RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 CNTNAP4Q9C0A0 1308 aa9.64□□□□□ -0.87
FN1-225ENST00000494446 L3MBTL2Q969R5 705 aa9.64□□□□□ -0.87
FN1-225ENST00000494446 INSRP06213 1382 aa9.63□□□□□ -0.87
FN1-225ENST00000494446 KDRP35968 1356 aa9.63□□□□□ -0.87
FN1-225ENST00000494446 KIF20BQ96Q89 1820 aa9.63□□□□□ -0.87
FN1-225ENST00000494446 PASKQ96RG2 1323 aa9.63□□□□□ -0.87
FN1-225ENST00000494446 NFKBIEO00221 500 aa9.63□□□□□ -0.87
FN1-225ENST00000494446 ABCB7O75027 752 aa9.63□□□□□ -0.87
FN1-225ENST00000494446 MAP2K1Q02750 393 aaPredicted RBP9.63□□□□□ -0.87
FN1-225ENST00000494446 DEFB115Q30KQ5 88 aa9.63□□□□□ -0.87
FN1-225ENST00000494446 ERFEQ4G0M1 354 aa9.63□□□□□ -0.87
FN1-225ENST00000494446 TTLL6Q8N841 843 aa9.63□□□□□ -0.87
FN1-225ENST00000494446 USP42Q9H9J4 1324 aaKnown RBP9.62□□□□□ -0.87
FN1-225ENST00000494446 POLRMTO00411 1230 aaKnown RBP9.62□□□□□ -0.87
FN1-225ENST00000494446 DDNO94850 711 aaPredicted RBP9.62□□□□□ -0.87
FN1-225ENST00000494446 ZNF219Q9P2Y4 722 aaPredicted RBP9.62□□□□□ -0.87
FN1-225ENST00000494446 NRXN2Q9P2S2 1712 aa9.62□□□□□ -0.87
FN1-225ENST00000494446 WDR33Q9C0J8 1336 aaKnown RBP9.61□□□□□ -0.87
FN1-225ENST00000494446 PHKG2P15735 406 aa9.61□□□□□ -0.87
FN1-225ENST00000494446 TM4SF1P30408 202 aa9.61□□□□□ -0.87
FN1-225ENST00000494446 LDHDQ86WU2 507 aa9.61□□□□□ -0.87
FN1-225ENST00000494446 C2CD5Q86YS7 1000 aa9.61□□□□□ -0.87
FN1-225ENST00000494446 IFNL2Q8IZJ0 200 aa9.61□□□□□ -0.87
FN1-225ENST00000494446 BEGAINQ9BUH8 593 aa9.61□□□□□ -0.87
FN1-225ENST00000494446 GGNBP2Q9H3C7 697 aa9.61□□□□□ -0.87
FN1-225ENST00000494446 CLEC11AQ9Y240 323 aa9.61□□□□□ -0.87
FN1-225ENST00000494446 TRPM7Q96QT4 1865 aa9.61□□□□□ -0.87
FN1-225ENST00000494446 ADAMTS7Q9UKP4 1686 aa9.61□□□□□ -0.87
FN1-225ENST00000494446 ANKRD31Q8N7Z5 1873 aa9.6□□□□□ -0.87
FN1-225ENST00000494446 TJP1Q07157 1748 aa9.6□□□□□ -0.87
FN1-225ENST00000494446 RASSF10A6NK89 507 aa9.6□□□□□ -0.87
FN1-225ENST00000494446 ITGBL1O95965 494 aaPredicted RBP9.6□□□□□ -0.87
FN1-225ENST00000494446 CRKLP46109 303 aaKnown RBP9.6□□□□□ -0.87
FN1-225ENST00000494446 EAPPQ56P03 285 aaPredicted RBP9.6□□□□□ -0.87
FN1-225ENST00000494446 FLT4P35916 1363 aa9.6□□□□□ -0.87
FN1-225ENST00000494446 H0YIN7 160 aa9.59□□□□□ -0.87
FN1-225ENST00000494446 PTCD1O75127 700 aaKnown RBP9.59□□□□□ -0.87
FN1-225ENST00000494446 ZPR1O75312 459 aa9.59□□□□□ -0.87
FN1-225ENST00000494446 GRM1Q13255 1194 aa9.59□□□□□ -0.87
FN1-225ENST00000494446 TSKSQ9UJT2 592 aa9.59□□□□□ -0.87
FN1-225ENST00000494446 ABT1Q9ULW3 272 aaKnown RBP9.59□□□□□ -0.87
FN1-225ENST00000494446 THSD7BQ9C0I4 1608 aa9.58□□□□□ -0.88
FN1-225ENST00000494446 IQCA1LA6NCM1 817 aa9.58□□□□□ -0.88
FN1-225ENST00000494446 FYB1O15117 783 aa9.58□□□□□ -0.88
FN1-225ENST00000494446 C21orf2O43822 256 aa9.58□□□□□ -0.88
FN1-225ENST00000494446 USPL1Q5W0Q7 1092 aa9.58□□□□□ -0.88
FN1-225ENST00000494446 PAXIP1Q6ZW49 1069 aaPredicted RBP9.58□□□□□ -0.88
FN1-225ENST00000494446 ZNF622Q969S3 477 aaKnown RBP eCLIP9.58□□□□□ -0.88
FN1-225ENST00000494446 MCOLN1Q9GZU1 580 aa9.58□□□□□ -0.88
FN1-225ENST00000494446 TAF1DQ9H5J8 278 aaPredicted RBP9.58□□□□□ -0.88
FN1-225ENST00000494446 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.58□□□□□ -0.881e-323■□□□□ 9.6
FN1-225ENST00000494446 COL11A2P13942 1736 aaPredicted RBP9.58□□□□□ -0.88
FN1-225ENST00000494446 SLX4Q8IY92 1834 aa9.58□□□□□ -0.88
FN1-225ENST00000494446 ERVV-2B6SEH9 535 aa9.57□□□□□ -0.88
FN1-225ENST00000494446 PPM1GO15355 546 aaPredicted RBP9.57□□□□□ -0.88
FN1-225ENST00000494446 SERPINB2P05120 415 aa9.57□□□□□ -0.88
FN1-225ENST00000494446 ADAMTSL1Q8N6G6 1762 aa9.57□□□□□ -0.88
FN1-225ENST00000494446 NCAPD2Q15021 1401 aa9.56□□□□□ -0.88
FN1-225ENST00000494446 ANKRD26Q9UPS8 1709 aa9.56□□□□□ -0.88
FN1-225ENST00000494446 KIF24Q5T7B8 1368 aa9.56□□□□□ -0.88
FN1-225ENST00000494446 NFIXQ14938 502 aa9.56□□□□□ -0.88
FN1-225ENST00000494446 PUS7Q96PZ0 661 aaKnown RBP9.56□□□□□ -0.88
FN1-225ENST00000494446 EYA1Q99502 592 aa9.56□□□□□ -0.88
FN1-225ENST00000494446 CARD11Q9BXL7 1154 aa9.56□□□□□ -0.88
FN1-225ENST00000494446 EMILIN1Q9Y6C2 1016 aa9.56□□□□□ -0.88
FN1-225ENST00000494446 LTBP1Q14766 1721 aa9.56□□□□□ -0.88
FN1-225ENST00000494446 ARFGEF2Q9Y6D5 1785 aa9.55□□□□□ -0.88
FN1-225ENST00000494446 CARMIL3Q8ND23 1372 aa9.55□□□□□ -0.88
FN1-225ENST00000494446 TONSLQ96HA7 1378 aa9.55□□□□□ -0.88
FN1-225ENST00000494446 CABP4P57796 275 aa9.55□□□□□ -0.88
FN1-225ENST00000494446 DGKZQ13574 1117 aa9.55□□□□□ -0.88
FN1-225ENST00000494446 MAP1SQ66K74 1059 aaPredicted RBP9.55□□□□□ -0.88
FN1-225ENST00000494446 INTS5Q6P9B9 1019 aaKnown RBP9.55□□□□□ -0.88
FN1-225ENST00000494446 CNTROBQ8N137 903 aa9.55□□□□□ -0.88
FN1-225ENST00000494446 CAPNS2Q96L46 248 aa9.55□□□□□ -0.88
FN1-225ENST00000494446 GPR101Q96P66 508 aaPredicted RBP9.55□□□□□ -0.88
FN1-225ENST00000494446 TAOK3Q9H2K8 898 aa9.55□□□□□ -0.88
FN1-225ENST00000494446 ECE1P42892 770 aa9.54□□□□□ -0.88
FN1-225ENST00000494446 CYP4F22Q6NT55 531 aa9.54□□□□□ -0.88
FN1-225ENST00000494446 L3MBTL3Q96JM7 780 aaPredicted RBP9.54□□□□□ -0.88
FN1-225ENST00000494446 HACL1Q9UJ83 578 aa9.54□□□□□ -0.88
FN1-225ENST00000494446 LTBP3Q9NS15 1303 aa9.54□□□□□ -0.88
FN1-225ENST00000494446 EPHX2P34913 555 aa9.53□□□□□ -0.88
FN1-225ENST00000494446 SOX10P56693 466 aa9.53□□□□□ -0.88
FN1-225ENST00000494446 NEUROD1Q13562 356 aa9.53□□□□□ -0.88
FN1-225ENST00000494446 PRPF38BQ5VTL8 546 aaKnown RBP9.53□□□□□ -0.88
FN1-225ENST00000494446 BICDL1Q6ZP65 573 aa9.53□□□□□ -0.88
FN1-225ENST00000494446 SIN3AQ96ST3 1273 aa9.53□□□□□ -0.88
FN1-225ENST00000494446 SCN11AQ9UI33 1791 aa9.52□□□□□ -0.88
FN1-225ENST00000494446 AOC2O75106 756 aa9.52□□□□□ -0.89
FN1-225ENST00000494446 HSP90AB1P08238 724 aaKnown RBP9.52□□□□□ -0.89
FN1-225ENST00000494446 DDX21Q9NR30 783 aaKnown RBP eCLIP9.52□□□□□ -0.89
FN1-225ENST00000494446 NARFQ9UHQ1 456 aa9.52□□□□□ -0.89
FN1-225ENST00000494446 SOS1Q07889 1333 aaPredicted RBP9.52□□□□□ -0.89
FN1-225ENST00000494446 PDE6BP35913 854 aa9.51□□□□□ -0.89
FN1-225ENST00000494446 FMR1Q06787 632 aaKnown RBP eCLIP9.51□□□□□ -0.89
FN1-225ENST00000494446 PNMA8AQ86V59 439 aaPredicted RBP9.51□□□□□ -0.89
FN1-225ENST00000494446 DNAJC10Q8IXB1 793 aa9.51□□□□□ -0.89
FN1-225ENST00000494446 CCDC24Q8N4L8 307 aa9.51□□□□□ -0.89
FN1-225ENST00000494446 NFATC2IPQ8NCF5 419 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms