RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-206ENST00000490101 RFC4P35249 363 aa23.67■■□□□ 1.38
SRM-206ENST00000490101 AKAP4Q5JQC9 854 aa23.67■■□□□ 1.38
SRM-206ENST00000490101 MYH14Q7Z406 1995 aaKnown RBP23.67■■□□□ 1.38
SRM-206ENST00000490101 DLG5Q8TDM6 1919 aa23.67■■□□□ 1.38
SRM-206ENST00000490101 NLGN1Q8N2Q7 840 aa23.66■■□□□ 1.38
SRM-206ENST00000490101 CDCA7LQ96GN5 454 aa23.66■■□□□ 1.38
SRM-206ENST00000490101 ATP10DQ9P241 1426 aa23.66■■□□□ 1.38
SRM-206ENST00000490101 IL16Q14005 1332 aa23.65■■□□□ 1.38
SRM-206ENST00000490101 HTATSF1O43719 755 aaKnown RBP23.65■■□□□ 1.38
SRM-206ENST00000490101 CRKLP46109 303 aaKnown RBP23.65■■□□□ 1.38
SRM-206ENST00000490101 SLFN5Q08AF3 891 aa23.65■■□□□ 1.38
SRM-206ENST00000490101 TRMT2AQ8IZ69 625 aaKnown RBP23.65■■□□□ 1.38
SRM-206ENST00000490101 E9PSI1 815 aa23.64■■□□□ 1.37
SRM-206ENST00000490101 GYS1P13807 737 aa23.64■■□□□ 1.37
SRM-206ENST00000490101 LGR6Q9HBX8 967 aa23.64■■□□□ 1.37
SRM-206ENST00000490101 C4AP0C0L4 1744 aa23.64■■□□□ 1.37
SRM-206ENST00000490101 TJP1Q07157 1748 aa23.64■■□□□ 1.37
SRM-206ENST00000490101 SLC52A2Q9HAB3 445 aa23.63■■□□□ 1.37
SRM-206ENST00000490101 PXDNLA1KZ92 1463 aa23.62■■□□□ 1.37
SRM-206ENST00000490101 CALD1Q05682 793 aaKnown RBP23.62■■□□□ 1.37
SRM-206ENST00000490101 N4BP2Q86UW6 1770 aaPredicted RBP23.61■■□□□ 1.37
SRM-206ENST00000490101 GNAT3A8MTJ3 354 aa23.61■■□□□ 1.37
SRM-206ENST00000490101 RNMTO43148 476 aaKnown RBP23.61■■□□□ 1.37
SRM-206ENST00000490101 ZNF526Q8TF50 670 aaPredicted RBP23.61■■□□□ 1.37
SRM-206ENST00000490101 SPINK5Q9NQ38 1064 aaPredicted RBP23.61■■□□□ 1.37
SRM-206ENST00000490101 SRP68Q9UHB9 627 aaKnown RBP23.61■■□□□ 1.37
SRM-206ENST00000490101 PARP3Q9Y6F1 533 aa23.61■■□□□ 1.37
SRM-206ENST00000490101 C10orf71Q711Q0 1435 aa23.6■■□□□ 1.37
SRM-206ENST00000490101 A0A0G2JLW4 131 aa23.6■■□□□ 1.37
SRM-206ENST00000490101 DUSP27Q5VZP5 1158 aa23.6■■□□□ 1.37
SRM-206ENST00000490101 CCDC87Q9NVE4 849 aa23.6■■□□□ 1.37
SRM-206ENST00000490101 KIF13BQ9NQT8 1826 aa23.6■■□□□ 1.37
SRM-206ENST00000490101 KIAA1551Q9HCM1 1747 aa23.59■■□□□ 1.37
SRM-206ENST00000490101 SLC39A6Q13433 755 aa23.59■■□□□ 1.37
SRM-206ENST00000490101 DNAJC10Q8IXB1 793 aa23.59■■□□□ 1.37
SRM-206ENST00000490101 RTF1Q92541 710 aaKnown RBP23.59■■□□□ 1.37
SRM-206ENST00000490101 VIRMAQ69YN4 1812 aaKnown RBP23.59■■□□□ 1.37
SRM-206ENST00000490101 MRC1P22897 1456 aa23.58■■□□□ 1.37
SRM-206ENST00000490101 GPBP1L1Q9HC44 474 aaPredicted RBP23.58■■□□□ 1.37
SRM-206ENST00000490101 BCS1LQ9Y276 419 aa23.58■■□□□ 1.37
SRM-206ENST00000490101 ADCY9O60503 1353 aa23.57■■□□□ 1.36
SRM-206ENST00000490101 TGFB2P61812 414 aa23.57■■□□□ 1.36
SRM-206ENST00000490101 MYH16Q9H6N6 1097 aa23.57■■□□□ 1.36
SRM-206ENST00000490101 USP42Q9H9J4 1324 aaKnown RBP23.57■■□□□ 1.36
SRM-206ENST00000490101 DCTN1Q14203 1278 aa23.56■■□□□ 1.36
SRM-206ENST00000490101 FKBP8Q14318 412 aa23.56■■□□□ 1.36
SRM-206ENST00000490101 INTS5Q6P9B9 1019 aaKnown RBP23.56■■□□□ 1.36
SRM-206ENST00000490101 THUMPD2Q9BTF0 503 aaKnown RBP23.56■■□□□ 1.36
SRM-206ENST00000490101 DPEP1P16444 411 aa23.55■■□□□ 1.36
SRM-206ENST00000490101 ZNF853P0CG23 659 aa23.54■■□□□ 1.36
SRM-206ENST00000490101 MCM10Q7L590 875 aa23.54■■□□□ 1.36
SRM-206ENST00000490101 IL17REQ8NFR9 667 aa23.54■■□□□ 1.36
SRM-206ENST00000490101 IFT57Q9NWB7 429 aa23.54■■□□□ 1.36
SRM-206ENST00000490101 CEP350Q5VT06 3117 aa23.54■■□□□ 1.36
SRM-206ENST00000490101 KCPQ6ZWJ8 1503 aa23.54■■□□□ 1.36
SRM-206ENST00000490101 GNAI1P63096 354 aa23.53■■□□□ 1.36
SRM-206ENST00000490101 ADAMTS7Q9UKP4 1686 aa23.52■■□□□ 1.36
SRM-206ENST00000490101 DDR1Q08345 913 aa23.52■■□□□ 1.36
SRM-206ENST00000490101 CEMIPQ8WUJ3 1361 aa23.52■■□□□ 1.36
SRM-206ENST00000490101 ZPR1O75312 459 aa23.51■■□□□ 1.35
SRM-206ENST00000490101 CYP19A1P11511 503 aaPredicted RBP23.51■■□□□ 1.35
SRM-206ENST00000490101 USPL1Q5W0Q7 1092 aa23.51■■□□□ 1.35
SRM-206ENST00000490101 CFAP44Q96MT7 982 aa23.51■■□□□ 1.35
SRM-206ENST00000490101 ARHGAP27Q6ZUM4 889 aa23.5■■□□□ 1.35
SRM-206ENST00000490101 SOS1Q07889 1333 aaPredicted RBP23.5■■□□□ 1.35
SRM-206ENST00000490101 ZBTB1Q9Y2K1 713 aa23.49■■□□□ 1.35
SRM-206ENST00000490101 FANCIQ9NVI1 1328 aa23.49■■□□□ 1.35
SRM-206ENST00000490101 CHL1O00533 1208 aa23.48■■□□□ 1.35
SRM-206ENST00000490101 TTC5Q8N0Z6 440 aa23.48■■□□□ 1.35
SRM-206ENST00000490101 COL15A1P39059 1388 aa23.48■■□□□ 1.35
SRM-206ENST00000490101 BRCA1P38398 1863 aaKnown RBP23.47■■□□□ 1.35
SRM-206ENST00000490101 KCNA3P22001 575 aa23.47■■□□□ 1.35
SRM-206ENST00000490101 BABAM1Q9NWV8 329 aa23.47■■□□□ 1.35
SRM-206ENST00000490101 POLRMTO00411 1230 aaKnown RBP23.46■■□□□ 1.35
SRM-206ENST00000490101 TEFQ10587 303 aa23.46■■□□□ 1.35
SRM-206ENST00000490101 UBR2Q8IWV8 1755 aa23.46■■□□□ 1.35
SRM-206ENST00000490101 TSR2Q969E8 191 aaKnown RBP23.46■■□□□ 1.35
SRM-206ENST00000490101 LAS1LQ9Y4W2 734 aaKnown RBP23.46■■□□□ 1.35
SRM-206ENST00000490101 CANXP27824 592 aaKnown RBP23.45■■□□□ 1.34
SRM-206ENST00000490101 TM4SF1P30408 202 aa23.45■■□□□ 1.34
SRM-206ENST00000490101 CHRNA5P30532 468 aa23.45■■□□□ 1.34
SRM-206ENST00000490101 TAF7Q15545 349 aaPredicted RBP23.45■■□□□ 1.34
SRM-206ENST00000490101 PIM2Q9P1W9 311 aa23.45■■□□□ 1.34
SRM-206ENST00000490101 VSIG10Q8N0Z9 540 aa23.44■■□□□ 1.34
SRM-206ENST00000490101 MBIPQ9NS73 344 aa23.44■■□□□ 1.34
SRM-206ENST00000490101 NARFQ9UHQ1 456 aa23.44■■□□□ 1.34
SRM-206ENST00000490101 RCAN3Q9UKA8 241 aa23.43■■□□□ 1.34
SRM-206ENST00000490101 CT47B1P0C2W7 299 aaPredicted RBP23.42■■□□□ 1.34
SRM-206ENST00000490101 DALRD3Q5D0E6 543 aaKnown RBP23.42■■□□□ 1.34
SRM-206ENST00000490101 ZNF496Q96IT1 587 aaPredicted RBP23.42■■□□□ 1.34
SRM-206ENST00000490101 ARFGEF1Q9Y6D6 1849 aa23.41■■□□□ 1.34
SRM-206ENST00000490101 STARD3NLO95772 234 aa23.41■■□□□ 1.34
SRM-206ENST00000490101 EXOSC9Q06265 439 aaKnown RBP23.41■■□□□ 1.34
SRM-206ENST00000490101 NFIXQ14938 502 aa23.41■■□□□ 1.34
SRM-206ENST00000490101 ZNF790Q6PG37 636 aa23.4■■□□□ 1.34
SRM-206ENST00000490101 AFDNP55196 1824 aaKnown RBP23.39■■□□□ 1.33
SRM-206ENST00000490101 BCL2L12Q9HB09 334 aa23.39■■□□□ 1.33
SRM-206ENST00000490101 TSPYL4Q9UJ04 414 aa23.39■■□□□ 1.33
SRM-206ENST00000490101 ZNF330Q9Y3S2 320 aaPredicted RBP23.39■■□□□ 1.33
SRM-206ENST00000490101 SIPA1L3O60292 1781 aaPredicted RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms