RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 ST20-MTHFSA0A0A6YYL1 179 aa8.1□□□□□ -1.11
KDM3B-205ENST00000508386 PHKG2P15735 406 aa8.1□□□□□ -1.11
KDM3B-205ENST00000508386 HMGB2P26583 209 aaKnown RBP8.1□□□□□ -1.11
KDM3B-205ENST00000508386 RASSF7Q02833 373 aa8.1□□□□□ -1.11
KDM3B-205ENST00000508386 GSE1Q14687 1217 aa8.1□□□□□ -1.11
KDM3B-205ENST00000508386 RC3H1Q5TC82 1133 aaKnown RBP8.1□□□□□ -1.11
KDM3B-205ENST00000508386 SMC1BQ8NDV3 1235 aa8.1□□□□□ -1.11
KDM3B-205ENST00000508386 EYA1Q99502 592 aa8.1□□□□□ -1.11
KDM3B-205ENST00000508386 CARD14Q9BXL6 1004 aa8.1□□□□□ -1.11
KDM3B-205ENST00000508386 CCDC87Q9NVE4 849 aa8.1□□□□□ -1.11
KDM3B-205ENST00000508386 TMOD3Q9NYL9 352 aa8.1□□□□□ -1.11
KDM3B-205ENST00000508386 PIM2Q9P1W9 311 aa8.1□□□□□ -1.11
KDM3B-205ENST00000508386 SRP68Q9UHB9 627 aaKnown RBP8.1□□□□□ -1.11
KDM3B-205ENST00000508386 RTCBQ9Y3I0 505 aaKnown RBP8.1□□□□□ -1.11
KDM3B-205ENST00000508386 PLEKHG2Q9H7P9 1386 aa8.1□□□□□ -1.11
KDM3B-205ENST00000508386 KDM2BQ8NHM5 1336 aa8.09□□□□□ -1.11
KDM3B-205ENST00000508386 RPS6KA4O75676 772 aa8.09□□□□□ -1.11
KDM3B-205ENST00000508386 DALRD3Q5D0E6 543 aaKnown RBP8.09□□□□□ -1.11
KDM3B-205ENST00000508386 KDM6AO15550 1401 aaPredicted RBP8.09□□□□□ -1.11
KDM3B-205ENST00000508386 FLT4P35916 1363 aa8.09□□□□□ -1.12
KDM3B-205ENST00000508386 TM4SF1P30408 202 aa8.08□□□□□ -1.12
KDM3B-205ENST00000508386 AMER1Q5JTC6 1135 aaPredicted RBP8.08□□□□□ -1.12
KDM3B-205ENST00000508386 DCAF8Q5TAQ9 597 aa8.08□□□□□ -1.12
KDM3B-205ENST00000508386 PARP3Q9Y6F1 533 aa8.08□□□□□ -1.12
KDM3B-205ENST00000508386 TONSLQ96HA7 1378 aa8.08□□□□□ -1.12
KDM3B-205ENST00000508386 CNTNAP4Q9C0A0 1308 aa8.07□□□□□ -1.12
KDM3B-205ENST00000508386 SMG6Q86US8 1419 aaKnown RBP8.07□□□□□ -1.12
KDM3B-205ENST00000508386 GLTPD2A6NH11 291 aa8.07□□□□□ -1.12
KDM3B-205ENST00000508386 POLRMTO00411 1230 aaKnown RBP8.07□□□□□ -1.12
KDM3B-205ENST00000508386 FOXN1O15353 648 aa8.07□□□□□ -1.12
KDM3B-205ENST00000508386 SLC24A1O60721 1099 aa8.07□□□□□ -1.12
KDM3B-205ENST00000508386 RFC4P35249 363 aa8.07□□□□□ -1.12
KDM3B-205ENST00000508386 TSPYL2Q9H2G4 693 aaPredicted RBP8.07□□□□□ -1.12
KDM3B-205ENST00000508386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.07□□□□□ -1.12
KDM3B-205ENST00000508386 CIZ1Q9ULV3 898 aaPredicted RBP8.07□□□□□ -1.12
KDM3B-205ENST00000508386 SPG7Q9UQ90 795 aa8.07□□□□□ -1.12
KDM3B-205ENST00000508386 TNRC6CQ9HCJ0 1690 aaKnown RBP8.06□□□□□ -1.12
KDM3B-205ENST00000508386 POTEIP0CG38 1075 aa8.06□□□□□ -1.12
KDM3B-205ENST00000508386 POTEJP0CG39 1038 aa8.06□□□□□ -1.12
KDM3B-205ENST00000508386 VEGFAP15692 232 aaPredicted RBP8.06□□□□□ -1.12
KDM3B-205ENST00000508386 INTS5Q6P9B9 1019 aaKnown RBP8.06□□□□□ -1.12
KDM3B-205ENST00000508386 IFNL2Q8IZJ0 200 aa8.06□□□□□ -1.12
KDM3B-205ENST00000508386 DCBLD2Q96PD2 775 aa8.06□□□□□ -1.12
KDM3B-205ENST00000508386 KIF24Q5T7B8 1368 aa8.06□□□□□ -1.12
KDM3B-205ENST00000508386 COL5A3P25940 1745 aaPredicted RBP8.06□□□□□ -1.12
KDM3B-205ENST00000508386 WASHC2AQ641Q2 1341 aa8.05□□□□□ -1.12
KDM3B-205ENST00000508386 USP42Q9H9J4 1324 aaKnown RBP8.05□□□□□ -1.12
KDM3B-205ENST00000508386 ADAMTS7Q9UKP4 1686 aa8.05□□□□□ -1.12
KDM3B-205ENST00000508386 NFKBIEO00221 500 aa8.05□□□□□ -1.12
KDM3B-205ENST00000508386 CRKLP46109 303 aaKnown RBP8.05□□□□□ -1.12
KDM3B-205ENST00000508386 MKRN1Q9UHC7 482 aaKnown RBP8.05□□□□□ -1.12
KDM3B-205ENST00000508386 ZNF831Q5JPB2 1677 aa8.05□□□□□ -1.12
KDM3B-205ENST00000508386 ERVV-2B6SEH9 535 aa8.04□□□□□ -1.12
KDM3B-205ENST00000508386 PPM1GO15355 546 aaPredicted RBP8.04□□□□□ -1.12
KDM3B-205ENST00000508386 LMNB1P20700 586 aa8.04□□□□□ -1.12
KDM3B-205ENST00000508386 BCL2L12Q9HB09 334 aa8.04□□□□□ -1.12
KDM3B-205ENST00000508386 POLKQ9UBT6 870 aa8.04□□□□□ -1.12
KDM3B-205ENST00000508386 PTCD1O75127 700 aaKnown RBP8.03□□□□□ -1.12
KDM3B-205ENST00000508386 EIF4A2Q14240 407 aaKnown RBP8.03□□□□□ -1.12
KDM3B-205ENST00000508386 NFIXQ14938 502 aa8.03□□□□□ -1.12
KDM3B-205ENST00000508386 USPL1Q5W0Q7 1092 aa8.03□□□□□ -1.12
KDM3B-205ENST00000508386 RTN4Q9NQC3 1192 aaKnown RBP8.03□□□□□ -1.12
KDM3B-205ENST00000508386 ZC3H4Q9UPT8 1303 aaKnown RBP8.03□□□□□ -1.12
KDM3B-205ENST00000508386 CCDC88AQ3V6T2 1871 aa8.02□□□□□ -1.12
KDM3B-205ENST00000508386 CARMIL3Q8ND23 1372 aa8.02□□□□□ -1.13
KDM3B-205ENST00000508386 PRDM10Q9NQV6 1147 aa8.02□□□□□ -1.13
KDM3B-205ENST00000508386 VEGFBP49765 207 aa8.01□□□□□ -1.13
KDM3B-205ENST00000508386 FAM161AQ3B820 660 aa8.01□□□□□ -1.13
KDM3B-205ENST00000508386 DNAJC10Q8IXB1 793 aa8.01□□□□□ -1.13
KDM3B-205ENST00000508386 NFATC2IPQ8NCF5 419 aa8.01□□□□□ -1.13
KDM3B-205ENST00000508386 WBP1LQ9NX94 342 aa8.01□□□□□ -1.13
KDM3B-205ENST00000508386 AFDNP55196 1824 aaKnown RBP8.01□□□□□ -1.13
KDM3B-205ENST00000508386 PASKQ96RG2 1323 aa8.01□□□□□ -1.13
KDM3B-205ENST00000508386 TNRC18O15417 2968 aaPredicted RBP8.01□□□□□ -1.13
KDM3B-205ENST00000508386 TJP1Q07157 1748 aa8□□□□□ -1.13
KDM3B-205ENST00000508386 ANKRD26Q9UPS8 1709 aa8□□□□□ -1.13
KDM3B-205ENST00000508386 CNTNAP1P78357 1384 aa8□□□□□ -1.13
KDM3B-205ENST00000508386 DDNO94850 711 aaPredicted RBP8□□□□□ -1.13
KDM3B-205ENST00000508386 ITGBL1O95965 494 aaPredicted RBP8□□□□□ -1.13
KDM3B-205ENST00000508386 LBX1P52954 281 aa8□□□□□ -1.13
KDM3B-205ENST00000508386 CABP4P57796 275 aa8□□□□□ -1.13
KDM3B-205ENST00000508386 AEBP1Q8IUX7 1158 aa8□□□□□ -1.13
KDM3B-205ENST00000508386 TTLL6Q8N841 843 aa8□□□□□ -1.13
KDM3B-205ENST00000508386 PHF12Q96QT6 1004 aa8□□□□□ -1.13
KDM3B-205ENST00000508386 KIF20BQ96Q89 1820 aa8□□□□□ -1.13
KDM3B-205ENST00000508386 SOS1Q07889 1333 aaPredicted RBP8□□□□□ -1.13
KDM3B-205ENST00000508386 SERPINB2P05120 415 aa7.99□□□□□ -1.13
KDM3B-205ENST00000508386 CYP19A1P11511 503 aaPredicted RBP7.99□□□□□ -1.13
KDM3B-205ENST00000508386 C2CD5Q86YS7 1000 aa7.99□□□□□ -1.13
KDM3B-205ENST00000508386 CCDC24Q8N4L8 307 aa7.99□□□□□ -1.13
KDM3B-205ENST00000508386 ABHD8Q96I13 439 aa7.99□□□□□ -1.13
KDM3B-205ENST00000508386 NRXN2Q9P2S2 1712 aa7.99□□□□□ -1.13
KDM3B-205ENST00000508386 TIAM2Q8IVF5 1701 aa7.98□□□□□ -1.13
KDM3B-205ENST00000508386 DLEC1Q9Y238 1755 aa7.98□□□□□ -1.13
KDM3B-205ENST00000508386 GALR2O43603 387 aaPredicted RBP7.98□□□□□ -1.13
KDM3B-205ENST00000508386 C21orf2O43822 256 aa7.98□□□□□ -1.13
KDM3B-205ENST00000508386 ECM2O94769 699 aaPredicted RBP7.98□□□□□ -1.13
KDM3B-205ENST00000508386 HSPA8P11142 646 aaKnown RBP7.98□□□□□ -1.13
KDM3B-205ENST00000508386 CHRM1P11229 460 aaPredicted RBP7.98□□□□□ -1.13
KDM3B-205ENST00000508386 CTCFP49711 727 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms