RNA–Protein interactions for RNA: ENST00000497567.1

ATP13A3-210, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 532 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-210ENST00000497567 NXF1Q9UBU9 619 aaKnown RBP11.48□□□□□ -0.57
ATP13A3-210ENST00000497567 PPP1R12BO60237 982 aaPredicted RBP11.47□□□□□ -0.57
ATP13A3-210ENST00000497567 PRMT3O60678 531 aa11.47□□□□□ -0.57
ATP13A3-210ENST00000497567 CSB-PGBD3P0DP91 1061 aa11.47□□□□□ -0.57
ATP13A3-210ENST00000497567 NOS2P35228 1153 aa11.47□□□□□ -0.57
ATP13A3-210ENST00000497567 TEAD4Q15561 434 aa11.47□□□□□ -0.57
ATP13A3-210ENST00000497567 CHMP7Q8WUX9 453 aaPredicted RBP11.47□□□□□ -0.57
ATP13A3-210ENST00000497567 L3MBTL2Q969R5 705 aa11.47□□□□□ -0.57
ATP13A3-210ENST00000497567 GAS2L1Q99501 681 aaPredicted RBP11.47□□□□□ -0.57
ATP13A3-210ENST00000497567 CUEDC1Q9NWM3 386 aaPredicted RBP11.47□□□□□ -0.57
ATP13A3-210ENST00000497567 DYRK1BQ9Y463 629 aa11.47□□□□□ -0.57
ATP13A3-210ENST00000497567 WEE1P30291 646 aa11.46□□□□□ -0.57
ATP13A3-210ENST00000497567 RETREG2Q8NC44 543 aa11.46□□□□□ -0.57
ATP13A3-210ENST00000497567 EML1O00423 815 aa11.45□□□□□ -0.58
ATP13A3-210ENST00000497567 MSX1P28360 303 aa11.45□□□□□ -0.58
ATP13A3-210ENST00000497567 TXLNAP40222 546 aa11.45□□□□□ -0.58
ATP13A3-210ENST00000497567 PSMA6P60900 246 aaKnown RBP11.45□□□□□ -0.58
ATP13A3-210ENST00000497567 OCLNQ16625 522 aa11.45□□□□□ -0.58
ATP13A3-210ENST00000497567 AIDAQ96BJ3 306 aa11.45□□□□□ -0.58
ATP13A3-210ENST00000497567 GPAMQ9HCL2 828 aa11.45□□□□□ -0.58
ATP13A3-210ENST00000497567 ZNF232Q9UNY5 417 aa11.45□□□□□ -0.58
ATP13A3-210ENST00000497567 A0A1B0GTH6 734 aa11.44□□□□□ -0.58
ATP13A3-210ENST00000497567 SERTM1A2A2V5 107 aa11.44□□□□□ -0.58
ATP13A3-210ENST00000497567 IGFBP4P22692 258 aa11.44□□□□□ -0.58
ATP13A3-210ENST00000497567 CLP1Q92989 425 aaKnown RBP11.44□□□□□ -0.58
ATP13A3-210ENST00000497567 ZNF775Q96BV0 537 aaPredicted RBP11.44□□□□□ -0.58
ATP13A3-210ENST00000497567 TERTO14746 1132 aaKnown RBP11.43□□□□□ -0.58
ATP13A3-210ENST00000497567 ATP4AP20648 1035 aa11.43□□□□□ -0.58
ATP13A3-210ENST00000497567 ITGA6P23229 1130 aa11.43□□□□□ -0.58
ATP13A3-210ENST00000497567 C2orf49Q9BVC5 232 aaPredicted RBP11.43□□□□□ -0.58
ATP13A3-210ENST00000497567 F11P03951 625 aa11.42□□□□□ -0.58
