RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 DDX21Q9NR30 783 aaKnown RBP eCLIP16.33■□□□□ 0.2
TOP3A-206ENST00000489131 DDX19BQ9UMR2 479 aa16.33■□□□□ 0.2
TOP3A-206ENST00000489131 COG6Q9Y2V7 657 aa16.33■□□□□ 0.2
TOP3A-206ENST00000489131 TCERG1O14776 1098 aaKnown RBP16.32■□□□□ 0.2
TOP3A-206ENST00000489131 PDIA6Q15084 440 aa16.32■□□□□ 0.2
TOP3A-206ENST00000489131 G2E3Q7L622 706 aa16.32■□□□□ 0.2
TOP3A-206ENST00000489131 TMEM57Q8N5G2 664 aa16.32■□□□□ 0.2
TOP3A-206ENST00000489131 TEX13AQ9BXU3 409 aaPredicted RBP16.32■□□□□ 0.2
TOP3A-206ENST00000489131 HYPKQ9NX55 129 aa16.32■□□□□ 0.2
TOP3A-206ENST00000489131 CHPF2Q9P2E5 772 aa16.32■□□□□ 0.2
TOP3A-206ENST00000489131 TJP1Q07157 1748 aa16.31■□□□□ 0.2
TOP3A-206ENST00000489131 PRAMEF22A3QJZ6 481 aa16.31■□□□□ 0.2
TOP3A-206ENST00000489131 PRIM1P49642 420 aaKnown RBP16.31■□□□□ 0.2
TOP3A-206ENST00000489131 LRP10Q7Z4F1 713 aa16.31■□□□□ 0.2
TOP3A-206ENST00000489131 CLUAP1Q96AJ1 413 aa16.31■□□□□ 0.2
TOP3A-206ENST00000489131 CHMP4BQ9H444 224 aaKnown RBP16.31■□□□□ 0.2
TOP3A-206ENST00000489131 EIF2S2P20042 333 aaKnown RBP16.3■□□□□ 0.2
TOP3A-206ENST00000489131 ASAP1Q9ULH1 1129 aa16.3■□□□□ 0.2
TOP3A-206ENST00000489131 SBF2Q86WG5 1849 aa16.3■□□□□ 0.2
TOP3A-206ENST00000489131 RREB1Q92766 1687 aa16.3■□□□□ 0.2
TOP3A-206ENST00000489131 ATP10DQ9P241 1426 aa16.29■□□□□ 0.2
TOP3A-206ENST00000489131 SEPT12Q8IYM1 358 aa16.29■□□□□ 0.2
TOP3A-206ENST00000489131 USP16Q9Y5T5 823 aa16.29■□□□□ 0.2
TOP3A-206ENST00000489131 CCT4P50991 539 aaKnown RBP16.28■□□□□ 0.2
TOP3A-206ENST00000489131 RBM6P78332 1123 aaKnown RBP16.28■□□□□ 0.2
TOP3A-206ENST00000489131 ZBTB40Q9NUA8 1239 aa16.28■□□□□ 0.2
TOP3A-206ENST00000489131 ZBTB7BO15156 539 aaPredicted RBP16.27■□□□□ 0.2
TOP3A-206ENST00000489131 ITPRIPQ8IWB1 547 aa16.27■□□□□ 0.2
TOP3A-206ENST00000489131 NECTIN2Q92692 538 aa16.27■□□□□ 0.2
TOP3A-206ENST00000489131 SMARCC1Q92922 1105 aaPredicted RBP16.27■□□□□ 0.2
TOP3A-206ENST00000489131 CCDC136Q96JN2 1154 aa16.27■□□□□ 0.2
TOP3A-206ENST00000489131 ADCY9O60503 1353 aa16.26■□□□□ 0.19
TOP3A-206ENST00000489131 BRWD3Q6RI45 1802 aa16.26■□□□□ 0.19
TOP3A-206ENST00000489131 FKBP5Q13451 457 aaPredicted RBP16.26■□□□□ 0.19
TOP3A-206ENST00000489131 PROSER3Q2NL68 480 aa16.26■□□□□ 0.19
TOP3A-206ENST00000489131 PHAXQ9H814 394 aaKnown RBP16.26■□□□□ 0.19
TOP3A-206ENST00000489131 BTAF1O14981 1849 aa16.26■□□□□ 0.19
TOP3A-206ENST00000489131 COL5A3P25940 1745 aaPredicted RBP16.25■□□□□ 0.19
TOP3A-206ENST00000489131 PTCD1O75127 700 aaKnown RBP16.25■□□□□ 0.19
TOP3A-206ENST00000489131 B4GALNT3Q6L9W6 998 aa16.25■□□□□ 0.19
TOP3A-206ENST00000489131 SLC4A9Q96Q91 983 aa16.25■□□□□ 0.19
TOP3A-206ENST00000489131 KDM2BQ8NHM5 1336 aa16.24■□□□□ 0.19
TOP3A-206ENST00000489131 KSR2Q6VAB6 950 aa16.24■□□□□ 0.19
TOP3A-206ENST00000489131 SYTL4Q96C24 671 aaPredicted RBP16.24■□□□□ 0.19
TOP3A-206ENST00000489131 LY75O60449 1722 aa16.24■□□□□ 0.19
TOP3A-206ENST00000489131 PALLDQ8WX93 1383 aa16.24■□□□□ 0.19
TOP3A-206ENST00000489131 NUP188Q5SRE5 1749 aa16.23■□□□□ 0.19
TOP3A-206ENST00000489131 A0A0G2JS52 829 aa16.23■□□□□ 0.19
TOP3A-206ENST00000489131 NBPF26B4DH59 902 aa16.23■□□□□ 0.19
TOP3A-206ENST00000489131 STARD3NLO95772 234 aa16.23■□□□□ 0.19
TOP3A-206ENST00000489131 DDX58O95786 925 aaKnown RBP16.23■□□□□ 0.19
TOP3A-206ENST00000489131 MYT1Q01538 1121 aa16.23■□□□□ 0.19
TOP3A-206ENST00000489131 NBPF14Q5TI25 921 aa16.23■□□□□ 0.19
TOP3A-206ENST00000489131 NBPF10Q6P3W6 841 aaKnown RBP16.23■□□□□ 0.19
TOP3A-206ENST00000489131 NBPF15Q8N660 670 aa16.23■□□□□ 0.19
TOP3A-206ENST00000489131 ACSBG1Q96GR2 724 aa16.23■□□□□ 0.19
TOP3A-206ENST00000489131 F6X3S4 739 aa16.22■□□□□ 0.19
TOP3A-206ENST00000489131 KCNQ2O43526 872 aa16.22■□□□□ 0.19
TOP3A-206ENST00000489131 CYP19A1P11511 503 aaPredicted RBP16.22■□□□□ 0.19
TOP3A-206ENST00000489131 DNAAF4Q8WXU2 420 aa16.22■□□□□ 0.19
TOP3A-206ENST00000489131 ARFGEF2Q9Y6D5 1785 aa16.21■□□□□ 0.19
TOP3A-206ENST00000489131 LOC102724428A0A0B4J2F2 783 aa16.21■□□□□ 0.19
TOP3A-206ENST00000489131 PI4KAP2A4QPH2 592 aa16.21■□□□□ 0.19
TOP3A-206ENST00000489131 ANXA1P04083 346 aa16.21■□□□□ 0.19
TOP3A-206ENST00000489131 SIK1P57059 783 aa16.21■□□□□ 0.19
TOP3A-206ENST00000489131 BEND3Q5T5X7 828 aa16.21■□□□□ 0.19
TOP3A-206ENST00000489131 FAM196AQ6ZSG2 479 aa16.21■□□□□ 0.19
TOP3A-206ENST00000489131 KRT27Q7Z3Y8 459 aa16.21■□□□□ 0.19
TOP3A-206ENST00000489131 DNAJC10Q8IXB1 793 aa16.21■□□□□ 0.19
TOP3A-206ENST00000489131 PI4KAP1Q8N8J0 262 aa16.21■□□□□ 0.19
TOP3A-206ENST00000489131 RGS17Q9UGC6 210 aaPredicted RBP16.21■□□□□ 0.19
TOP3A-206ENST00000489131 ALDH1L1O75891 902 aa16.2■□□□□ 0.18
TOP3A-206ENST00000489131 HDAC1Q13547 482 aaPredicted RBP16.2■□□□□ 0.18
TOP3A-206ENST00000489131 CENPQQ7L2Z9 268 aaPredicted RBP16.2■□□□□ 0.18
TOP3A-206ENST00000489131 BCL11BQ9C0K0 894 aaPredicted RBP16.2■□□□□ 0.18
TOP3A-206ENST00000489131 PCDHB15Q9Y5E8 787 aa16.2■□□□□ 0.18
TOP3A-206ENST00000489131 COPS6Q7L5N1 327 aa16.19■□□□□ 0.18
TOP3A-206ENST00000489131 XAGE3Q8WTP9 111 aa16.19■□□□□ 0.18
TOP3A-206ENST00000489131 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
TOP3A-206ENST00000489131 A1BGP04217 495 aa16.18■□□□□ 0.18
TOP3A-206ENST00000489131 RXRBP28702 533 aa16.18■□□□□ 0.18
TOP3A-206ENST00000489131 LINS1Q8NG48 757 aa16.18■□□□□ 0.18
TOP3A-206ENST00000489131 PLBD2Q8NHP8 589 aa16.18■□□□□ 0.18
TOP3A-206ENST00000489131 SRCIN1Q9C0H9 1055 aa16.18■□□□□ 0.18
TOP3A-206ENST00000489131 MAP3K2Q9Y2U5 619 aa16.18■□□□□ 0.18
TOP3A-206ENST00000489131 KAT6BQ8WYB5 2073 aa16.18■□□□□ 0.18
TOP3A-206ENST00000489131 UTYO14607 1347 aa16.18■□□□□ 0.18
TOP3A-206ENST00000489131 MYL6BP14649 208 aa16.17■□□□□ 0.18
TOP3A-206ENST00000489131 IL6STP40189 918 aaPredicted RBP16.17■□□□□ 0.18
TOP3A-206ENST00000489131 SLC4A10Q6U841 1118 aa16.17■□□□□ 0.18
TOP3A-206ENST00000489131 ANKRD13DQ6ZTN6 518 aa16.17■□□□□ 0.18
TOP3A-206ENST00000489131 METTL22Q9BUU2 404 aaPredicted RBP16.17■□□□□ 0.18
TOP3A-206ENST00000489131 GNAI3P08754 354 aa16.16■□□□□ 0.18
TOP3A-206ENST00000489131 ITPK1Q13572 414 aa16.16■□□□□ 0.18
TOP3A-206ENST00000489131 MEIS3Q99687 375 aa16.16■□□□□ 0.18
TOP3A-206ENST00000489131 USP44Q9H0E7 712 aa16.16■□□□□ 0.18
TOP3A-206ENST00000489131 CNTNAP4Q9C0A0 1308 aa16.16■□□□□ 0.18
TOP3A-206ENST00000489131 COL15A1P39059 1388 aa16.15■□□□□ 0.18
TOP3A-206ENST00000489131 TAF1LQ8IZX4 1826 aa16.15■□□□□ 0.18
TOP3A-206ENST00000489131 ATP6V1AP38606 617 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms