RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 ISM2Q6H9L7 571 aa13.51□□□□□ -0.25
GFM1-207ENST00000478254 PLPPR3Q6T4P5 718 aa13.51□□□□□ -0.25
GFM1-207ENST00000478254 SMC2O95347 1197 aa13.51□□□□□ -0.25
GFM1-207ENST00000478254 ERCC6LQ2NKX8 1250 aa13.51□□□□□ -0.25
GFM1-207ENST00000478254 KMT5BQ4FZB7 885 aa13.51□□□□□ -0.25
GFM1-207ENST00000478254 RUFY3Q7L099 469 aa13.51□□□□□ -0.25
GFM1-207ENST00000478254 KIF18AQ8NI77 898 aa13.51□□□□□ -0.25
GFM1-207ENST00000478254 ANKRD7Q92527 254 aa13.51□□□□□ -0.25
GFM1-207ENST00000478254 ATP10AO60312 1499 aa13.5□□□□□ -0.25
GFM1-207ENST00000478254 ERCC6Q03468 1493 aa13.5□□□□□ -0.25
GFM1-207ENST00000478254 TARBP1Q13395 1621 aaKnown RBP13.5□□□□□ -0.25
GFM1-207ENST00000478254 TERF2Q15554 542 aa13.5□□□□□ -0.25
GFM1-207ENST00000478254 SLFN14P0C7P3 912 aa13.49□□□□□ -0.25
GFM1-207ENST00000478254 FBXO38Q6PIJ6 1188 aa13.49□□□□□ -0.25
GFM1-207ENST00000478254 TTC6Q86TZ1 520 aa13.49□□□□□ -0.25
GFM1-207ENST00000478254 COG3Q96JB2 828 aa13.49□□□□□ -0.25
GFM1-207ENST00000478254 SNX14Q9Y5W7 946 aa13.49□□□□□ -0.25
GFM1-207ENST00000478254 CCDC144BQ3MJ40 725 aa13.49□□□□□ -0.25
GFM1-207ENST00000478254 CDC37L1Q7L3B6 337 aa13.49□□□□□ -0.25
GFM1-207ENST00000478254 CCDC144CPQ8IYA2 1237 aa13.49□□□□□ -0.25
GFM1-207ENST00000478254 DDX41Q9UJV9 622 aaKnown RBP13.49□□□□□ -0.25
GFM1-207ENST00000478254 UBTFL1P0CB47 393 aaPredicted RBP13.49□□□□□ -0.25
GFM1-207ENST00000478254 GUCY1B3Q02153 619 aa13.49□□□□□ -0.25
GFM1-207ENST00000478254 C10orf67Q8IYJ2 551 aa13.49□□□□□ -0.25
GFM1-207ENST00000478254 CYP46A1Q9Y6A2 500 aa13.49□□□□□ -0.25
GFM1-207ENST00000478254 PTPN21Q16825 1174 aa13.48□□□□□ -0.25
GFM1-207ENST00000478254 CCDC34Q96HJ3 373 aa13.48□□□□□ -0.25
GFM1-207ENST00000478254 MRVI1Q9Y6F6 885 aa13.48□□□□□ -0.25
GFM1-207ENST00000478254 RTL1A6NKG5 1358 aa13.48□□□□□ -0.25
GFM1-207ENST00000478254 HTATSF1O43719 755 aaKnown RBP13.48□□□□□ -0.25
GFM1-207ENST00000478254 ZNF75DP51815 510 aa13.48□□□□□ -0.25
GFM1-207ENST00000478254 ADCK5Q3MIX3 580 aa13.48□□□□□ -0.25
GFM1-207ENST00000478254 SYT10Q6XYQ8 523 aa13.48□□□□□ -0.25
GFM1-207ENST00000478254 ZNF397Q8NF99 534 aaPredicted RBP13.48□□□□□ -0.25
GFM1-207ENST00000478254 CALCOCO1Q9P1Z2 691 aa13.48□□□□□ -0.25
GFM1-207ENST00000478254 BIN1O00499 593 aa13.48□□□□□ -0.25
GFM1-207ENST00000478254 SRGAP3O43295 1099 aa13.48□□□□□ -0.25
GFM1-207ENST00000478254 MNS1Q8NEH6 495 aa13.48□□□□□ -0.25
GFM1-207ENST00000478254 ZSWIM4Q9H7M6 989 aa13.48□□□□□ -0.25
GFM1-207ENST00000478254 ZKSCAN1P17029 563 aaPredicted RBP13.47□□□□□ -0.25
GFM1-207ENST00000478254 GABPB1Q06547 395 aaPredicted RBP13.47□□□□□ -0.25
GFM1-207ENST00000478254 PAXBP1Q9Y5B6 917 aa13.47□□□□□ -0.25
GFM1-207ENST00000478254 CCDC69A6NI79 296 aa13.47□□□□□ -0.25
GFM1-207ENST00000478254 RAB11FIP3O75154 756 aa13.47□□□□□ -0.25
GFM1-207ENST00000478254 LRRC2Q9BYS8 371 aa13.47□□□□□ -0.25
GFM1-207ENST00000478254 MADDQ8WXG6 1647 aa13.47□□□□□ -0.25
GFM1-207ENST00000478254 CFAP74Q9C0B2 1584 aa13.47□□□□□ -0.25
GFM1-207ENST00000478254 NR1I2O75469 434 aa13.47□□□□□ -0.25
GFM1-207ENST00000478254 MTMR6Q9Y217 621 aa13.47□□□□□ -0.25
GFM1-207ENST00000478254 MAST1Q9Y2H9 1570 aa13.46□□□□□ -0.25
GFM1-207ENST00000478254 CHMP4CQ96CF2 233 aa13.46□□□□□ -0.25
GFM1-207ENST00000478254 ANXA1P04083 346 aa13.46□□□□□ -0.26
GFM1-207ENST00000478254 GYS2P54840 703 aa13.46□□□□□ -0.26
GFM1-207ENST00000478254 HNRNPH2P55795 449 aaKnown RBP13.46□□□□□ -0.26
GFM1-207ENST00000478254 ARHGAP29Q52LW3 1261 aa13.46□□□□□ -0.26
GFM1-207ENST00000478254 HSP90AA4PQ58FG1 418 aa13.46□□□□□ -0.26
GFM1-207ENST00000478254 C14orf37Q86TY3 774 aa13.46□□□□□ -0.26
GFM1-207ENST00000478254 CNTROBQ8N137 903 aa13.46□□□□□ -0.26
GFM1-207ENST00000478254 SIL1Q9H173 461 aa13.46□□□□□ -0.26
GFM1-207ENST00000478254 EPC1Q9H2F5 836 aa13.46□□□□□ -0.26
GFM1-207ENST00000478254 ZCCHC17Q9NP64 241 aaKnown RBP13.46□□□□□ -0.26
GFM1-207ENST00000478254 DUOX2Q9NRD8 1548 aa13.46□□□□□ -0.26
GFM1-207ENST00000478254 URI1O94763 535 aaPredicted RBP13.45□□□□□ -0.26
GFM1-207ENST00000478254 HAP1P54257 671 aaPredicted RBP13.45□□□□□ -0.26
GFM1-207ENST00000478254 SDF4Q9BRK5 362 aa13.45□□□□□ -0.26
GFM1-207ENST00000478254 TOMM22Q9NS69 142 aa13.45□□□□□ -0.26
GFM1-207ENST00000478254 STK11IPQ8N1F8 1099 aa13.45□□□□□ -0.26
GFM1-207ENST00000478254 IPO4Q8TEX9 1081 aaKnown RBP13.45□□□□□ -0.26
GFM1-207ENST00000478254 TEX35Q5T0J7 233 aa13.44□□□□□ -0.26
GFM1-207ENST00000478254 CTIFO43310 598 aaKnown RBP13.44□□□□□ -0.26
GFM1-207ENST00000478254 SEC31AO94979 1220 aaKnown RBP13.44□□□□□ -0.26
GFM1-207ENST00000478254 ANAPC15P60006 121 aa13.44□□□□□ -0.26
GFM1-207ENST00000478254 ME3Q16798 604 aa13.44□□□□□ -0.26
GFM1-207ENST00000478254 LARP1Q6PKG0 1096 aaKnown RBP13.44□□□□□ -0.26
GFM1-207ENST00000478254 SLU7O95391 586 aaKnown RBP13.44□□□□□ -0.26
GFM1-207ENST00000478254 PTH1RQ03431 593 aa13.44□□□□□ -0.26
GFM1-207ENST00000478254 SNW1Q13573 536 aaKnown RBP13.44□□□□□ -0.26
GFM1-207ENST00000478254 PPP1R42Q7Z4L9 355 aa13.44□□□□□ -0.26
GFM1-207ENST00000478254 UBXN4Q92575 508 aa13.44□□□□□ -0.26
GFM1-207ENST00000478254 DNAJC2Q99543 621 aaKnown RBP13.44□□□□□ -0.26
GFM1-207ENST00000478254 DNAI1Q9UI46 699 aa13.44□□□□□ -0.26
GFM1-207ENST00000478254 RPAP1Q9BWH6 1393 aaPredicted RBP13.44□□□□□ -0.26
GFM1-207ENST00000478254 MRC2Q9UBG0 1479 aa13.43□□□□□ -0.26
GFM1-207ENST00000478254 CCT4P50991 539 aaKnown RBP13.43□□□□□ -0.26
GFM1-207ENST00000478254 RAD50Q92878 1312 aa13.43□□□□□ -0.26
GFM1-207ENST00000478254 GNAI3P08754 354 aa13.43□□□□□ -0.26
GFM1-207ENST00000478254 HSPA4P34932 840 aa13.43□□□□□ -0.26
GFM1-207ENST00000478254 KRBA2Q6ZNG9 492 aa13.43□□□□□ -0.26
GFM1-207ENST00000478254 TMC6Q7Z403 805 aa13.43□□□□□ -0.26
GFM1-207ENST00000478254 FTOQ9C0B1 505 aaKnown RBP eCLIP13.43□□□□□ -0.26
GFM1-207ENST00000478254 TTC37Q6PGP7 1564 aa13.43□□□□□ -0.26
GFM1-207ENST00000478254 IFIT2P09913 472 aaKnown RBP13.43□□□□□ -0.26
GFM1-207ENST00000478254 AOPEPQ8N6M6 819 aa13.43□□□□□ -0.26
GFM1-207ENST00000478254 TCHHQ07283 1943 aa13.42□□□□□ -0.26
GFM1-207ENST00000478254 ME1P48163 572 aa13.42□□□□□ -0.26
GFM1-207ENST00000478254 MLECQ14165 292 aa13.42□□□□□ -0.26
GFM1-207ENST00000478254 SF3A1Q15459 793 aaKnown RBP13.42□□□□□ -0.26
GFM1-207ENST00000478254 NUTM2GQ5VZR2 741 aa13.42□□□□□ -0.26
GFM1-207ENST00000478254 TMCO3Q6UWJ1 677 aa13.42□□□□□ -0.26
GFM1-207ENST00000478254 MYOM1P52179 1685 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms