RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 BTBD11A6QL63 1104 aa17.68■□□□□ 0.42
RXRA-203ENST00000484822 ZSCAN12O43309 604 aa17.68■□□□□ 0.42
RXRA-203ENST00000484822 RBM27Q9P2N5 1060 aaKnown RBP17.68■□□□□ 0.42
RXRA-203ENST00000484822 SRGAP3O43295 1099 aa17.68■□□□□ 0.42
RXRA-203ENST00000484822 SLC3A2P08195 630 aaKnown RBP17.68■□□□□ 0.42
RXRA-203ENST00000484822 KIF4BQ2VIQ3 1234 aa17.68■□□□□ 0.42
RXRA-203ENST00000484822 JAKMIP3Q5VZ66 844 aa17.68■□□□□ 0.42
RXRA-203ENST00000484822 MCM5P33992 734 aa17.68■□□□□ 0.42
RXRA-203ENST00000484822 DYDC1Q8WWB3 177 aa17.67■□□□□ 0.42
RXRA-203ENST00000484822 ZRSR2Q15696 482 aaKnown RBP17.67■□□□□ 0.42
RXRA-203ENST00000484822 AMOTQ4VCS5 1084 aa17.67■□□□□ 0.42
RXRA-203ENST00000484822 AACSQ86V21 672 aa17.67■□□□□ 0.42
RXRA-203ENST00000484822 CADPS2Q86UW7 1296 aa17.67■□□□□ 0.42
RXRA-203ENST00000484822 RIMS2Q9UQ26 1411 aa17.67■□□□□ 0.42
RXRA-203ENST00000484822 RPAP2Q8IXW5 612 aaPredicted RBP17.66■□□□□ 0.42
RXRA-203ENST00000484822 CCDC148Q8NFR7 591 aa17.66■□□□□ 0.42
RXRA-203ENST00000484822 ZFP91Q96JP5 570 aaPredicted RBP17.66■□□□□ 0.42
RXRA-203ENST00000484822 TMX1Q9H3N1 280 aa17.66■□□□□ 0.42
RXRA-203ENST00000484822 ZHX3Q9H4I2 956 aa17.66■□□□□ 0.42
RXRA-203ENST00000484822 DISP3Q9P2K9 1392 aa17.66■□□□□ 0.42
RXRA-203ENST00000484822 RBM25P49756 843 aaKnown RBP17.66■□□□□ 0.42
RXRA-203ENST00000484822 INCENPQ9NQS7 918 aa17.66■□□□□ 0.42
RXRA-203ENST00000484822 SMARCA5O60264 1052 aaPredicted RBP17.66■□□□□ 0.42
RXRA-203ENST00000484822 BAG4O95429 457 aaKnown RBP17.66■□□□□ 0.42
RXRA-203ENST00000484822 EIF5P55010 431 aaKnown RBP17.66■□□□□ 0.42
RXRA-203ENST00000484822 NUP133Q8WUM0 1156 aa17.66■□□□□ 0.42
RXRA-203ENST00000484822 ANO10Q9NW15 660 aa17.66■□□□□ 0.42
RXRA-203ENST00000484822 NUTM1Q86Y26 1132 aa17.65■□□□□ 0.42
RXRA-203ENST00000484822 CASQ1P31415 396 aa17.65■□□□□ 0.42
RXRA-203ENST00000484822 TTC21BQ7Z4L5 1316 aa17.65■□□□□ 0.42
RXRA-203ENST00000484822 PRAG1Q86YV5 1406 aa17.65■□□□□ 0.42
RXRA-203ENST00000484822 TXLNBQ8N3L3 684 aa17.65■□□□□ 0.42
RXRA-203ENST00000484822 EMILIN1Q9Y6C2 1016 aa17.65■□□□□ 0.42
RXRA-203ENST00000484822 SAMD9Q5K651 1589 aa17.65■□□□□ 0.42
RXRA-203ENST00000484822 SCAND2PQ9GZW5 306 aaPredicted RBP17.65■□□□□ 0.42
RXRA-203ENST00000484822 MAPKBP1O60336 1514 aa17.64■□□□□ 0.41
RXRA-203ENST00000484822 TARBP1Q13395 1621 aaKnown RBP17.64■□□□□ 0.41
RXRA-203ENST00000484822 KIF5CO60282 957 aa17.64■□□□□ 0.41
RXRA-203ENST00000484822 CCDC158Q5M9N0 1113 aa17.64■□□□□ 0.41
RXRA-203ENST00000484822 TTC39AQ5SRH9 613 aa17.64■□□□□ 0.41
RXRA-203ENST00000484822 WWC2Q6AWC2 1192 aa17.64■□□□□ 0.41
RXRA-203ENST00000484822 ZNF830Q96NB3 372 aaPredicted RBP17.64■□□□□ 0.41
RXRA-203ENST00000484822 ANKRD36BQ8N2N9 1353 aa17.64■□□□□ 0.41
RXRA-203ENST00000484822 LMAN1P49257 510 aa17.64■□□□□ 0.41
RXRA-203ENST00000484822 PRIMPOLQ96LW4 560 aa17.64■□□□□ 0.41
RXRA-203ENST00000484822 TOP1P11387 765 aaKnown RBP17.64■□□□□ 0.41
RXRA-203ENST00000484822 IKQ13123 557 aaPredicted RBP17.63■□□□□ 0.41
RXRA-203ENST00000484822 TICAM2Q86XR7 235 aa17.63■□□□□ 0.41
RXRA-203ENST00000484822 TIGD1Q96MW7 591 aa17.63■□□□□ 0.41
RXRA-203ENST00000484822 CCDC69A6NI79 296 aa17.63■□□□□ 0.41
RXRA-203ENST00000484822 KLHL40Q2TBA0 621 aa17.63■□□□□ 0.41
RXRA-203ENST00000484822 BBXQ8WY36 941 aaPredicted RBP17.63■□□□□ 0.41
RXRA-203ENST00000484822 FAM177BA6PVY3 158 aa17.63■□□□□ 0.41
RXRA-203ENST00000484822 RARSP54136 660 aaKnown RBP17.63■□□□□ 0.41
RXRA-203ENST00000484822 PRPF40BQ6NWY9 871 aaKnown RBP17.63■□□□□ 0.41
RXRA-203ENST00000484822 KRT28Q7Z3Y7 464 aa17.63■□□□□ 0.41
RXRA-203ENST00000484822 DNMT1P26358 1616 aaKnown RBP17.63■□□□□ 0.41
RXRA-203ENST00000484822 RNF187Q5TA31 235 aaPredicted RBP17.63■□□□□ 0.41
RXRA-203ENST00000484822 ACEP12821 1306 aa17.62■□□□□ 0.41
RXRA-203ENST00000484822 PDIA4P13667 645 aaKnown RBP17.62■□□□□ 0.41
RXRA-203ENST00000484822 KRT32Q14532 448 aa17.62■□□□□ 0.41
RXRA-203ENST00000484822 MAP9Q49MG5 647 aa17.62■□□□□ 0.41
RXRA-203ENST00000484822 TAF4BQ92750 862 aa17.62■□□□□ 0.41
RXRA-203ENST00000484822 KLHL10Q6JEL2 608 aa17.62■□□□□ 0.41
RXRA-203ENST00000484822 LARP6Q9BRS8 491 aaKnown RBP17.62■□□□□ 0.41
RXRA-203ENST00000484822 BMS1Q14692 1282 aaKnown RBP17.61■□□□□ 0.41
RXRA-203ENST00000484822 ZSCAN23Q3MJ62 389 aa17.61■□□□□ 0.41
RXRA-203ENST00000484822 SSH1Q8WYL5 1049 aa17.61■□□□□ 0.41
RXRA-203ENST00000484822 SMARCC1Q92922 1105 aaPredicted RBP17.61■□□□□ 0.41
RXRA-203ENST00000484822 RAI14Q9P0K7 980 aa17.61■□□□□ 0.41
RXRA-203ENST00000484822 HCLS1P14317 486 aaPredicted RBP17.6■□□□□ 0.41
RXRA-203ENST00000484822 MX1P20591 662 aa17.6■□□□□ 0.41
RXRA-203ENST00000484822 FKBP4Q02790 459 aaKnown RBP eCLIP17.6■□□□□ 0.412e-6■■■■■ 27.2
RXRA-203ENST00000484822 PUS7Q96PZ0 661 aaKnown RBP17.6■□□□□ 0.41
RXRA-203ENST00000484822 SEPT11Q9NVA2 429 aaKnown RBP17.6■□□□□ 0.41
RXRA-203ENST00000484822 NOL7Q9UMY1 257 aaKnown RBP17.6■□□□□ 0.41
RXRA-203ENST00000484822 TBC1D32Q96NH3 1257 aa17.6■□□□□ 0.41
RXRA-203ENST00000484822 TTC21AQ8NDW8 1320 aa17.6■□□□□ 0.41
RXRA-203ENST00000484822 CDKL5O76039 1030 aa17.6■□□□□ 0.41
RXRA-203ENST00000484822 MYL6BP14649 208 aa17.6■□□□□ 0.41
RXRA-203ENST00000484822 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.6■□□□□ 0.41
RXRA-203ENST00000484822 CCDC113Q9H0I3 377 aa17.6■□□□□ 0.41
RXRA-203ENST00000484822 TAF7Q15545 349 aaPredicted RBP17.59■□□□□ 0.41
RXRA-203ENST00000484822 EIF2AK4Q9P2K8 1649 aaKnown RBP17.59■□□□□ 0.41
RXRA-203ENST00000484822 CPLX3Q8WVH0 158 aa17.59■□□□□ 0.41
RXRA-203ENST00000484822 ADGRL2O95490 1459 aa17.59■□□□□ 0.41
RXRA-203ENST00000484822 KRT222Q8N1A0 295 aa17.59■□□□□ 0.41
RXRA-203ENST00000484822 SSBP05455 408 aaKnown RBP eCLIP17.59■□□□□ 0.41
RXRA-203ENST00000484822 MCM10Q7L590 875 aa17.59■□□□□ 0.41
RXRA-203ENST00000484822 TFIP11Q9UBB9 837 aaKnown RBP17.59■□□□□ 0.41
RXRA-203ENST00000484822 GOLGA6L10A0A0M3HER8 536 aa17.58■□□□□ 0.41
RXRA-203ENST00000484822 ZSWIM4Q9H7M6 989 aa17.58■□□□□ 0.41
RXRA-203ENST00000484822 ZMYM3Q14202 1370 aa17.58■□□□□ 0.41
RXRA-203ENST00000484822 NEMFO60524 1076 aa17.58■□□□□ 0.41
RXRA-203ENST00000484822 GUCY1B3Q02153 619 aa17.58■□□□□ 0.41
RXRA-203ENST00000484822 SNW1Q13573 536 aaKnown RBP17.58■□□□□ 0.41
RXRA-203ENST00000484822 CEP135Q66GS9 1140 aa17.58■□□□□ 0.41
RXRA-203ENST00000484822 THUMPD2Q9BTF0 503 aaKnown RBP17.58■□□□□ 0.41
RXRA-203ENST00000484822 MAP2K1Q02750 393 aaPredicted RBP17.58■□□□□ 0.4
RXRA-203ENST00000484822 DUSP27Q5VZP5 1158 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms