RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 LZTS3O60299 673 aaPredicted RBP9.03□□□□□ -0.96
UBR3-209ENST00000477461 ATXN7L1Q9ULK2 861 aaPredicted RBP9.03□□□□□ -0.96
UBR3-209ENST00000477461 PCDHGC4Q9Y5F7 938 aa9.03□□□□□ -0.96
UBR3-209ENST00000477461 DCDC2BA2VCK2 349 aa9.02□□□□□ -0.97
UBR3-209ENST00000477461 SHISA8B8ZZ34 492 aa9.02□□□□□ -0.97
UBR3-209ENST00000477461 TMEM132AQ24JP5 1023 aa9.02□□□□□ -0.97
UBR3-209ENST00000477461 NBPF1Q3BBV0 1214 aa9.02□□□□□ -0.97
UBR3-209ENST00000477461 BICDL1Q6ZP65 573 aa9.02□□□□□ -0.97
UBR3-209ENST00000477461 ZNF295-AS1Q8N0V1 137 aa9.02□□□□□ -0.97
UBR3-209ENST00000477461 BEND7Q8N7W2 519 aaPredicted RBP9.02□□□□□ -0.97
UBR3-209ENST00000477461 TPCN2Q8NHX9 752 aa9.02□□□□□ -0.97
UBR3-209ENST00000477461 UCN2Q96RP3 112 aa9.02□□□□□ -0.97
UBR3-209ENST00000477461 NDFIP2Q9NV92 336 aa9.02□□□□□ -0.97
UBR3-209ENST00000477461 DNAAF2Q9NVR5 837 aaKnown RBP9.02□□□□□ -0.97
UBR3-209ENST00000477461 KIAA1024Q9UPX6 916 aa9.02□□□□□ -0.97
UBR3-209ENST00000477461 GJA3Q9Y6H8 435 aa9.02□□□□□ -0.97
UBR3-209ENST00000477461 DNMT3AQ9Y6K1 912 aaPredicted RBP9.02□□□□□ -0.97
UBR3-209ENST00000477461 USP17L3A6NCW0 530 aa9.01□□□□□ -0.97
UBR3-209ENST00000477461 USP17L4A6NCW7 530 aa9.01□□□□□ -0.97
UBR3-209ENST00000477461 ZBTB7BO15156 539 aaPredicted RBP9.01□□□□□ -0.97
UBR3-209ENST00000477461 ATXN7O15265 892 aaPredicted RBP9.01□□□□□ -0.97
UBR3-209ENST00000477461 TATP17735 454 aaPredicted RBP9.01□□□□□ -0.97
UBR3-209ENST00000477461 TXLNAP40222 546 aa9.01□□□□□ -0.97
UBR3-209ENST00000477461 USP17L2Q6R6M4 530 aa9.01□□□□□ -0.97
UBR3-209ENST00000477461 USP17L1Q7RTZ2 530 aa9.01□□□□□ -0.97
UBR3-209ENST00000477461 C1orf216Q8TAB5 229 aa9.01□□□□□ -0.97
UBR3-209ENST00000477461 ZIC5Q96T25 663 aa9.01□□□□□ -0.97
UBR3-209ENST00000477461 RRAGCQ9HB90 399 aa9.01□□□□□ -0.97
UBR3-209ENST00000477461 SCHIP1Q9P0W5 487 aaPredicted RBP9.01□□□□□ -0.97
UBR3-209ENST00000477461 KHNYNO15037 678 aaKnown RBP9□□□□□ -0.97
UBR3-209ENST00000477461 SNRPNP63162 240 aaKnown RBP9□□□□□ -0.97
UBR3-209ENST00000477461 CLDN10P78369 228 aa9□□□□□ -0.97
UBR3-209ENST00000477461 CCDC102BQ68D86 513 aa9□□□□□ -0.97
UBR3-209ENST00000477461 GPAT2Q6NUI2 795 aa9□□□□□ -0.97
UBR3-209ENST00000477461 KANK3Q6NY19 840 aa9□□□□□ -0.97
UBR3-209ENST00000477461 FIGNL1Q6PIW4 674 aa9□□□□□ -0.97
UBR3-209ENST00000477461 PODNQ7Z5L7 613 aa9□□□□□ -0.97
UBR3-209ENST00000477461 ZDHHC1Q8WTX9 485 aa9□□□□□ -0.97
UBR3-209ENST00000477461 EDARADDQ8WWZ3 215 aa9□□□□□ -0.97
UBR3-209ENST00000477461 L3MBTL2Q969R5 705 aa9□□□□□ -0.97
UBR3-209ENST00000477461 MKRN1Q9UHC7 482 aaKnown RBP9□□□□□ -0.97
UBR3-209ENST00000477461 HCN2Q9UL51 889 aa9□□□□□ -0.97
UBR3-209ENST00000477461 ZNF232Q9UNY5 417 aa9□□□□□ -0.97
UBR3-209ENST00000477461 ATP9BO43861 1147 aa8.99□□□□□ -0.97
UBR3-209ENST00000477461 NLRP8Q86W28 1048 aa8.99□□□□□ -0.97
UBR3-209ENST00000477461 TRIM50Q86XT4 487 aa8.99□□□□□ -0.97
UBR3-209ENST00000477461 SLC9A9Q8IVB4 645 aa8.99□□□□□ -0.97
UBR3-209ENST00000477461 GGA1Q9UJY5 639 aa8.99□□□□□ -0.97
UBR3-209ENST00000477461 PHF20L1A8MW92 1017 aa8.98□□□□□ -0.97
UBR3-209ENST00000477461 MAPTP10636 758 aaKnown RBP8.98□□□□□ -0.97
UBR3-209ENST00000477461 CD33P20138 364 aa8.98□□□□□ -0.97
UBR3-209ENST00000477461 NOS2P35228 1153 aa8.98□□□□□ -0.97
UBR3-209ENST00000477461 SH3PXD2AQ5TCZ1 1133 aa8.98□□□□□ -0.97
UBR3-209ENST00000477461 NEURL1BA8MQ27 555 aa8.97□□□□□ -0.97
UBR3-209ENST00000477461 AMPD1P23109 780 aa8.97□□□□□ -0.97
UBR3-209ENST00000477461 TNP2Q05952 138 aa8.97□□□□□ -0.97
UBR3-209ENST00000477461 OGFOD1Q8N543 542 aa8.97□□□□□ -0.97
UBR3-209ENST00000477461 ZNF594Q96JF6 807 aaPredicted RBP8.97□□□□□ -0.97
UBR3-209ENST00000477461 TFIP11Q9UBB9 837 aaKnown RBP8.97□□□□□ -0.97
UBR3-209ENST00000477461 GDF2Q9UK05 429 aaPredicted RBP8.97□□□□□ -0.97
UBR3-209ENST00000477461 SFI1A8K8P3 1242 aa8.96□□□□□ -0.98
UBR3-209ENST00000477461 EPHA4P54764 986 aa8.96□□□□□ -0.98
UBR3-209ENST00000477461 FOXK2Q01167 660 aa8.96□□□□□ -0.98
UBR3-209ENST00000477461 LRRC69Q6ZNQ3 347 aa8.96□□□□□ -0.98
UBR3-209ENST00000477461 PROSER2Q86WR7 435 aaPredicted RBP8.96□□□□□ -0.98
UBR3-209ENST00000477461 PLEKHM2Q8IWE5 1019 aa8.96□□□□□ -0.98
UBR3-209ENST00000477461 GOLGA6L1Q8N7Z2 621 aa8.96□□□□□ -0.98
UBR3-209ENST00000477461 GLMNQ92990 594 aa8.96□□□□□ -0.98
UBR3-209ENST00000477461 ZDHHC3Q9NYG2 299 aa8.96□□□□□ -0.98
UBR3-209ENST00000477461 HCN4Q9Y3Q4 1203 aa8.96□□□□□ -0.98
UBR3-209ENST00000477461 ATP1A2P50993 1020 aa8.95□□□□□ -0.98
UBR3-209ENST00000477461 TEAD4Q15561 434 aa8.95□□□□□ -0.98
UBR3-209ENST00000477461 FNBP4Q8N3X1 1017 aaPredicted RBP8.95□□□□□ -0.98
UBR3-209ENST00000477461 DCAF5Q96JK2 942 aa8.95□□□□□ -0.98
UBR3-209ENST00000477461 TSPAN10Q9H1Z9 355 aaPredicted RBP8.95□□□□□ -0.98
UBR3-209ENST00000477461 NEUROD4Q9HD90 331 aa8.95□□□□□ -0.98
UBR3-209ENST00000477461 LRRC4BQ9NT99 713 aa8.95□□□□□ -0.98
UBR3-209ENST00000477461 SERTM1A2A2V5 107 aa8.94□□□□□ -0.98
UBR3-209ENST00000477461 LGR5O75473 907 aa8.94□□□□□ -0.98
UBR3-209ENST00000477461 TSEN2Q8NCE0 465 aaKnown RBP8.94□□□□□ -0.98
UBR3-209ENST00000477461 STRN4Q9NRL3 753 aa8.94□□□□□ -0.98
UBR3-209ENST00000477461 RASA1P20936 1047 aa8.93□□□□□ -0.98
UBR3-209ENST00000477461 PCBP4P57723 403 aaKnown RBP8.93□□□□□ -0.98
UBR3-209ENST00000477461 BTBD6Q96KE9 485 aa8.93□□□□□ -0.98
UBR3-209ENST00000477461 KLF15Q9UIH9 416 aa8.93□□□□□ -0.98
UBR3-209ENST00000477461 PRR12Q9ULL5 1215 aa8.93□□□□□ -0.98
UBR3-209ENST00000477461 PALM3A6NDB9 673 aaPredicted RBP8.92□□□□□ -0.98
UBR3-209ENST00000477461 GRIN2CQ14957 1233 aa8.92□□□□□ -0.98
UBR3-209ENST00000477461 LARGE2Q8N3Y3 721 aa8.92□□□□□ -0.98
UBR3-209ENST00000477461 CALR3Q96L12 384 aaKnown RBP8.92□□□□□ -0.98
UBR3-209ENST00000477461 MARK1Q9P0L2 795 aa8.92□□□□□ -0.98
UBR3-209ENST00000477461 RBM19Q9Y4C8 960 aaKnown RBP8.92□□□□□ -0.98
UBR3-209ENST00000477461 ARAFP10398 606 aa8.91□□□□□ -0.98
UBR3-209ENST00000477461 EPXP11678 715 aa8.91□□□□□ -0.98
UBR3-209ENST00000477461 SLCO4C1Q6ZQN7 724 aa8.91□□□□□ -0.98
UBR3-209ENST00000477461 MKL2Q9ULH7 1088 aa8.91□□□□□ -0.98
UBR3-209ENST00000477461 EML1O00423 815 aa8.9□□□□□ -0.98
UBR3-209ENST00000477461 PLA2G4EQ3MJ16 856 aa8.9□□□□□ -0.98
UBR3-209ENST00000477461 GAS2L2Q8NHY3 880 aa8.9□□□□□ -0.98
UBR3-209ENST00000477461 RHPN1Q8TCX5 695 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms