RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 CABP4P57796 275 aa9.06□□□□□ -0.96
BRCA1-221ENST00000493795 AMPD3Q01432 767 aa9.06□□□□□ -0.96
BRCA1-221ENST00000493795 JADE2Q9NQC1 790 aa9.06□□□□□ -0.96
BRCA1-221ENST00000493795 CEP126Q9P2H0 1117 aa9.06□□□□□ -0.96
BRCA1-221ENST00000493795 ZFYP08048 801 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-221ENST00000493795 SNW1Q13573 536 aaKnown RBP9.05□□□□□ -0.96
BRCA1-221ENST00000493795 NUTM2GQ5VZR2 741 aa9.05□□□□□ -0.96
BRCA1-221ENST00000493795 TRMT1Q9NXH9 659 aaKnown RBP9.05□□□□□ -0.96
BRCA1-221ENST00000493795 FEZ2Q9UHY8 353 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-221ENST00000493795 SETSIPP0DME0 302 aa9.05□□□□□ -0.96
BRCA1-221ENST00000493795 GOLIM4O00461 696 aa9.05□□□□□ -0.96
BRCA1-221ENST00000493795 IGHMBP2P38935 993 aaKnown RBP9.05□□□□□ -0.96
BRCA1-221ENST00000493795 CHD1LQ86WJ1 897 aa9.05□□□□□ -0.96
BRCA1-221ENST00000493795 DZIP1Q86YF9 867 aaKnown RBP9.05□□□□□ -0.96
BRCA1-221ENST00000493795 CNNM3Q8NE01 707 aa9.05□□□□□ -0.96
BRCA1-221ENST00000493795 MIPOL1Q8TD10 442 aa9.05□□□□□ -0.96
BRCA1-221ENST00000493795 U3KPZ7 1027 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-221ENST00000493795 LIG1P18858 919 aa9.05□□□□□ -0.96
BRCA1-221ENST00000493795 CRACR2BQ8N4Y2 399 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-221ENST00000493795 OTUD6BQ8N6M0 293 aa9.05□□□□□ -0.96
BRCA1-221ENST00000493795 TTC16Q8NEE8 873 aa9.05□□□□□ -0.96
BRCA1-221ENST00000493795 TTC12Q9H892 705 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-221ENST00000493795 PUF60Q9UHX1 559 aaKnown RBP9.05□□□□□ -0.96
BRCA1-221ENST00000493795 BRD4O60885 1362 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-221ENST00000493795 PLEKHH1Q9ULM0 1364 aa9.05□□□□□ -0.96
BRCA1-221ENST00000493795 OPA1O60313 960 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 POLR3DP05423 398 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-221ENST00000493795 MAP3K9P80192 1104 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 CCDC121Q6ZUS5 278 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 CEP120Q8N960 986 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 RGS22Q8NE09 1264 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 C16orf45Q96MC5 204 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-221ENST00000493795 PYM1Q9BRP8 204 aaKnown RBP9.04□□□□□ -0.96
BRCA1-221ENST00000493795 KIF5BP33176 963 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 TMC6Q7Z403 805 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 CCDC110Q8TBZ0 833 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 IDH1O75874 414 aaKnown RBP9.04□□□□□ -0.96
BRCA1-221ENST00000493795 ZBTB16Q05516 673 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 TCERG1LQ5VWI1 586 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 SPTY2D1Q68D10 685 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-221ENST00000493795 TCP11L2Q8N4U5 519 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 CCDC63Q8NA47 563 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 CTCFLQ8NI51 663 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-221ENST00000493795 CALML4Q96GE6 196 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 A0A087WZG4 1122 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 C8orf76Q96K31 380 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 MKNK2Q9HBH9 465 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 CWC25Q9NXE8 425 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-221ENST00000493795 RSPH14Q9UHP6 348 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 ODF2LQ9ULJ1 636 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 PAXBP1Q9Y5B6 917 aa9.04□□□□□ -0.96
BRCA1-221ENST00000493795 CCDC194A0A1B0GVG4 234 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 GMNNO75496 209 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 PRKAR2BP31323 418 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 STX1AQ16623 288 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 KIAA1524Q8TCG1 905 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 TBC1D5Q92609 795 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 ZFP91Q96JP5 570 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-221ENST00000493795 STIM2Q9P246 746 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 RB1CC1Q8TDY2 1594 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 XPCQ01831 940 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-221ENST00000493795 ZNF354CQ86Y25 554 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 CCDC12Q8WUD4 166 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-221ENST00000493795 LRRC27Q9C0I9 530 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 ZHX1Q9UKY1 873 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-221ENST00000493795 ATP2A1O14983 1001 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 SH3BP5O60239 455 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 TACC1O75410 805 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 PRPHP41219 470 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 SSRP1Q08945 709 aaKnown RBP9.03□□□□□ -0.96
BRCA1-221ENST00000493795 CCDC129Q6ZRS4 1044 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 SH2B1Q9NRF2 756 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-221ENST00000493795 MCM5P33992 734 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 KRT222Q8N1A0 295 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 SMC1BQ8NDV3 1235 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 RSRC1Q96IZ7 334 aaKnown RBP9.03□□□□□ -0.96
BRCA1-221ENST00000493795 STAC3Q96MF2 364 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 SELENOOQ9BVL4 669 aa9.03□□□□□ -0.96
BRCA1-221ENST00000493795 CPSF2Q9P2I0 782 aaKnown RBP9.03□□□□□ -0.96
BRCA1-221ENST00000493795 SRGAP3O43295 1099 aa9.02□□□□□ -0.96
BRCA1-221ENST00000493795 MYO1BO43795 1136 aa9.02□□□□□ -0.96
BRCA1-221ENST00000493795 SYNCQ9H7C4 482 aa9.02□□□□□ -0.96
BRCA1-221ENST00000493795 DDX19AQ9NUU7 478 aaKnown RBP9.02□□□□□ -0.96
BRCA1-221ENST00000493795 SPG7Q9UQ90 795 aa9.02□□□□□ -0.96
BRCA1-221ENST00000493795 SOGA1O94964 1423 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 HMGB1P09429 215 aaKnown RBP9.02□□□□□ -0.97
BRCA1-221ENST00000493795 IRX3P78415 501 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-221ENST00000493795 NBPF1Q3BBV0 1214 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 CCDC174Q6PII3 467 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 SYCP3Q8IZU3 236 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 ATRIPQ8WXE1 791 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 CCDC171Q6TFL3 1326 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 KIF5AQ12840 1032 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 FERMT3Q86UX7 667 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 CEP57Q86XR8 500 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 PPFIBP2Q8ND30 876 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 FAM184BQ9ULE4 1060 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 CCDC7Q96M83 1385 aa9.02□□□□□ -0.97
BRCA1-221ENST00000493795 HMGB2P26583 209 aaKnown RBP9.02□□□□□ -0.97
BRCA1-221ENST00000493795 ALDH3A1P30838 453 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms