 aa	Predicted RBP	11.88	□□□□□ -0.51
RACK1-222	ENST00000509535	INTS5	Q6P9B9	1019 aa	Known RBP	11.88	□□□□□ -0.51
RACK1-222	ENST00000509535	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.88	□□□□□ -0.51
RACK1-222	ENST00000509535	CARMIL3	Q8ND23	1372 aa		11.88	□□□□□ -0.51
RACK1-222	ENST00000509535	IQCA1L	A6NCM1	817 aa		11.87	□□□□□ -0.51
RACK1-222	ENST00000509535	RASSF10	A6NK89	507 aa		11.87	□□□□□ -0.51
RACK1-222	ENST00000509535	C21orf2	O43822	256 aa		11.87	□□□□□ -0.51
RACK1-222	ENST00000509535	HSP90AB1	P08238	724 aa	Known RBP	11.87	□□□□□ -0.51
RACK1-222	ENST00000509535	ZEB1	P37275	1124 aa	Predicted RBP	11.87	□□□□□ -0.51
RACK1-222	ENST00000509535	DEFB115	Q30KQ5	88 aa		11.87	□□□□□ -0.51
RACK1-222	ENST00000509535	WDR33	Q9C0J8	1336 aa	Known RBP	11.86	□□□□□ -0.51
RACK1-222	ENST00000509535	CFAP44	Q96MT7	982 aa		11.86	□□□□□ -0.51
RACK1-222	ENST00000509535	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.86	□□□□□ -0.51
RACK1-222	ENST00000509535	SOS1	Q07889	1333 aa	Predicted RBP	11.86	□□□□□ -0.51
RACK1-222	ENST00000509535	COL15A1	P39059	1388 aa		11.85	□□□□□ -0.51
RACK1-222	ENST00000509535	EAPP	Q56P03	285 aa	Predicted RBP	11.85	□□□□□ -0.51
RACK1-222	ENST00000509535	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.85	□□□□□ -0.51
RACK1-222	ENST00000509535	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
RACK1-222	ENST00000509535	TAOK3	Q9H2K8	898 aa		11.85	□□□□□ -0.51
RACK1-222	ENST00000509535	NARF	Q9UHQ1	456 aa		11.85	□□□□□ -0.51
RACK1-222	ENST00000509535	LTBP3	Q9NS15	1303 aa		11.85	□□□□□ -0.51
RACK1-222	ENST00000509535	LTBP1	Q14766	1721 aa		11.84	□□□□□ -0.51
RACK1-222	ENST00000509535	SLC24A1	O60721	1099 aa		11.84	□□□□□ -0.51
RACK1-222	ENST00000509535	NFATC2IP	Q8NCF5	419 aa		11.84	□□□□□ -0.51
RACK1-222	ENST00000509535	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.84	□□□□□ -0.51
RACK1-222	ENST00000509535	CLEC11A	Q9Y240	323 aa		11.84	□□□□□ -0.51
RACK1-222	ENST00000509535	MTHFS	P49914	203 aa		11.83	□□□□□ -0.52
RACK1-222	ENST00000509535	EIF4A2	Q14240	407 aa	Known RBP	11.83	□□□□□ -0.52
RACK1-222	ENST00000509535	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.83	□□□□□ -0.52
RACK1-222	ENST00000509535	DNAJC10	Q8IXB1	793 aa		11.83	□□□□□ -0.52
RACK1-222	ENST00000509535	BEGAIN	Q9BUH8	593 aa		11.83	□□□□□ -0.52
RACK1-222	ENST00000509535	BCL2L12	Q9HB09	334 aa		11.83	□□□□□ -0.52
RACK1-222	ENST00000509535	ABT1	Q9ULW3	272 aa	Known RBP	11.83	□□□□□ -0.52
RACK1-222	ENST00000509535	SCN7A	Q01118	1682 aa		11.82	□□□□□ -0.52
RACK1-222	ENST00000509535	CARD14	Q9BXL6	1004 aa		11.82	□□□□□ -0.52
RACK1-222	ENST00000509535	MAP1S	Q66K74	1059 aa	Predicted RBP	11.81	□□□□□ -0.52
RACK1-222	ENST00000509535	BICDL1	Q6ZP65	573 aa		11.81	□□□□□ -0.52
RACK1-222	ENST00000509535	CNTROB	Q8N137	903 aa		11.81	□□□□□ -0.52
RACK1-222	ENST00000509535	POLK	Q9UBT6	870 aa		11.81	□□□□□ -0.52
RACK1-222	ENST00000509535	UBR2	Q8IWV8	1755 aa		11.8	□□□□□ -0.52
RACK1-222	ENST00000509535	CYP19A1	P11511	503 aa	Predicted RBP	11.8	□□□□□ -0.52
RACK1-222	ENST00000509535	PDE6B	P35913	854 aa		11.8	□□□□□ -0.52
RACK1-222	ENST00000509535	AMOT	Q4VCS5	1084 aa		11.8	□□□□□ -0.52
RACK1-222	ENST00000509535	C1orf141	Q5JVX7	400 aa		11.8	□□□□□ -0.52
RACK1-222	ENST00000509535	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.8	□□□□□ -0.52
RACK1-222	ENST00000509535	CAPNS2	Q96L46	248 aa		11.8	□□□□□ -0.52
RACK1-222	ENST00000509535	BRIP1	Q9BX63	1249 aa		11.8	□□□□□ -0.52
RACK1-222	ENST00000509535	MCOLN1	Q9GZU1	580 aa		11.8	□□□□□ -0.52
RACK1-222	ENST00000509535	HACL1	Q9UJ83	578 aa		11.8	□□□□□ -0.52
RACK1-222	ENST00000509535	TSKS	Q9UJT2	592 aa		11.8	□□□□□ -0.52
RACK1-222	ENST00000509535	PDZRN3	Q9UPQ7	1066 aa		11.8	□□□□□ -0.52
RACK1-222	ENST00000509535	EPHX2	P34913	555 aa		11.79	□□□□□ -0.52
RACK1-222	ENST00000509535	GRM1	Q13255	1194 aa		11.79	□□□□□ -0.52
RACK1-222	ENST00000509535	CCDC24	Q8N4L8	307 aa		11.79	□□□□□ -0.52
RACK1-222	ENST00000509535	ZBTB1	Q9Y2K1	713 aa		11.79	□□□□□ -0.52
RACK1-222	ENST00000509535	ZNF541	Q9H0D2	1346 aa		11.79	□□□□□ -0.52

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