RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 SH3PXD2AQ5TCZ1 1133 aa8.86□□□□□ -0.99
SRRM1-213ENST00000485441 C16orf46Q6P387 395 aa8.86□□□□□ -0.99
SRRM1-213ENST00000485441 GLYCTKQ8IVS8 523 aa8.86□□□□□ -0.99
SRRM1-213ENST00000485441 MEIOBQ8N635 442 aa8.86□□□□□ -0.99
SRRM1-213ENST00000485441 MYO19Q96H55 970 aa8.86□□□□□ -0.99
SRRM1-213ENST00000485441 GRIP2Q9C0E4 1043 aa8.86□□□□□ -0.99
SRRM1-213ENST00000485441 ZNF395Q9H8N7 513 aaPredicted RBP8.86□□□□□ -0.99
SRRM1-213ENST00000485441 QTRT2Q9H974 415 aaKnown RBP8.86□□□□□ -0.99
SRRM1-213ENST00000485441 BIN2Q9UBW5 565 aaPredicted RBP8.86□□□□□ -0.99
SRRM1-213ENST00000485441 LRFN2Q9ULH4 789 aa8.86□□□□□ -0.99
SRRM1-213ENST00000485441 NOS2P35228 1153 aa8.85□□□□□ -0.99
SRRM1-213ENST00000485441 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.85□□□□□ -0.994e-22■■■■■ 237.6
SRRM1-213ENST00000485441 RBM47A0AV96 593 aaKnown RBP8.84□□□□□ -0.99
SRRM1-213ENST00000485441 MEN1O00255 615 aa8.84□□□□□ -0.99
SRRM1-213ENST00000485441 C7orf43Q8WVR3 580 aa8.84□□□□□ -0.99
SRRM1-213ENST00000485441 GPC1P35052 558 aa8.83□□□□□ -1
SRRM1-213ENST00000485441 RNF144AP50876 292 aaPredicted RBP8.83□□□□□ -1
SRRM1-213ENST00000485441 FAM26DQ5JW98 314 aa8.83□□□□□ -1
SRRM1-213ENST00000485441 NPAS4Q8IUM7 802 aa8.83□□□□□ -1
SRRM1-213ENST00000485441 NBPF15Q8N660 670 aa8.83□□□□□ -1
SRRM1-213ENST00000485441 L3MBTL2Q969R5 705 aa8.83□□□□□ -1
SRRM1-213ENST00000485441 VTI1AQ96AJ9 217 aa8.83□□□□□ -1
SRRM1-213ENST00000485441 NLRP3Q96P20 1036 aa8.83□□□□□ -1
SRRM1-213ENST00000485441 SERTM1A2A2V5 107 aa8.82□□□□□ -1
SRRM1-213ENST00000485441 SPINT1O43278 529 aa8.82□□□□□ -1
SRRM1-213ENST00000485441 FAM13AO94988 1023 aa8.82□□□□□ -1
SRRM1-213ENST00000485441 ZSCAN10Q96SZ4 725 aaPredicted RBP8.82□□□□□ -1
SRRM1-213ENST00000485441 DCTN4Q9UJW0 460 aa8.82□□□□□ -1
SRRM1-213ENST00000485441 ANKRD33BA6NCL7 494 aa8.81□□□□□ -1
SRRM1-213ENST00000485441 MPSTP25325 297 aa8.81□□□□□ -1
SRRM1-213ENST00000485441 ALDH16A1Q8IZ83 802 aa8.81□□□□□ -1
SRRM1-213ENST00000485441 TSEN34Q9BSV6 310 aaKnown RBP8.81□□□□□ -1
SRRM1-213ENST00000485441 STIM2Q9P246 746 aa8.81□□□□□ -1
SRRM1-213ENST00000485441 HCN4Q9Y3Q4 1203 aa8.81□□□□□ -1
SRRM1-213ENST00000485441 RBM25P49756 843 aaKnown RBP8.8□□□□□ -1
SRRM1-213ENST00000485441 RHBDD1Q8TEB9 315 aa8.8□□□□□ -1
SRRM1-213ENST00000485441 ASB16Q96NS5 453 aa8.8□□□□□ -1
SRRM1-213ENST00000485441 NIFKQ9BYG3 293 aaKnown RBP8.8□□□□□ -1
SRRM1-213ENST00000485441 CABP1Q9NZU7 370 aa8.8□□□□□ -1
SRRM1-213ENST00000485441 PARP3Q9Y6F1 533 aa8.8□□□□□ -1
SRRM1-213ENST00000485441 UNCXA6NJT0 531 aa8.79□□□□□ -1
SRRM1-213ENST00000485441 ZBTB39O15060 712 aa8.79□□□□□ -1
SRRM1-213ENST00000485441 C1orf53Q5VUE5 145 aa8.79□□□□□ -1
SRRM1-213ENST00000485441 INSM2Q96T92 566 aaPredicted RBP8.79□□□□□ -1
SRRM1-213ENST00000485441 RBCK1Q9BYM8 510 aa8.79□□□□□ -1
SRRM1-213ENST00000485441 SPATA31C2B4DYI2 1134 aa8.78□□□□□ -1
SRRM1-213ENST00000485441 CAPN5O15484 640 aaPredicted RBP8.78□□□□□ -1
SRRM1-213ENST00000485441 FZD6O60353 706 aa8.78□□□□□ -1
SRRM1-213ENST00000485441 RGS20O76081 388 aa8.78□□□□□ -1
SRRM1-213ENST00000485441 AVPP01185 164 aa8.78□□□□□ -1
SRRM1-213ENST00000485441 IGHA2P01877 340 aa8.78□□□□□ -1
SRRM1-213ENST00000485441 RANGAP1P46060 587 aaPredicted RBP8.78□□□□□ -1
SRRM1-213ENST00000485441 EIF1AXP47813 144 aaKnown RBP8.78□□□□□ -1
SRRM1-213ENST00000485441 RTN1Q16799 776 aa8.78□□□□□ -1
SRRM1-213ENST00000485441 C4orf17Q53FE4 359 aa8.78□□□□□ -1
SRRM1-213ENST00000485441 CHMP3Q9Y3E7 222 aa8.78□□□□□ -1
SRRM1-213ENST00000485441 MAPK1P28482 360 aa8.77□□□□□ -1.01
SRRM1-213ENST00000485441 TXLNAP40222 546 aa8.77□□□□□ -1.01
SRRM1-213ENST00000485441 CTSOP43234 321 aaPredicted RBP8.77□□□□□ -1.01
SRRM1-213ENST00000485441 C11orf91Q3C1V1 193 aa8.77□□□□□ -1.01
SRRM1-213ENST00000485441 TMEM214Q6NUQ4 689 aaKnown RBP8.77□□□□□ -1.01
SRRM1-213ENST00000485441 FBXO33Q7Z6M2 555 aa8.77□□□□□ -1.01
SRRM1-213ENST00000485441 LINC00528Q8N1L1 170 aa8.77□□□□□ -1.01
SRRM1-213ENST00000485441 PHACTR1Q9C0D0 580 aa8.77□□□□□ -1.01
SRRM1-213ENST00000485441 ZNF232Q9UNY5 417 aa8.77□□□□□ -1.01
SRRM1-213ENST00000485441 BRD2P25440 801 aaKnown RBP8.76□□□□□ -1.01
SRRM1-213ENST00000485441 ETFBKMTQ8IXQ9 262 aa8.76□□□□□ -1.01
SRRM1-213ENST00000485441 CCDC87Q9NVE4 849 aa8.76□□□□□ -1.01
SRRM1-213ENST00000485441 BCS1LQ9Y276 419 aa8.76□□□□□ -1.01
SRRM1-213ENST00000485441 ZNF16P17020 682 aaPredicted RBP8.75□□□□□ -1.01
SRRM1-213ENST00000485441 COL19A1Q14993 1142 aa8.75□□□□□ -1.01
SRRM1-213ENST00000485441 ALKBH2Q6NS38 261 aa8.75□□□□□ -1.01
SRRM1-213ENST00000485441 RGL4Q8IZJ4 473 aa8.75□□□□□ -1.01
SRRM1-213ENST00000485441 NGLY1Q96IV0 654 aa8.75□□□□□ -1.01
SRRM1-213ENST00000485441 CITED4Q96RK1 184 aa8.75□□□□□ -1.01
SRRM1-213ENST00000485441 DGKZQ13574 1117 aa8.74□□□□□ -1.01
SRRM1-213ENST00000485441 WDR44Q5JSH3 913 aa8.74□□□□□ -1.01
SRRM1-213ENST00000485441 SLC27A3Q5K4L6 730 aa8.74□□□□□ -1.01
SRRM1-213ENST00000485441 ZSCAN29Q8IWY8 852 aaPredicted RBP8.74□□□□□ -1.01
SRRM1-213ENST00000485441 KLRG1Q96E93 195 aa8.74□□□□□ -1.01
SRRM1-213ENST00000485441 KLK14Q9P0G3 267 aa8.74□□□□□ -1.01
SRRM1-213ENST00000485441 PDZRN3Q9UPQ7 1066 aa8.74□□□□□ -1.01
SRRM1-213ENST00000485441 DSC3Q14574 896 aa8.73□□□□□ -1.01
SRRM1-213ENST00000485441 GNASQ5JWF2 1037 aa8.73□□□□□ -1.01
SRRM1-213ENST00000485441 MRPL14Q6P1L8 145 aaKnown RBP8.73□□□□□ -1.01
SRRM1-213ENST00000485441 TMC7Q7Z402 723 aa8.73□□□□□ -1.01
SRRM1-213ENST00000485441 ABTB2Q8N961 1025 aa8.73□□□□□ -1.01
SRRM1-213ENST00000485441 RNF217Q8TC41 542 aa8.73□□□□□ -1.01
SRRM1-213ENST00000485441 IFT43Q96FT9 208 aa8.73□□□□□ -1.01
SRRM1-213ENST00000485441 ZDHHC3Q9NYG2 299 aa8.73□□□□□ -1.01
SRRM1-213ENST00000485441 E9PSI1 815 aa8.72□□□□□ -1.01
SRRM1-213ENST00000485441 SMCPP49901 116 aaPredicted RBP8.72□□□□□ -1.01
SRRM1-213ENST00000485441 TAGLNQ01995 201 aaKnown RBP8.72□□□□□ -1.01
SRRM1-213ENST00000485441 POU4F2Q12837 409 aa8.72□□□□□ -1.01
SRRM1-213ENST00000485441 ATCAYQ86WG3 371 aa8.72□□□□□ -1.01
SRRM1-213ENST00000485441 FAM129BQ96TA1 746 aa8.72□□□□□ -1.01
SRRM1-213ENST00000485441 BCL2L13Q9BXK5 485 aa8.72□□□□□ -1.01
SRRM1-213ENST00000485441 KIAA1522Q9P206 1035 aaPredicted RBP8.72□□□□□ -1.01
SRRM1-213ENST00000485441 DMGDHQ9UI17 866 aaKnown RBP8.72□□□□□ -1.01
SRRM1-213ENST00000485441 GTF2E1P29083 439 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms