RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 C21orf2O43822 256 aa6.19□□□□□ -1.42
RBM28-207ENST00000488249 LGR5O75473 907 aa6.19□□□□□ -1.42
RBM28-207ENST00000488249 WFS1O76024 890 aa6.19□□□□□ -1.42
RBM28-207ENST00000488249 MSX1P28360 303 aa6.19□□□□□ -1.42
RBM28-207ENST00000488249 NOS2P35228 1153 aa6.19□□□□□ -1.42
RBM28-207ENST00000488249 PSMA6P60900 246 aaKnown RBP6.19□□□□□ -1.42
RBM28-207ENST00000488249 SWI5Q1ZZU3 235 aa6.19□□□□□ -1.42
RBM28-207ENST00000488249 TMEM164Q5U3C3 297 aa6.19□□□□□ -1.42
RBM28-207ENST00000488249 TREML4Q6UXN2 200 aa6.19□□□□□ -1.42
RBM28-207ENST00000488249 RIPOR1Q6ZS17 1223 aa6.19□□□□□ -1.42
RBM28-207ENST00000488249 GAS2L2Q8NHY3 880 aa6.19□□□□□ -1.42
RBM28-207ENST00000488249 SCG3Q8WXD2 468 aaKnown RBP6.19□□□□□ -1.42
RBM28-207ENST00000488249 NANOS1Q8WY41 292 aaKnown RBP6.19□□□□□ -1.42
RBM28-207ENST00000488249 L3MBTL2Q969R5 705 aa6.19□□□□□ -1.42
RBM28-207ENST00000488249 AIDAQ96BJ3 306 aa6.19□□□□□ -1.42
RBM28-207ENST00000488249 CUEDC1Q9NWM3 386 aaPredicted RBP6.19□□□□□ -1.42
RBM28-207ENST00000488249 PARP3Q9Y6F1 533 aa6.19□□□□□ -1.42
RBM28-207ENST00000488249 SERTM1A2A2V5 107 aa6.18□□□□□ -1.42
RBM28-207ENST00000488249 PPP1R12BO60237 982 aaPredicted RBP6.18□□□□□ -1.42
RBM28-207ENST00000488249 FAM69CQ0P6D2 419 aa6.18□□□□□ -1.42
RBM28-207ENST00000488249 NBPF1Q3BBV0 1214 aa6.18□□□□□ -1.42
RBM28-207ENST00000488249 TRIM22Q8IYM9 498 aa6.18□□□□□ -1.42
RBM28-207ENST00000488249 C1orf216Q8TAB5 229 aa6.18□□□□□ -1.42
RBM28-207ENST00000488249 IRF7Q92985 503 aa6.18□□□□□ -1.42
RBM28-207ENST00000488249 GMCL1Q96IK5 515 aa6.18□□□□□ -1.42
RBM28-207ENST00000488249 GPAMQ9HCL2 828 aa6.18□□□□□ -1.42
RBM28-207ENST00000488249 ZNF232Q9UNY5 417 aa6.18□□□□□ -1.42
RBM28-207ENST00000488249 CHMP3Q9Y3E7 222 aa6.18□□□□□ -1.42
RBM28-207ENST00000488249 ERBB4Q15303 1308 aa6.18□□□□□ -1.42
RBM28-207ENST00000488249 CDC14CA4D256 554 aa6.17□□□□□ -1.42
RBM28-207ENST00000488249 H7C1W4 665 aa6.17□□□□□ -1.42
RBM28-207ENST00000488249 EML1O00423 815 aa6.17□□□□□ -1.42
RBM28-207ENST00000488249 VSIG8P0DPA2 414 aa6.17□□□□□ -1.42
RBM28-207ENST00000488249 IGFBP4P22692 258 aa6.17□□□□□ -1.42
RBM28-207ENST00000488249 WEE1P30291 646 aa6.17□□□□□ -1.42
RBM28-207ENST00000488249 DBN1Q16643 649 aa6.17□□□□□ -1.42
RBM28-207ENST00000488249 LCE2AQ5TA79 106 aaPredicted RBP6.17□□□□□ -1.42
RBM28-207ENST00000488249 POTEAQ6S8J7 498 aa6.17□□□□□ -1.42
RBM28-207ENST00000488249 SV2AQ7L0J3 742 aa6.17□□□□□ -1.42
RBM28-207ENST00000488249 VWA5B2Q8N398 1253 aa6.17□□□□□ -1.42
RBM28-207ENST00000488249 STAG2Q8N3U4 1231 aa6.17□□□□□ -1.42
RBM28-207ENST00000488249 ZDHHC3Q9NYG2 299 aa6.17□□□□□ -1.42
RBM28-207ENST00000488249 CSB-PGBD3P0DP91 1061 aa6.16□□□□□ -1.42
RBM28-207ENST00000488249 TATP17735 454 aaPredicted RBP6.16□□□□□ -1.42
RBM28-207ENST00000488249 ATP4AP20648 1035 aa6.16□□□□□ -1.42
RBM28-207ENST00000488249 TXLNAP40222 546 aa6.16□□□□□ -1.42
RBM28-207ENST00000488249 HIRAP54198 1017 aaPredicted RBP6.16□□□□□ -1.42
RBM28-207ENST00000488249 LCE2CQ5TA81 110 aa6.16□□□□□ -1.42
RBM28-207ENST00000488249 SH3PXD2AQ5TCZ1 1133 aa6.16□□□□□ -1.42
RBM28-207ENST00000488249 PGBD3Q8N328 593 aa6.16□□□□□ -1.42
RBM28-207ENST00000488249 CHMP7Q8WUX9 453 aaPredicted RBP6.16□□□□□ -1.42
RBM28-207ENST00000488249 ZNF837Q96EG3 531 aaPredicted RBP6.16□□□□□ -1.42
RBM28-207ENST00000488249 C2orf49Q9BVC5 232 aaPredicted RBP6.16□□□□□ -1.42
RBM28-207ENST00000488249 RUBCNLQ9H714 662 aa6.16□□□□□ -1.42
RBM28-207ENST00000488249 GPR161Q8N6U8 529 aaKnown RBP6.15□□□□□ -1.42
RBM28-207ENST00000488249 PRIMPOLQ96LW4 560 aa6.15□□□□□ -1.42
RBM28-207ENST00000488249 NUCKS1Q9H1E3 243 aaKnown RBP6.15□□□□□ -1.42
RBM28-207ENST00000488249 CRISPLD1Q9H336 500 aa6.15□□□□□ -1.42
RBM28-207ENST00000488249 HCN4Q9Y3Q4 1203 aa6.15□□□□□ -1.42
RBM28-207ENST00000488249 FOXO3O43524 673 aa6.14□□□□□ -1.43
RBM28-207ENST00000488249 PRMT3O60678 531 aa6.14□□□□□ -1.43
RBM28-207ENST00000488249 THBS1P07996 1170 aa6.14□□□□□ -1.43
RBM28-207ENST00000488249 LBRQ14739 615 aaKnown RBP6.14□□□□□ -1.43
RBM28-207ENST00000488249 ARSJQ5FYB0 599 aaPredicted RBP6.14□□□□□ -1.43
RBM28-207ENST00000488249 EFHC2Q5JST6 749 aa6.14□□□□□ -1.43
RBM28-207ENST00000488249 C1orf53Q5VUE5 145 aa6.14□□□□□ -1.43
RBM28-207ENST00000488249 CLP1Q92989 425 aaKnown RBP6.14□□□□□ -1.43
RBM28-207ENST00000488249 ZIC5Q96T25 663 aa6.14□□□□□ -1.43
RBM28-207ENST00000488249 A0A1W2PNR3 127 aa6.13□□□□□ -1.43
RBM28-207ENST00000488249 TMEM88BA6NKF7 163 aa6.13□□□□□ -1.43
RBM28-207ENST00000488249 OCLNQ16625 522 aa6.13□□□□□ -1.43
RBM28-207ENST00000488249 FOXR1Q6PIV2 292 aa6.13□□□□□ -1.43
RBM28-207ENST00000488249 BICDL1Q6ZP65 573 aa6.13□□□□□ -1.43
RBM28-207ENST00000488249 NLRP8Q86W28 1048 aa6.13□□□□□ -1.43
RBM28-207ENST00000488249 ALDH16A1Q8IZ83 802 aa6.13□□□□□ -1.43
RBM28-207ENST00000488249 C7orf43Q8WVR3 580 aa6.13□□□□□ -1.43
RBM28-207ENST00000488249 GTPBP3Q969Y2 492 aaKnown RBP6.13□□□□□ -1.43
RBM28-207ENST00000488249 PHACTR1Q9C0D0 580 aa6.13□□□□□ -1.43
RBM28-207ENST00000488249 GMPRP36959 345 aa6.12□□□□□ -1.43
RBM28-207ENST00000488249 UBAP2LQ14157 1087 aaKnown RBP6.12□□□□□ -1.43
RBM28-207ENST00000488249 RHPN1Q8TCX5 695 aa6.12□□□□□ -1.43
RBM28-207ENST00000488249 CXXC1Q9P0U4 656 aaPredicted RBP6.12□□□□□ -1.43
RBM28-207ENST00000488249 SLAIN2Q9P270 581 aa6.12□□□□□ -1.43
RBM28-207ENST00000488249 GPC6Q9Y625 555 aaPredicted RBP6.12□□□□□ -1.43
RBM28-207ENST00000488249 GPR25O00155 361 aa6.11□□□□□ -1.43
RBM28-207ENST00000488249 FKBP5Q13451 457 aaPredicted RBP6.11□□□□□ -1.43
RBM28-207ENST00000488249 VTI1AQ96AJ9 217 aa6.11□□□□□ -1.43
RBM28-207ENST00000488249 NGLY1Q96IV0 654 aa6.11□□□□□ -1.43
RBM28-207ENST00000488249 TRERF1Q96PN7 1200 aa6.11□□□□□ -1.43
RBM28-207ENST00000488249 COL25A1Q9BXS0 654 aaPredicted RBP6.11□□□□□ -1.43
RBM28-207ENST00000488249 ZCCHC2Q9C0B9 1178 aaKnown RBP6.11□□□□□ -1.43
RBM28-207ENST00000488249 GJA3Q9Y6H8 435 aa6.11□□□□□ -1.43
RBM28-207ENST00000488249 CARNS1A5YM72 827 aa6.1□□□□□ -1.43
RBM28-207ENST00000488249 ATP2B4P23634 1241 aa6.1□□□□□ -1.43
RBM28-207ENST00000488249 FIGNL1Q6PIW4 674 aa6.1□□□□□ -1.43
RBM28-207ENST00000488249 CFHR5Q9BXR6 569 aa6.1□□□□□ -1.43
RBM28-207ENST00000488249 NEUROD4Q9HD90 331 aa6.1□□□□□ -1.43
RBM28-207ENST00000488249 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.1□□□□□ -1.434e-7■■■■■ 67.9
RBM28-207ENST00000488249 USTQ9Y2C2 406 aa6.1□□□□□ -1.43
RBM28-207ENST00000488249 WIPF1O43516 503 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms