RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 MEN1O00255 615 aa10.28□□□□□ -0.76
VPS50-212ENST00000476413 TNFRSF10BO14763 440 aa10.28□□□□□ -0.76
VPS50-212ENST00000476413 HIRAP54198 1017 aaPredicted RBP10.28□□□□□ -0.76
VPS50-212ENST00000476413 TEAD4Q15561 434 aa10.28□□□□□ -0.76
VPS50-212ENST00000476413 COX20Q5RI15 118 aa10.28□□□□□ -0.76
VPS50-212ENST00000476413 C16orf46Q6P387 395 aa10.28□□□□□ -0.76
VPS50-212ENST00000476413 PPARGC1BQ86YN6 1023 aaKnown RBP10.28□□□□□ -0.76
VPS50-212ENST00000476413 LRFN2Q9ULH4 789 aa10.27□□□□□ -0.77
VPS50-212ENST00000476413 NBPF15Q8N660 670 aa10.26□□□□□ -0.77
VPS50-212ENST00000476413 VTI1AQ96AJ9 217 aa10.26□□□□□ -0.77
VPS50-212ENST00000476413 MYO19Q96H55 970 aa10.26□□□□□ -0.77
VPS50-212ENST00000476413 MPSTP25325 297 aa10.25□□□□□ -0.77
VPS50-212ENST00000476413 NOS2P35228 1153 aa10.25□□□□□ -0.77
VPS50-212ENST00000476413 FAM26DQ5JW98 314 aa10.25□□□□□ -0.77
VPS50-212ENST00000476413 NLRP3Q96P20 1036 aa10.25□□□□□ -0.77
VPS50-212ENST00000476413 GRIP2Q9C0E4 1043 aa10.25□□□□□ -0.77
VPS50-212ENST00000476413 SERTM1A2A2V5 107 aa10.24□□□□□ -0.77
VPS50-212ENST00000476413 ERCC3P19447 782 aa10.24□□□□□ -0.77
VPS50-212ENST00000476413 NPAS4Q8IUM7 802 aa10.24□□□□□ -0.77
VPS50-212ENST00000476413 L3MBTL2Q969R5 705 aa10.24□□□□□ -0.77
VPS50-212ENST00000476413 ZSCAN10Q96SZ4 725 aaPredicted RBP10.24□□□□□ -0.77
VPS50-212ENST00000476413 PARP3Q9Y6F1 533 aa10.24□□□□□ -0.77
VPS50-212ENST00000476413 SPINT1O43278 529 aa10.23□□□□□ -0.77
VPS50-212ENST00000476413 RBM25P49756 843 aaKnown RBP10.23□□□□□ -0.77
VPS50-212ENST00000476413 INSM2Q96T92 566 aaPredicted RBP10.23□□□□□ -0.77
VPS50-212ENST00000476413 CABP1Q9NZU7 370 aa10.23□□□□□ -0.77
VPS50-212ENST00000476413 ANKRD33BA6NCL7 494 aa10.22□□□□□ -0.77
VPS50-212ENST00000476413 FAM13AO94988 1023 aa10.22□□□□□ -0.77
VPS50-212ENST00000476413 GPC1P35052 558 aa10.22□□□□□ -0.77
VPS50-212ENST00000476413 RANGAP1P46060 587 aaPredicted RBP10.22□□□□□ -0.77
VPS50-212ENST00000476413 RNF144AP50876 292 aaPredicted RBP10.22□□□□□ -0.77
VPS50-212ENST00000476413 ALDH16A1Q8IZ83 802 aa10.22□□□□□ -0.77
VPS50-212ENST00000476413 RHBDD1Q8TEB9 315 aa10.22□□□□□ -0.77
VPS50-212ENST00000476413 TSEN34Q9BSV6 310 aaKnown RBP10.22□□□□□ -0.77
VPS50-212ENST00000476413 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.22□□□□□ -0.77
VPS50-212ENST00000476413 DCTN4Q9UJW0 460 aa10.22□□□□□ -0.77
VPS50-212ENST00000476413 RBM47A0AV96 593 aaKnown RBP10.21□□□□□ -0.77
VPS50-212ENST00000476413 CAPN5O15484 640 aaPredicted RBP10.21□□□□□ -0.77
VPS50-212ENST00000476413 LINC00528Q8N1L1 170 aa10.21□□□□□ -0.77
VPS50-212ENST00000476413 STIM2Q9P246 746 aa10.21□□□□□ -0.77
VPS50-212ENST00000476413 HCN4Q9Y3Q4 1203 aa10.21□□□□□ -0.77
VPS50-212ENST00000476413 MAPK1P28482 360 aa10.2□□□□□ -0.78
VPS50-212ENST00000476413 CTSOP43234 321 aaPredicted RBP10.2□□□□□ -0.78
VPS50-212ENST00000476413 NGLY1Q96IV0 654 aa10.2□□□□□ -0.78
VPS50-212ENST00000476413 ASB16Q96NS5 453 aa10.2□□□□□ -0.78
VPS50-212ENST00000476413 NIFKQ9BYG3 293 aaKnown RBP10.2□□□□□ -0.78
VPS50-212ENST00000476413 ZNF232Q9UNY5 417 aa10.2□□□□□ -0.78
VPS50-212ENST00000476413 CHMP3Q9Y3E7 222 aa10.2□□□□□ -0.78
VPS50-212ENST00000476413 UNCXA6NJT0 531 aa10.19□□□□□ -0.78
VPS50-212ENST00000476413 ZBTB39O15060 712 aa10.19□□□□□ -0.78
VPS50-212ENST00000476413 TXLNAP40222 546 aa10.19□□□□□ -0.78
VPS50-212ENST00000476413 EIF1AXP47813 144 aaKnown RBP10.19□□□□□ -0.78
VPS50-212ENST00000476413 RTN1Q16799 776 aa10.19□□□□□ -0.78
VPS50-212ENST00000476413 C4orf17Q53FE4 359 aa10.19□□□□□ -0.78
VPS50-212ENST00000476413 TMEM214Q6NUQ4 689 aaKnown RBP10.19□□□□□ -0.78
VPS50-212ENST00000476413 C7orf43Q8WVR3 580 aa10.19□□□□□ -0.78
VPS50-212ENST00000476413 PHACTR1Q9C0D0 580 aa10.19□□□□□ -0.78
VPS50-212ENST00000476413 FZD6O60353 706 aa10.18□□□□□ -0.78
VPS50-212ENST00000476413 SPATA31C2B4DYI2 1134 aa10.17□□□□□ -0.78
VPS50-212ENST00000476413 C1orf53Q5VUE5 145 aa10.17□□□□□ -0.78
VPS50-212ENST00000476413 ETFBKMTQ8IXQ9 262 aa10.17□□□□□ -0.78
VPS50-212ENST00000476413 RGL4Q8IZJ4 473 aa10.17□□□□□ -0.78
VPS50-212ENST00000476413 KLRG1Q96E93 195 aa10.17□□□□□ -0.78
VPS50-212ENST00000476413 RBCK1Q9BYM8 510 aa10.17□□□□□ -0.78
VPS50-212ENST00000476413 AVPP01185 164 aa10.16□□□□□ -0.78
VPS50-212ENST00000476413 IGHA2P01877 340 aa10.16□□□□□ -0.78
VPS50-212ENST00000476413 DGKZQ13574 1117 aa10.16□□□□□ -0.78
VPS50-212ENST00000476413 SLC27A3Q5K4L6 730 aa10.16□□□□□ -0.78
VPS50-212ENST00000476413 RNF217Q8TC41 542 aa10.16□□□□□ -0.78
VPS50-212ENST00000476413 CCDC87Q9NVE4 849 aa10.16□□□□□ -0.78
VPS50-212ENST00000476413 KLK14Q9P0G3 267 aa10.16□□□□□ -0.78
VPS50-212ENST00000476413 PDZRN3Q9UPQ7 1066 aa10.16□□□□□ -0.78
VPS50-212ENST00000476413 PLA2G4AP47712 749 aa10.15□□□□□ -0.78
VPS50-212ENST00000476413 C11orf91Q3C1V1 193 aa10.15□□□□□ -0.78
VPS50-212ENST00000476413 TMC7Q7Z402 723 aa10.15□□□□□ -0.78
VPS50-212ENST00000476413 FBXO33Q7Z6M2 555 aa10.15□□□□□ -0.78
VPS50-212ENST00000476413 POLMQ9NP87 494 aaPredicted RBP10.15□□□□□ -0.78
VPS50-212ENST00000476413 BCS1LQ9Y276 419 aa10.15□□□□□ -0.78
VPS50-212ENST00000476413 RGS20O76081 388 aa10.14□□□□□ -0.79
VPS50-212ENST00000476413 ZNF16P17020 682 aaPredicted RBP10.14□□□□□ -0.79
VPS50-212ENST00000476413 BRD2P25440 801 aaKnown RBP10.14□□□□□ -0.79
VPS50-212ENST00000476413 GNASQ5JWF2 1037 aa10.14□□□□□ -0.79
VPS50-212ENST00000476413 MRPL14Q6P1L8 145 aaKnown RBP10.14□□□□□ -0.79
VPS50-212ENST00000476413 ATCAYQ86WG3 371 aa10.14□□□□□ -0.79
VPS50-212ENST00000476413 ALKBH2Q6NS38 261 aa10.13□□□□□ -0.79
VPS50-212ENST00000476413 ABTB2Q8N961 1025 aa10.13□□□□□ -0.79
VPS50-212ENST00000476413 BCL2L13Q9BXK5 485 aa10.13□□□□□ -0.79
VPS50-212ENST00000476413 BMP2P12643 396 aa10.12□□□□□ -0.79
VPS50-212ENST00000476413 GTF2E1P29083 439 aaPredicted RBP10.12□□□□□ -0.79
VPS50-212ENST00000476413 TAGLNQ01995 201 aaKnown RBP10.12□□□□□ -0.79
VPS50-212ENST00000476413 C6orf118Q5T5N4 469 aa10.12□□□□□ -0.79
VPS50-212ENST00000476413 ZSCAN29Q8IWY8 852 aaPredicted RBP10.12□□□□□ -0.79
VPS50-212ENST00000476413 ZDHHC3Q9NYG2 299 aa10.12□□□□□ -0.79
VPS50-212ENST00000476413 FAM187AA6NFU0 413 aa10.11□□□□□ -0.79
VPS50-212ENST00000476413 NDUFB5O43674 189 aa10.11□□□□□ -0.79
VPS50-212ENST00000476413 UPP2O95045 317 aa10.11□□□□□ -0.79
VPS50-212ENST00000476413 BMP1P13497 986 aa10.11□□□□□ -0.79
VPS50-212ENST00000476413 ATP4AP20648 1035 aa10.11□□□□□ -0.79
VPS50-212ENST00000476413 PHKA2P46019 1235 aa10.11□□□□□ -0.79
VPS50-212ENST00000476413 POU4F2Q12837 409 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms