RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 PPP1R15AO75807 674 aaPredicted RBP13.37□□□□□ -0.27
SGCE-210ENST00000472326 ITGA6P23229 1130 aa13.37□□□□□ -0.27
SGCE-210ENST00000472326 SH3PXD2AQ5TCZ1 1133 aa13.37□□□□□ -0.27
SGCE-210ENST00000472326 SCG3Q8WXD2 468 aaKnown RBP13.37□□□□□ -0.27
SGCE-210ENST00000472326 CHMP7Q8WUX9 453 aaPredicted RBP13.36□□□□□ -0.27
SGCE-210ENST00000472326 A0A1B0GTH6 734 aa13.35□□□□□ -0.27
SGCE-210ENST00000472326 PPP1R12BO60237 982 aaPredicted RBP13.35□□□□□ -0.27
SGCE-210ENST00000472326 MSX1P28360 303 aa13.35□□□□□ -0.27
SGCE-210ENST00000472326 NPAS3Q8IXF0 933 aa13.35□□□□□ -0.27
SGCE-210ENST00000472326 L3MBTL2Q969R5 705 aa13.35□□□□□ -0.27
SGCE-210ENST00000472326 ZNF232Q9UNY5 417 aa13.35□□□□□ -0.27
SGCE-210ENST00000472326 ATAD2Q6PL18 1390 aa13.34□□□□□ -0.27
SGCE-210ENST00000472326 CDC14CA4D256 554 aa13.34□□□□□ -0.27
SGCE-210ENST00000472326 NOS2P35228 1153 aa13.34□□□□□ -0.27
SGCE-210ENST00000472326 FAM69CQ0P6D2 419 aa13.34□□□□□ -0.27
SGCE-210ENST00000472326 TEAD4Q15561 434 aa13.34□□□□□ -0.27
SGCE-210ENST00000472326 LCE2CQ5TA81 110 aa13.34□□□□□ -0.27
SGCE-210ENST00000472326 ERBB4Q15303 1308 aa13.34□□□□□ -0.27
SGCE-210ENST00000472326 ACIN1Q9UKV3 1341 aaKnown RBP13.34□□□□□ -0.27
SGCE-210ENST00000472326 WFS1O76024 890 aa13.33□□□□□ -0.28
SGCE-210ENST00000472326 F11P03951 625 aa13.33□□□□□ -0.28
SGCE-210ENST00000472326 TXLNAP40222 546 aa13.33□□□□□ -0.28
SGCE-210ENST00000472326 PSMA6P60900 246 aaKnown RBP13.33□□□□□ -0.28
SGCE-210ENST00000472326 SLC16A10Q8TF71 515 aa13.33□□□□□ -0.28
SGCE-210ENST00000472326 RUBCNLQ9H714 662 aa13.33□□□□□ -0.28
SGCE-210ENST00000472326 SERTM1A2A2V5 107 aa13.32□□□□□ -0.28
SGCE-210ENST00000472326 VWA5B2Q8N398 1253 aa13.32□□□□□ -0.28
SGCE-210ENST00000472326 PRIMPOLQ96LW4 560 aa13.32□□□□□ -0.28
SGCE-210ENST00000472326 EML1O00423 815 aa13.31□□□□□ -0.28
SGCE-210ENST00000472326 PRMT3O60678 531 aa13.31□□□□□ -0.28
SGCE-210ENST00000472326 ATP4AP20648 1035 aa13.31□□□□□ -0.28
SGCE-210ENST00000472326 DBN1Q16643 649 aa13.31□□□□□ -0.28
SGCE-210ENST00000472326 CARNS1A5YM72 827 aa13.3□□□□□ -0.28
SGCE-210ENST00000472326 SWI5Q1ZZU3 235 aa13.3□□□□□ -0.28
SGCE-210ENST00000472326 NBPF1Q3BBV0 1214 aa13.3□□□□□ -0.28
SGCE-210ENST00000472326 TREML4Q6UXN2 200 aa13.3□□□□□ -0.28
SGCE-210ENST00000472326 HCN4Q9Y3Q4 1203 aa13.3□□□□□ -0.28
SGCE-210ENST00000472326 THBS1P07996 1170 aa13.28□□□□□ -0.28
SGCE-210ENST00000472326 IGFBP4P22692 258 aa13.28□□□□□ -0.28
SGCE-210ENST00000472326 WEE1P30291 646 aa13.28□□□□□ -0.28
SGCE-210ENST00000472326 TRIM22Q8IYM9 498 aa13.28□□□□□ -0.28
SGCE-210ENST00000472326 GPR161Q8N6U8 529 aaKnown RBP13.28□□□□□ -0.28
SGCE-210ENST00000472326 ZNF837Q96EG3 531 aaPredicted RBP13.28□□□□□ -0.28
SGCE-210ENST00000472326 SLAIN2Q9P270 581 aa13.28□□□□□ -0.28
SGCE-210ENST00000472326 CHMP3Q9Y3E7 222 aa13.28□□□□□ -0.28
SGCE-210ENST00000472326 IRF7Q92985 503 aa13.27□□□□□ -0.29
SGCE-210ENST00000472326 C2orf49Q9BVC5 232 aaPredicted RBP13.27□□□□□ -0.29
SGCE-210ENST00000472326 CSB-PGBD3P0DP91 1061 aa13.26□□□□□ -0.29
SGCE-210ENST00000472326 TATP17735 454 aaPredicted RBP13.26□□□□□ -0.29
SGCE-210ENST00000472326 ARSJQ5FYB0 599 aaPredicted RBP13.26□□□□□ -0.29
SGCE-210ENST00000472326 LCE2AQ5TA79 106 aaPredicted RBP13.26□□□□□ -0.29
SGCE-210ENST00000472326 SV2AQ7L0J3 742 aa13.26□□□□□ -0.29
SGCE-210ENST00000472326 PGBD3Q8N328 593 aa13.26□□□□□ -0.29
SGCE-210ENST00000472326 NANOS1Q8WY41 292 aaKnown RBP13.26□□□□□ -0.29
SGCE-210ENST00000472326 NUCKS1Q9H1E3 243 aaKnown RBP13.26□□□□□ -0.29
SGCE-210ENST00000472326 ZDHHC3Q9NYG2 299 aa13.26□□□□□ -0.29
SGCE-210ENST00000472326 H7C1W4 665 aa13.25□□□□□ -0.29
SGCE-210ENST00000472326 POTEAQ6S8J7 498 aa13.25□□□□□ -0.29
SGCE-210ENST00000472326 GTPBP3Q969Y2 492 aaKnown RBP13.25□□□□□ -0.29
SGCE-210ENST00000472326 KLRG1Q96E93 195 aa13.25□□□□□ -0.29
SGCE-210ENST00000472326 NGLY1Q96IV0 654 aa13.25□□□□□ -0.29
SGCE-210ENST00000472326 TMEM88BA6NKF7 163 aa13.24□□□□□ -0.29
SGCE-210ENST00000472326 GPR25O00155 361 aa13.24□□□□□ -0.29
SGCE-210ENST00000472326 VSIG8P0DPA2 414 aa13.24□□□□□ -0.29
SGCE-210ENST00000472326 OCLNQ16625 522 aa13.24□□□□□ -0.29
SGCE-210ENST00000472326 C1orf216Q8TAB5 229 aa13.24□□□□□ -0.29
SGCE-210ENST00000472326 PHACTR1Q9C0D0 580 aa13.24□□□□□ -0.29
SGCE-210ENST00000472326 FKBP5Q13451 457 aaPredicted RBP13.23□□□□□ -0.29
SGCE-210ENST00000472326 BICDL1Q6ZP65 573 aa13.23□□□□□ -0.29
SGCE-210ENST00000472326 STAG2Q8N3U4 1231 aa13.23□□□□□ -0.29
SGCE-210ENST00000472326 CLP1Q92989 425 aaKnown RBP13.23□□□□□ -0.29
SGCE-210ENST00000472326 CRISPLD1Q9H336 500 aa13.23□□□□□ -0.29
SGCE-210ENST00000472326 A0A1W2PNR3 127 aa13.22□□□□□ -0.29
SGCE-210ENST00000472326 GMPRP36959 345 aa13.22□□□□□ -0.29
SGCE-210ENST00000472326 HIRAP54198 1017 aaPredicted RBP13.22□□□□□ -0.29
SGCE-210ENST00000472326 ZIC5Q96T25 663 aa13.22□□□□□ -0.29
SGCE-210ENST00000472326 EFHC2Q5JST6 749 aa13.21□□□□□ -0.29
SGCE-210ENST00000472326 ALDH16A1Q8IZ83 802 aa13.21□□□□□ -0.29
SGCE-210ENST00000472326 FOXO3O43524 673 aa13.2□□□□□ -0.3
SGCE-210ENST00000472326 RHPN1Q8TCX5 695 aa13.2□□□□□ -0.3
SGCE-210ENST00000472326 RETREG2Q8NC44 543 aa13.19□□□□□ -0.3
SGCE-210ENST00000472326 C7orf43Q8WVR3 580 aa13.19□□□□□ -0.3
SGCE-210ENST00000472326 VTI1AQ96AJ9 217 aa13.19□□□□□ -0.3
SGCE-210ENST00000472326 GMCL1Q96IK5 515 aa13.19□□□□□ -0.3
SGCE-210ENST00000472326 MKNK1Q9BUB5 465 aa13.19□□□□□ -0.3
SGCE-210ENST00000472326 CXXC1Q9P0U4 656 aaPredicted RBP13.19□□□□□ -0.3
SGCE-210ENST00000472326 ATP2B4P23634 1241 aa13.18□□□□□ -0.3
SGCE-210ENST00000472326 UBAP2LQ14157 1087 aaKnown RBP13.18□□□□□ -0.3
SGCE-210ENST00000472326 RNFT1Q5M7Z0 435 aa13.17□□□□□ -0.3
SGCE-210ENST00000472326 C1orf53Q5VUE5 145 aa13.17□□□□□ -0.3
SGCE-210ENST00000472326 LRRC69Q6ZNQ3 347 aa13.17□□□□□ -0.3
SGCE-210ENST00000472326 CAPN12Q6ZSI9 719 aa13.17□□□□□ -0.3
SGCE-210ENST00000472326 COL25A1Q9BXS0 654 aaPredicted RBP13.17□□□□□ -0.3
SGCE-210ENST00000472326 GJA3Q9Y6H8 435 aa13.17□□□□□ -0.3
SGCE-210ENST00000472326 ZCCHC2Q9C0B9 1178 aaKnown RBP13.16□□□□□ -0.3
SGCE-210ENST00000472326 SCNN1AP37088 669 aa13.15□□□□□ -0.3
SGCE-210ENST00000472326 KRT76Q01546 638 aa13.15□□□□□ -0.3
SGCE-210ENST00000472326 LBRQ14739 615 aaKnown RBP13.15□□□□□ -0.3
SGCE-210ENST00000472326 FOXR1Q6PIV2 292 aa13.15□□□□□ -0.3
SGCE-210ENST00000472326 HSH2DQ96JZ2 352 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms