RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 CHRNA4P43681 627 aa6.12□□□□□ -1.43
PRPF38B-205ENST00000485810 SCNN1DP51172 638 aa6.12□□□□□ -1.43
PRPF38B-205ENST00000485810 RHBDD1Q8TEB9 315 aa6.12□□□□□ -1.43
PRPF38B-205ENST00000485810 ESF1Q9H501 851 aaKnown RBP6.12□□□□□ -1.43
PRPF38B-205ENST00000485810 GDPD2Q9HCC8 539 aa6.12□□□□□ -1.43
PRPF38B-205ENST00000485810 ZNF330Q9Y3S2 320 aaPredicted RBP6.12□□□□□ -1.43
PRPF38B-205ENST00000485810 PIK3R2O00459 728 aa6.11□□□□□ -1.43
PRPF38B-205ENST00000485810 ARAFP10398 606 aa6.11□□□□□ -1.43
PRPF38B-205ENST00000485810 IRF5Q13568 498 aa6.11□□□□□ -1.43
PRPF38B-205ENST00000485810 EFHC2Q5JST6 749 aa6.11□□□□□ -1.43
PRPF38B-205ENST00000485810 RNF135Q8IUD6 432 aa6.11□□□□□ -1.43
PRPF38B-205ENST00000485810 ZNF592Q92610 1267 aa6.11□□□□□ -1.43
PRPF38B-205ENST00000485810 CDK11AQ9UQ88 783 aaPredicted RBP6.11□□□□□ -1.43
PRPF38B-205ENST00000485810 NEURL1BA8MQ27 555 aa6.1□□□□□ -1.43
PRPF38B-205ENST00000485810 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.1□□□□□ -1.43
PRPF38B-205ENST00000485810 CSB-PGBD3P0DP91 1061 aa6.1□□□□□ -1.43
PRPF38B-205ENST00000485810 ABL2P42684 1182 aa6.1□□□□□ -1.43
PRPF38B-205ENST00000485810 VAC14Q08AM6 782 aa6.1□□□□□ -1.43
PRPF38B-205ENST00000485810 ESCO1Q5FWF5 840 aa6.1□□□□□ -1.43
PRPF38B-205ENST00000485810 PGBD3Q8N328 593 aa6.1□□□□□ -1.43
PRPF38B-205ENST00000485810 GNB5O14775 395 aa6.09□□□□□ -1.43
PRPF38B-205ENST00000485810 CDK11BP21127 795 aaKnown RBP6.09□□□□□ -1.43
PRPF38B-205ENST00000485810 AMPD1P23109 780 aa6.09□□□□□ -1.43
PRPF38B-205ENST00000485810 PLA2G4AP47712 749 aa6.09□□□□□ -1.43
PRPF38B-205ENST00000485810 TNP2Q05952 138 aa6.09□□□□□ -1.43
PRPF38B-205ENST00000485810 TLR1Q15399 786 aa6.09□□□□□ -1.43
PRPF38B-205ENST00000485810 FCHSD1Q86WN1 690 aa6.09□□□□□ -1.43
PRPF38B-205ENST00000485810 KRTAP9-2Q9BYQ4 174 aa6.09□□□□□ -1.43
PRPF38B-205ENST00000485810 PCDHGC4Q9Y5F7 938 aa6.09□□□□□ -1.43
PRPF38B-205ENST00000485810 USP3Q9Y6I4 520 aa6.09□□□□□ -1.43
PRPF38B-205ENST00000485810 TRIM11Q96F44 468 aa6.08□□□□□ -1.44
PRPF38B-205ENST00000485810 DOLKQ9UPQ8 538 aa6.08□□□□□ -1.44
PRPF38B-205ENST00000485810 CCDC9Q9Y3X0 531 aaKnown RBP6.08□□□□□ -1.44
PRPF38B-205ENST00000485810 APBB1O00213 710 aa6.07□□□□□ -1.44
PRPF38B-205ENST00000485810 INHAP05111 366 aa6.07□□□□□ -1.44
PRPF38B-205ENST00000485810 MAPTP10636 758 aaKnown RBP6.07□□□□□ -1.44
PRPF38B-205ENST00000485810 USP4Q13107 963 aa6.07□□□□□ -1.44
PRPF38B-205ENST00000485810 MCM6Q14566 821 aa6.07□□□□□ -1.44
PRPF38B-205ENST00000485810 CHSY3Q70JA7 882 aa6.07□□□□□ -1.44
PRPF38B-205ENST00000485810 NLRP8Q86W28 1048 aa6.07□□□□□ -1.44
PRPF38B-205ENST00000485810 PSMG3-AS1Q96PY0 264 aa6.07□□□□□ -1.44
PRPF38B-205ENST00000485810 KRTAP9-6A0A140TA67 174 aa6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 ATXN7O15265 892 aaPredicted RBP6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 CD33P20138 364 aa6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 GTF2E1P29083 439 aaPredicted RBP6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 GDF10P55107 478 aa6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 OXLD1Q5BKU9 147 aa6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 TBC1D9Q6ZT07 1266 aa6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 STRN4Q9NRL3 753 aa6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 IQSEC3Q9UPP2 1182 aaPredicted RBP6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 RSF1Q96T23 1441 aaPredicted RBP6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 A0A1W2PNR3 127 aa6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 DCDC2BA2VCK2 349 aa6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 TMEM229AB2RXF0 380 aa6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 SMTNP53814 917 aa6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 DOC2BQ14184 412 aa6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 FAM182BQ5T319 152 aa6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 POM121Q96HA1 1249 aa6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 ZIC5Q96T25 663 aa6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 MDFIQ99750 246 aa6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 PRM3Q9NNZ6 103 aa6.06□□□□□ -1.44
PRPF38B-205ENST00000485810 LOC105371045A0A1W2PR82 267 aa6.05□□□□□ -1.44
PRPF38B-205ENST00000485810 FOXD4L6Q3SYB3 417 aaPredicted RBP6.05□□□□□ -1.44
PRPF38B-205ENST00000485810 FIGNL1Q6PIW4 674 aa6.05□□□□□ -1.44
PRPF38B-205ENST00000485810 FOXD4L3Q6VB84 417 aaPredicted RBP6.05□□□□□ -1.44
PRPF38B-205ENST00000485810 C1orf216Q8TAB5 229 aa6.05□□□□□ -1.44
PRPF38B-205ENST00000485810 SLC4A9Q96Q91 983 aa6.05□□□□□ -1.44
PRPF38B-205ENST00000485810 COG6Q9Y2V7 657 aa6.05□□□□□ -1.44
PRPF38B-205ENST00000485810 NACADO15069 1562 aa6.04□□□□□ -1.44
PRPF38B-205ENST00000485810 PCBP4P57723 403 aaKnown RBP6.04□□□□□ -1.44
PRPF38B-205ENST00000485810 EIF4G2P78344 907 aaKnown RBP eCLIP6.04□□□□□ -1.44
PRPF38B-205ENST00000485810 MTFR1Q15390 333 aa6.04□□□□□ -1.44
PRPF38B-205ENST00000485810 SLFNL1Q499Z3 407 aa6.04□□□□□ -1.44
PRPF38B-205ENST00000485810 AIDAQ96BJ3 306 aa6.04□□□□□ -1.44
PRPF38B-205ENST00000485810 NIFKQ9BYG3 293 aaKnown RBP6.04□□□□□ -1.44
PRPF38B-205ENST00000485810 SEMA6BQ9H3T3 888 aa6.04□□□□□ -1.44
PRPF38B-205ENST00000485810 ADH6P28332 368 aa6.03□□□□□ -1.44
PRPF38B-205ENST00000485810 COL9A3Q14050 684 aaPredicted RBP6.03□□□□□ -1.44
PRPF38B-205ENST00000485810 PLVAPQ9BX97 442 aa6.03□□□□□ -1.44
PRPF38B-205ENST00000485810 AVENQ9NQS1 362 aaPredicted RBP6.03□□□□□ -1.44
PRPF38B-205ENST00000485810 SERTAD1Q9UHV2 236 aa6.03□□□□□ -1.44
PRPF38B-205ENST00000485810 RB1CC1Q8TDY2 1594 aa6.02□□□□□ -1.45
PRPF38B-205ENST00000485810 ZBTB7CA1YPR0 619 aa6.02□□□□□ -1.45
PRPF38B-205ENST00000485810 CDK2AP1O14519 115 aa6.02□□□□□ -1.45
PRPF38B-205ENST00000485810 KHNYNO15037 678 aaKnown RBP6.02□□□□□ -1.45
PRPF38B-205ENST00000485810 EFSO43281 561 aa6.02□□□□□ -1.45
PRPF38B-205ENST00000485810 HSP90B1P14625 803 aaKnown RBP6.02□□□□□ -1.45
PRPF38B-205ENST00000485810 RSPO4Q2I0M5 234 aaPredicted RBP6.02□□□□□ -1.45
PRPF38B-205ENST00000485810 ZNF468Q5VIY5 522 aaPredicted RBP6.02□□□□□ -1.45
PRPF38B-205ENST00000485810 C7orf43Q8WVR3 580 aa6.02□□□□□ -1.45
PRPF38B-205ENST00000485810 NOP53Q9NZM5 478 aaKnown RBP6.02□□□□□ -1.45
PRPF38B-205ENST00000485810 PCDHGA11Q9Y5H2 935 aa6.02□□□□□ -1.45
PRPF38B-205ENST00000485810 A6NJY4 79 aa6.01□□□□□ -1.45
PRPF38B-205ENST00000485810 FAM157BP0CG42 384 aa6.01□□□□□ -1.45
PRPF38B-205ENST00000485810 NKAPLQ5M9Q1 402 aa6.01□□□□□ -1.45
PRPF38B-205ENST00000485810 PLPP7Q8NBV4 271 aa6.01□□□□□ -1.45
PRPF38B-205ENST00000485810 ZDHHC1Q8WTX9 485 aa6.01□□□□□ -1.45
PRPF38B-205ENST00000485810 PARP3Q9Y6F1 533 aa6.01□□□□□ -1.45
PRPF38B-205ENST00000485810 PIK3CDO00329 1044 aa6□□□□□ -1.45
PRPF38B-205ENST00000485810 TXLNAP40222 546 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms