RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 CCDC88AQ3V6T2 1871 aa21.55■■□□□ 1.04
HDAC6-236ENST00000498808 SOS1Q07889 1333 aaPredicted RBP21.54■■□□□ 1.04
HDAC6-236ENST00000498808 SCN11AQ9UI33 1791 aa21.53■■□□□ 1.04
HDAC6-236ENST00000498808 ZPR1O75312 459 aa21.53■■□□□ 1.04
HDAC6-236ENST00000498808 NFIXQ14938 502 aa21.53■■□□□ 1.04
HDAC6-236ENST00000498808 C1orf141Q5JVX7 400 aa21.53■■□□□ 1.04
HDAC6-236ENST00000498808 DNAJC10Q8IXB1 793 aa21.53■■□□□ 1.04
HDAC6-236ENST00000498808 POTECB2RU33 542 aa21.51■■□□□ 1.03
HDAC6-236ENST00000498808 NFKBIEO00221 500 aa21.51■■□□□ 1.03
HDAC6-236ENST00000498808 TTLL6Q8N841 843 aa21.5■■□□□ 1.03
HDAC6-236ENST00000498808 CARMIL3Q8ND23 1372 aa21.49■■□□□ 1.03
HDAC6-236ENST00000498808 BCL2L12Q9HB09 334 aa21.49■■□□□ 1.03
HDAC6-236ENST00000498808 NARFQ9UHQ1 456 aa21.49■■□□□ 1.03
HDAC6-236ENST00000498808 COL15A1P39059 1388 aa21.48■■□□□ 1.03
HDAC6-236ENST00000498808 SERPINB2P05120 415 aa21.48■■□□□ 1.03
HDAC6-236ENST00000498808 CYP19A1P11511 503 aaPredicted RBP21.48■■□□□ 1.03
HDAC6-236ENST00000498808 ZBTB1Q9Y2K1 713 aa21.47■■□□□ 1.03
HDAC6-236ENST00000498808 SULT6B1Q6IMI4 303 aa21.46■■□□□ 1.03
HDAC6-236ENST00000498808 C2CD5Q86YS7 1000 aa21.46■■□□□ 1.03
HDAC6-236ENST00000498808 POLR3GLQ9BT43 218 aa21.46■■□□□ 1.03
HDAC6-236ENST00000498808 SLC52A2Q9HAB3 445 aa21.45■■□□□ 1.02
HDAC6-236ENST00000498808 MRC1P22897 1456 aa21.45■■□□□ 1.02
HDAC6-236ENST00000498808 DICER1Q9UPY3 1922 aaKnown RBP21.44■■□□□ 1.02
HDAC6-236ENST00000498808 ANKRD31Q8N7Z5 1873 aa21.43■■□□□ 1.02
HDAC6-236ENST00000498808 H0YIN7 160 aa21.43■■□□□ 1.02
HDAC6-236ENST00000498808 SLC39A6Q13433 755 aa21.43■■□□□ 1.02
HDAC6-236ENST00000498808 LGR6Q9HBX8 967 aa21.43■■□□□ 1.02
HDAC6-236ENST00000498808 FER1L6Q2WGJ9 1857 aa21.42■■□□□ 1.02
HDAC6-236ENST00000498808 AKAP4Q5JQC9 854 aa21.42■■□□□ 1.02
HDAC6-236ENST00000498808 VIRMAQ69YN4 1812 aaKnown RBP21.42■■□□□ 1.02
HDAC6-236ENST00000498808 DPY19L2Q6NUT2 758 aa21.42■■□□□ 1.02
HDAC6-236ENST00000498808 CREBZFQ9NS37 354 aa21.42■■□□□ 1.02
HDAC6-236ENST00000498808 MKRN1Q9UHC7 482 aaKnown RBP21.42■■□□□ 1.02
HDAC6-236ENST00000498808 COL11A2P13942 1736 aaPredicted RBP21.41■■□□□ 1.02
HDAC6-236ENST00000498808 POTEIP0CG38 1075 aa21.4■■□□□ 1.02
HDAC6-236ENST00000498808 POTEJP0CG39 1038 aa21.4■■□□□ 1.02
HDAC6-236ENST00000498808 IL13P35225 146 aa21.4■■□□□ 1.02
HDAC6-236ENST00000498808 ERFEQ4G0M1 354 aa21.39■■□□□ 1.01
HDAC6-236ENST00000498808 CHADLQ6NUI6 762 aa21.39■■□□□ 1.01
HDAC6-236ENST00000498808 BICDL1Q6ZP65 573 aa21.39■■□□□ 1.01
HDAC6-236ENST00000498808 PANK3Q9H999 370 aa21.39■■□□□ 1.01
HDAC6-236ENST00000498808 FOXN1O15353 648 aa21.38■■□□□ 1.01
HDAC6-236ENST00000498808 RNMTO43148 476 aaKnown RBP21.38■■□□□ 1.01
HDAC6-236ENST00000498808 C21orf2O43822 256 aa21.38■■□□□ 1.01
HDAC6-236ENST00000498808 ZNF219Q9P2Y4 722 aaPredicted RBP21.38■■□□□ 1.01
HDAC6-236ENST00000498808 UBR2Q8IWV8 1755 aa21.38■■□□□ 1.01
HDAC6-236ENST00000498808 CANXP27824 592 aaKnown RBP21.37■■□□□ 1.01
HDAC6-236ENST00000498808 MORC1Q86VD1 984 aa21.37■■□□□ 1.01
HDAC6-236ENST00000498808 ZNF622Q969S3 477 aaKnown RBP eCLIP21.37■■□□□ 1.01
HDAC6-236ENST00000498808 VSIG10Q8N0Z9 540 aa21.36■■□□□ 1.01
HDAC6-236ENST00000498808 CNTNAP1P78357 1384 aa21.36■■□□□ 1.01
HDAC6-236ENST00000498808 SCN7AQ01118 1682 aa21.35■■□□□ 1.01
HDAC6-236ENST00000498808 DDNO94850 711 aaPredicted RBP21.35■■□□□ 1.01
HDAC6-236ENST00000498808 EIF5P55010 431 aaKnown RBP21.35■■□□□ 1.01
HDAC6-236ENST00000498808 TBC1D9BQ66K14 1250 aa21.35■■□□□ 1.01
HDAC6-236ENST00000498808 CCDC24Q8N4L8 307 aa21.35■■□□□ 1.01
HDAC6-236ENST00000498808 LTBP3Q9NS15 1303 aa21.34■■□□□ 1.01
HDAC6-236ENST00000498808 BRIP1Q9BX63 1249 aa21.34■■□□□ 1.01
HDAC6-236ENST00000498808 PDE6BP35913 854 aa21.33■■□□□ 1.01
HDAC6-236ENST00000498808 PRR5LQ6MZQ0 368 aa21.33■■□□□ 1.01
HDAC6-236ENST00000498808 TAOK3Q9H2K8 898 aa21.33■■□□□ 1.01
HDAC6-236ENST00000498808 PRDM10Q9NQV6 1147 aa21.33■■□□□ 1.01
HDAC6-236ENST00000498808 SLX4Q8IY92 1834 aa21.33■■□□□ 1.01
HDAC6-236ENST00000498808 PASKQ96RG2 1323 aa21.32■■□□□ 1
HDAC6-236ENST00000498808 PDZRN3Q9UPQ7 1066 aa21.32■■□□□ 1
HDAC6-236ENST00000498808 CACNA1SQ13698 1873 aa21.32■■□□□ 1
HDAC6-236ENST00000498808 A0A087WZG4 1122 aa21.3■■□□□ 1
HDAC6-236ENST00000498808 MTHFSDQ2M296 383 aaKnown RBP21.3■■□□□ 1
HDAC6-236ENST00000498808 ARFGEF2Q9Y6D5 1785 aa21.29■■□□□ 1
HDAC6-236ENST00000498808 STARD3NLO95772 234 aa21.29■■□□□ 1
HDAC6-236ENST00000498808 HMOX1P09601 288 aa21.29■■□□□ 1
HDAC6-236ENST00000498808 SCN4AP35499 1836 aa21.28■■□□□ 1
HDAC6-236ENST00000498808 LDHDQ86WU2 507 aa21.28■■□□□ 1
HDAC6-236ENST00000498808 TBC1D2BQ9UPU7 963 aa21.28■■□□□ 1
HDAC6-236ENST00000498808 CTCFP49711 727 aaPredicted RBP21.27■■□□□ 1
HDAC6-236ENST00000498808 VEGFBP49765 207 aa21.27■■□□□ 1
HDAC6-236ENST00000498808 PRPF40BQ6NWY9 871 aaKnown RBP21.27■■□□□ 1
HDAC6-236ENST00000498808 L3MBTL3Q96JM7 780 aaPredicted RBP21.27■■□□□ 1
HDAC6-236ENST00000498808 TAF1DQ9H5J8 278 aaPredicted RBP21.27■■□□□ 1
HDAC6-236ENST00000498808 IQCA1LA6NCM1 817 aa21.26■□□□□ 0.99
HDAC6-236ENST00000498808 STYK1Q6J9G0 422 aa21.26■□□□□ 0.99
HDAC6-236ENST00000498808 CNKSR1Q969H4 720 aa21.26■□□□□ 0.99
HDAC6-236ENST00000498808 ZNF496Q96IT1 587 aaPredicted RBP21.26■□□□□ 0.99
HDAC6-236ENST00000498808 ITGBL1O95965 494 aaPredicted RBP21.25■□□□□ 0.99
HDAC6-236ENST00000498808 SRGNP10124 158 aa21.25■□□□□ 0.99
HDAC6-236ENST00000498808 TTC5Q8N0Z6 440 aa21.25■□□□□ 0.99
HDAC6-236ENST00000498808 CNBD1Q8NA66 436 aa21.25■□□□□ 0.99
HDAC6-236ENST00000498808 AIDAQ96BJ3 306 aa21.25■□□□□ 0.99
HDAC6-236ENST00000498808 TIMELESSQ9UNS1 1208 aa21.25■□□□□ 0.99
HDAC6-236ENST00000498808 ZNF330Q9Y3S2 320 aaPredicted RBP21.25■□□□□ 0.99
HDAC6-236ENST00000498808 HEG1Q9ULI3 1381 aa21.24■□□□□ 0.99
HDAC6-236ENST00000498808 TMEM88BA6NKF7 163 aa21.24■□□□□ 0.99
HDAC6-236ENST00000498808 SLC34A2O95436 690 aa21.24■□□□□ 0.99
HDAC6-236ENST00000498808 WBP1LQ9NX94 342 aa21.24■□□□□ 0.99
HDAC6-236ENST00000498808 ADAMTSL1Q8N6G6 1762 aa21.23■□□□□ 0.99
HDAC6-236ENST00000498808 CAMTA2O94983 1202 aa21.23■□□□□ 0.99
HDAC6-236ENST00000498808 HSPA5P11021 654 aaKnown RBP21.23■□□□□ 0.99
HDAC6-236ENST00000498808 IL6STP40189 918 aaPredicted RBP21.23■□□□□ 0.99
HDAC6-236ENST00000498808 LBX1P52954 281 aa21.23■□□□□ 0.99
HDAC6-236ENST00000498808 SOGA3Q5TF21 947 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms