RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 USPL1Q5W0Q7 1092 aa18.02■□□□□ 0.48
ABCF1-206ENST00000479542 KDM2BQ8NHM5 1336 aa18.01■□□□□ 0.47
ABCF1-206ENST00000479542 MTHFSDQ2M296 383 aaKnown RBP18.01■□□□□ 0.47
ABCF1-206ENST00000479542 CCER1Q8TC90 406 aaPredicted RBP18.01■□□□□ 0.47
ABCF1-206ENST00000479542 KCPQ6ZWJ8 1503 aa18.01■□□□□ 0.47
ABCF1-206ENST00000479542 TEX13AQ9BXU3 409 aaPredicted RBP18■□□□□ 0.47
ABCF1-206ENST00000479542 NMRK2Q9NPI5 230 aa18■□□□□ 0.47
ABCF1-206ENST00000479542 PDZRN3Q9UPQ7 1066 aa18■□□□□ 0.47
ABCF1-206ENST00000479542 COL15A1P39059 1388 aa18■□□□□ 0.47
ABCF1-206ENST00000479542 NRXN2Q9P2S2 1712 aa18■□□□□ 0.47
ABCF1-206ENST00000479542 STARD3NLO95772 234 aa17.99■□□□□ 0.47
ABCF1-206ENST00000479542 SLC39A6Q13433 755 aa17.99■□□□□ 0.47
ABCF1-206ENST00000479542 NFIXQ14938 502 aa17.99■□□□□ 0.47
ABCF1-206ENST00000479542 A0A087WZG4 1122 aa17.98■□□□□ 0.47
ABCF1-206ENST00000479542 HMOX1P09601 288 aa17.98■□□□□ 0.47
ABCF1-206ENST00000479542 CHRNA5P30532 468 aa17.98■□□□□ 0.47
ABCF1-206ENST00000479542 EIF5P55010 431 aaKnown RBP17.98■□□□□ 0.47
ABCF1-206ENST00000479542 BCL2L12Q9HB09 334 aa17.98■□□□□ 0.47
ABCF1-206ENST00000479542 ZBTB1Q9Y2K1 713 aa17.98■□□□□ 0.47
ABCF1-206ENST00000479542 SERPINB2P05120 415 aa17.97■□□□□ 0.47
ABCF1-206ENST00000479542 RNF181Q9P0P0 153 aa17.97■□□□□ 0.47
ABCF1-206ENST00000479542 C16orf71Q8IYS4 520 aaPredicted RBP17.96■□□□□ 0.47
ABCF1-206ENST00000479542 GAS2L2Q8NHY3 880 aa17.96■□□□□ 0.47
ABCF1-206ENST00000479542 SBF1O95248 1867 aa17.96■□□□□ 0.47
ABCF1-206ENST00000479542 UBR2Q8IWV8 1755 aa17.96■□□□□ 0.47
ABCF1-206ENST00000479542 TTC5Q8N0Z6 440 aa17.95■□□□□ 0.46
ABCF1-206ENST00000479542 TTLL6Q8N841 843 aa17.95■□□□□ 0.46
ABCF1-206ENST00000479542 VIRMAQ69YN4 1812 aaKnown RBP17.94■□□□□ 0.46
ABCF1-206ENST00000479542 GNAT3A8MTJ3 354 aa17.94■□□□□ 0.46
ABCF1-206ENST00000479542 LMNB1P20700 586 aa17.94■□□□□ 0.46
ABCF1-206ENST00000479542 ZNF790Q6PG37 636 aa17.94■□□□□ 0.46
ABCF1-206ENST00000479542 AFDNP55196 1824 aaKnown RBP17.93■□□□□ 0.46
ABCF1-206ENST00000479542 H0YIN7 160 aa17.93■□□□□ 0.46
ABCF1-206ENST00000479542 IL6STP40189 918 aaPredicted RBP17.93■□□□□ 0.46
ABCF1-206ENST00000479542 IL17REQ8NFR9 667 aa17.93■□□□□ 0.46
ABCF1-206ENST00000479542 COL3A1P02461 1466 aaPredicted RBP17.93■□□□□ 0.46
ABCF1-206ENST00000479542 CEMIPQ8WUJ3 1361 aa17.92■□□□□ 0.46
ABCF1-206ENST00000479542 HEG1Q9ULI3 1381 aa17.92■□□□□ 0.46
ABCF1-206ENST00000479542 GLTPD2A6NH11 291 aa17.92■□□□□ 0.46
ABCF1-206ENST00000479542 TEFQ10587 303 aa17.92■□□□□ 0.46
ABCF1-206ENST00000479542 JMYQ8N9B5 988 aa17.92■□□□□ 0.46
ABCF1-206ENST00000479542 DLEC1Q9Y238 1755 aa17.91■□□□□ 0.46
ABCF1-206ENST00000479542 TNRC6CQ9HCJ0 1690 aaKnown RBP17.91■□□□□ 0.46
ABCF1-206ENST00000479542 CC2D1BQ5T0F9 858 aaKnown RBP17.91■□□□□ 0.46
ABCF1-206ENST00000479542 ZNF496Q96IT1 587 aaPredicted RBP17.91■□□□□ 0.46
ABCF1-206ENST00000479542 BRIP1Q9BX63 1249 aa17.91■□□□□ 0.46
ABCF1-206ENST00000479542 RRAGCQ9HB90 399 aa17.91■□□□□ 0.46
ABCF1-206ENST00000479542 RGL2O15211 777 aa17.9■□□□□ 0.46
ABCF1-206ENST00000479542 VEGFAP15692 232 aaPredicted RBP17.9■□□□□ 0.46
ABCF1-206ENST00000479542 CANXP27824 592 aaKnown RBP17.9■□□□□ 0.46
ABCF1-206ENST00000479542 PDE6BP35913 854 aa17.9■□□□□ 0.46
ABCF1-206ENST00000479542 SMC1BQ8NDV3 1235 aa17.9■□□□□ 0.46
ABCF1-206ENST00000479542 KLRG1Q96E93 195 aa17.9■□□□□ 0.46
ABCF1-206ENST00000479542 C2CD5Q86YS7 1000 aa17.89■□□□□ 0.45
ABCF1-206ENST00000479542 FMNL2Q96PY5 1086 aa17.89■□□□□ 0.45
ABCF1-206ENST00000479542 WDR90Q96KV7 1748 aa17.88■□□□□ 0.45
ABCF1-206ENST00000479542 SIPA1L3O60292 1781 aaPredicted RBP17.87■□□□□ 0.45
ABCF1-206ENST00000479542 PRELPP51888 382 aa17.87■□□□□ 0.45
ABCF1-206ENST00000479542 CLEC4GQ6UXB4 293 aa17.87■□□□□ 0.45
ABCF1-206ENST00000479542 LTBP3Q9NS15 1303 aa17.87■□□□□ 0.45
ABCF1-206ENST00000479542 NFKBIEO00221 500 aa17.86■□□□□ 0.45
ABCF1-206ENST00000479542 U2SURPO15042 1029 aaKnown RBP17.86■□□□□ 0.45
ABCF1-206ENST00000479542 TBC1D9BQ66K14 1250 aa17.86■□□□□ 0.45
ABCF1-206ENST00000479542 DPY19L2Q6NUT2 758 aa17.86■□□□□ 0.45
ABCF1-206ENST00000479542 CARMIL3Q8ND23 1372 aa17.86■□□□□ 0.45
ABCF1-206ENST00000479542 RASSF7Q02833 373 aa17.85■□□□□ 0.45
ABCF1-206ENST00000479542 PRR5LQ6MZQ0 368 aa17.85■□□□□ 0.45
ABCF1-206ENST00000479542 HTATSF1O43719 755 aaKnown RBP17.84■□□□□ 0.45
ABCF1-206ENST00000479542 CAMTA2O94983 1202 aa17.84■□□□□ 0.45
ABCF1-206ENST00000479542 NPM2Q86SE8 214 aaKnown RBP17.84■□□□□ 0.45
ABCF1-206ENST00000479542 CFAP53Q96M91 514 aa17.84■□□□□ 0.45
ABCF1-206ENST00000479542 SETDB2Q96T68 719 aa17.84■□□□□ 0.45
ABCF1-206ENST00000479542 RSPH6AQ9H0K4 717 aa17.84■□□□□ 0.45
ABCF1-206ENST00000479542 NUDCQ9Y266 331 aa17.84■□□□□ 0.45
ABCF1-206ENST00000479542 BTBD11A6QL63 1104 aa17.83■□□□□ 0.44
ABCF1-206ENST00000479542 SOGA3Q5TF21 947 aa17.83■□□□□ 0.44
ABCF1-206ENST00000479542 STYK1Q6J9G0 422 aa17.83■□□□□ 0.44
ABCF1-206ENST00000479542 CNKSR1Q969H4 720 aa17.83■□□□□ 0.44
ABCF1-206ENST00000479542 TBC1D2BQ9UPU7 963 aa17.83■□□□□ 0.44
ABCF1-206ENST00000479542 SCN7AQ01118 1682 aa17.83■□□□□ 0.44
ABCF1-206ENST00000479542 A1BGP04217 495 aa17.82■□□□□ 0.44
ABCF1-206ENST00000479542 BICDL1Q6ZP65 573 aa17.82■□□□□ 0.44
ABCF1-206ENST00000479542 PHACTR3Q96KR7 559 aa17.82■□□□□ 0.44
ABCF1-206ENST00000479542 POTECB2RU33 542 aa17.81■□□□□ 0.44
ABCF1-206ENST00000479542 SRGNP10124 158 aa17.81■□□□□ 0.44
ABCF1-206ENST00000479542 ZNF622Q969S3 477 aaKnown RBP eCLIP17.81■□□□□ 0.44
ABCF1-206ENST00000479542 ANKRD31Q8N7Z5 1873 aa17.81■□□□□ 0.44
ABCF1-206ENST00000479542 FER1L6Q2WGJ9 1857 aa17.8■□□□□ 0.44
ABCF1-206ENST00000479542 KLRG2A4D1S0 409 aaPredicted RBP17.8■□□□□ 0.44
ABCF1-206ENST00000479542 SNRPA1P09661 255 aaKnown RBP17.8■□□□□ 0.44
ABCF1-206ENST00000479542 PRKAR2BP31323 418 aa17.8■□□□□ 0.44
ABCF1-206ENST00000479542 DZIP3Q86Y13 1208 aaKnown RBP17.8■□□□□ 0.44
ABCF1-206ENST00000479542 CNBD1Q8NA66 436 aa17.8■□□□□ 0.44
ABCF1-206ENST00000479542 MASTLQ96GX5 879 aa17.8■□□□□ 0.44
ABCF1-206ENST00000479542 USP16Q9Y5T5 823 aa17.8■□□□□ 0.44
ABCF1-206ENST00000479542 DICER1Q9UPY3 1922 aaKnown RBP17.8■□□□□ 0.44
ABCF1-206ENST00000479542 C21orf2O43822 256 aa17.79■□□□□ 0.44
ABCF1-206ENST00000479542 ST5P78524 1137 aa17.79■□□□□ 0.44
ABCF1-206ENST00000479542 CCDC88AQ3V6T2 1871 aa17.79■□□□□ 0.44
ABCF1-206ENST00000479542 ERFEQ4G0M1 354 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 245.7 ms