ATP13A3-210ENST00000497567 POTEAQ6S8J7 498 aa11.42□□□□□ -0.58
ATP13A3-210ENST00000497567 RIPOR1Q6ZS17 1223 aa11.42□□□□□ -0.58
ATP13A3-210ENST00000497567 HCN4Q9Y3Q4 1203 aa11.42□□□□□ -0.58
ATP13A3-210ENST00000497567 H3BM21 787 aa11.41□□□□□ -0.58
ATP13A3-210ENST00000497567 STAG2Q8N3U4 1231 aa11.41□□□□□ -0.58
ATP13A3-210ENST00000497567 RUBCNLQ9H714 662 aa11.41□□□□□ -0.58
ATP13A3-210ENST00000497567 THBS1P07996 1170 aa11.4□□□□□ -0.58
ATP13A3-210ENST00000497567 FKBP5Q13451 457 aaPredicted RBP11.4□□□□□ -0.58
ATP13A3-210ENST00000497567 KLRG1Q96E93 195 aa11.4□□□□□ -0.58
ATP13A3-210ENST00000497567 CXXC1Q9P0U4 656 aaPredicted RBP11.4□□□□□ -0.58
ATP13A3-210ENST00000497567 HIRAP54198 1017 aaPredicted RBP11.39□□□□□ -0.59
ATP13A3-210ENST00000497567 NFX1Q12986 1120 aaKnown RBP11.39□□□□□ -0.59
ATP13A3-210ENST00000497567 DBN1Q16643 649 aa11.39□□□□□ -0.59
ATP13A3-210ENST00000497567 NBPF1Q3BBV0 1214 aa11.39□□□□□ -0.59
ATP13A3-210ENST00000497567 LCE2CQ5TA81 110 aa11.39□□□□□ -0.59
ATP13A3-210ENST00000497567 ATP2B4P23634 1241 aa11.38□□□□□ -0.59
ATP13A3-210ENST00000497567 NPAS3Q8IXF0 933 aa11.38□□□□□ -0.59
ATP13A3-210ENST00000497567 VWA5B2Q8N398 1253 aa11.38□□□□□ -0.59
ATP13A3-210ENST00000497567 C7orf43Q8WVR3 580 aa11.38□□□□□ -0.59
ATP13A3-210ENST00000497567 PHACTR1Q9C0D0 580 aa11.38□□□□□ -0.59
ATP13A3-210ENST00000497567 ZDHHC3Q9NYG2 299 aa11.38□□□□□ -0.59
ATP13A3-210ENST00000497567 USTQ9Y2C2 406 aa11.38□□□□□ -0.59
ATP13A3-210ENST00000497567 CHMP3Q9Y3E7 222 aa11.38□□□□□ -0.59
ATP13A3-210ENST00000497567 ERBB4Q15303 1308 aa11.37□□□□□ -0.59
ATP13A3-210ENST00000497567 FOXO3O43524 673 aa11.37□□□□□ -0.59
ATP13A3-210ENST00000497567 CAPN12Q6ZSI9 719 aa11.37□□□□□ -0.59
ATP13A3-210ENST00000497567 NGLY1Q96IV0 654 aa11.37□□□□□ -0.59
ATP13A3-210ENST00000497567 CDC14CA4D256 554 aa11.36□□□□□ -0.59
ATP13A3-210ENST00000497567 SCNN1AP37088 669 aa11.36□□□□□ -0.59
ATP13A3-210ENST00000497567 TRIM22Q8IYM9 498 aa11.36□□□□□ -0.59
ATP13A3-210ENST00000497567 ALDH16A1Q8IZ83 802 aa11.36□□□□□ -0.59
ATP13A3-210ENST00000497567 C1orf216Q8TAB5 229 aa11.36□□□□□ -0.59
ATP13A3-210ENST00000497567 ZNF837Q96EG3 531 aaPredicted RBP11.36□□□□□ -0.59
ATP13A3-210ENST00000497567 ZIC5Q96T25 663 aa11.36□□□□□ -0.59
ATP13A3-210ENST00000497567 TATP17735 454 aaPredicted RBP11.35□□□□□ -0.59
ATP13A3-210ENST00000497567 GPR161Q8N6U8 529 aaKnown RBP11.35□□□□□ -0.59
ATP13A3-210ENST00000497567 MKNK1Q9BUB5 465 aa11.35□□□□□ -0.59
ATP13A3-210ENST00000497567 CRISPLD1Q9H336 500 aa11.35□□□□□ -0.59
ATP13A3-210ENST00000497567 A0A1W2PNR3 127 aa11.34□□□□□ -0.59
ATP13A3-210ENST00000497567 ARSJQ5FYB0 599 aaPredicted RBP11.34□□□□□ -0.59
ATP13A3-210ENST00000497567 NANOS1Q8WY41 292 aaKnown RBP11.34□□□□□ -0.59
ATP13A3-210ENST00000497567 NUCKS1Q9H1E3 243 aaKnown RBP11.34□□□□□ -0.59
ATP13A3-210ENST00000497567 SSFA2P28290 1259 aa11.33□□□□□ -0.6
ATP13A3-210ENST00000497567 C1orf53Q5VUE5 145 aa11.33□□□□□ -0.6
ATP13A3-210ENST00000497567 PHLDB3Q6NSJ2 640 aa11.33□□□□□ -0.6
ATP13A3-210ENST00000497567 BICDL1Q6ZP65 573 aa11.33□□□□□ -0.6
ATP13A3-210ENST00000497567 PGBD3Q8N328 593 aa11.33□□□□□ -0.6
ATP13A3-210ENST00000497567 SLC16A10Q8TF71 515 aa11.33□□□□□ -0.6
ATP13A3-210ENST00000497567 H7C1W4 665 aa11.32□□□□□ -0.6
ATP13A3-210ENST00000497567 UBAP2LQ14157 1087 aaKnown RBP11.32□□□□□ -0.6
ATP13A3-210ENST00000497567 SV2AQ7L0J3 742 aa11.32□□□□□ -0.6
ATP13A3-210ENST00000497567 RHPN1Q8TCX5 695 aa11.32□□□□□ -0.6
ATP13A3-210ENST00000497567 GTPBP3Q969Y2 492 aaKnown RBP11.32□□□□□ -0.6
ATP13A3-210ENST00000497567 VTI1AQ96AJ9 217 aa11.32□□□□□ -0.6
ATP13A3-210ENST00000497567 QTRT2Q9H974 415 aaKnown RBP11.32□□□□□ -0.6
ATP13A3-210ENST00000497567 WFS1O76024 890 aa11.31□□□□□ -0.6
ATP13A3-210ENST00000497567 VSIG8P0DPA2 414 aa11.31□□□□□ -0.6
ATP13A3-210ENST00000497567 TREML4Q6UXN2 200 aa11.31□□□□□ -0.6
ATP13A3-210ENST00000497567 GPR25O00155 361 aa11.3□□□□□ -0.6
ATP13A3-210ENST00000497567 EFHC2Q5JST6 749 aa11.3□□□□□ -0.6
ATP13A3-210ENST00000497567 LCE2AQ5TA79 106 aaPredicted RBP11.3□□□□□ -0.6
ATP13A3-210ENST00000497567 HSH2DQ96JZ2 352 aa11.3□□□□□ -0.6
ATP13A3-210ENST00000497567 NAA30Q147X3 362 aaPredicted RBP11.29□□□□□ -0.6
ATP13A3-210ENST00000497567 LRRC69Q6ZNQ3 347 aa11.29□□□□□ -0.6
ATP13A3-210ENST00000497567 ZNF280CQ8ND82 737 aa11.29□□□□□ -0.6
ATP13A3-210ENST00000497567 GMCL1Q96IK5 515 aa11.29□□□□□ -0.6
ATP13A3-210ENST00000497567 SAP130Q9H0E3 1048 aa11.29□□□□□ -0.6
ATP13A3-210ENST00000497567 SEPT3Q9UH03 358 aa11.29□□□□□ -0.6
ATP13A3-210ENST00000497567 RTN1Q16799 776 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms