RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 A0A1B0GTH6 734 aa3.44□□□□□ -1.86
UBXN4-207ENST00000471246 ESPNB1AK53 854 aa3.44□□□□□ -1.86
UBXN4-207ENST00000471246 ADAMTS4O75173 837 aa3.44□□□□□ -1.86
UBXN4-207ENST00000471246 USP17L8P0C7I0 530 aa3.44□□□□□ -1.86
UBXN4-207ENST00000471246 MSX1P28360 303 aa3.44□□□□□ -1.86
UBXN4-207ENST00000471246 PCBP4P57723 403 aaKnown RBP3.44□□□□□ -1.86
UBXN4-207ENST00000471246 CTDSPL2Q05D32 466 aa3.44□□□□□ -1.86
UBXN4-207ENST00000471246 IL27Q8NEV9 243 aa3.44□□□□□ -1.86
UBXN4-207ENST00000471246 LRRN4Q8WUT4 740 aa3.44□□□□□ -1.86
UBXN4-207ENST00000471246 PCMTD1Q96MG8 357 aaPredicted RBP3.44□□□□□ -1.86
UBXN4-207ENST00000471246 GOPCQ9HD26 462 aa3.44□□□□□ -1.86
UBXN4-207ENST00000471246 AVENQ9NQS1 362 aaPredicted RBP3.44□□□□□ -1.86
UBXN4-207ENST00000471246 AP1G2O75843 785 aa3.43□□□□□ -1.86
UBXN4-207ENST00000471246 CSB-PGBD3P0DP91 1061 aa3.43□□□□□ -1.86
UBXN4-207ENST00000471246 PRKCSHP14314 528 aaPredicted RBP3.43□□□□□ -1.86
UBXN4-207ENST00000471246 RFC5P40937 340 aa3.43□□□□□ -1.86
UBXN4-207ENST00000471246 CLN3Q13286 438 aa3.43□□□□□ -1.86
UBXN4-207ENST00000471246 NBPF20Q3BBV1 942 aa3.43□□□□□ -1.86
UBXN4-207ENST00000471246 EFHC2Q5JST6 749 aa3.43□□□□□ -1.86
UBXN4-207ENST00000471246 SHISA2Q6UWI4 295 aa3.43□□□□□ -1.86
UBXN4-207ENST00000471246 C8orf86Q6ZUL3 223 aa3.43□□□□□ -1.86
UBXN4-207ENST00000471246 PGBD3Q8N328 593 aa3.43□□□□□ -1.86
UBXN4-207ENST00000471246 ADAM32Q8TC27 787 aa3.43□□□□□ -1.86
UBXN4-207ENST00000471246 LENG1Q96BZ8 264 aaPredicted RBP3.43□□□□□ -1.86
UBXN4-207ENST00000471246 MDFIQ99750 246 aa3.43□□□□□ -1.86
UBXN4-207ENST00000471246 HMX1Q9NP08 348 aaPredicted RBP3.43□□□□□ -1.86
UBXN4-207ENST00000471246 DNAAF2Q9NVR5 837 aaKnown RBP3.43□□□□□ -1.86
UBXN4-207ENST00000471246 ELOA3CA0A087WX78 387 aaPredicted RBP3.42□□□□□ -1.86
UBXN4-207ENST00000471246 ELOA3DA6NLF2 546 aaPredicted RBP3.42□□□□□ -1.86
UBXN4-207ENST00000471246 KIAA1324LA8MWY0 1029 aaPredicted RBP3.42□□□□□ -1.86
UBXN4-207ENST00000471246 M0R082 166 aa3.42□□□□□ -1.86
UBXN4-207ENST00000471246 NID1P14543 1247 aa3.42□□□□□ -1.86
UBXN4-207ENST00000471246 NR6A1Q15406 480 aa3.42□□□□□ -1.86
UBXN4-207ENST00000471246 ELOA3BQ3SY89 546 aa3.42□□□□□ -1.86
UBXN4-207ENST00000471246 POU5F2Q8N7G0 328 aa3.42□□□□□ -1.86
UBXN4-207ENST00000471246 ELOA3Q8NG57 546 aa3.42□□□□□ -1.86
UBXN4-207ENST00000471246 ZNF417Q8TAU3 575 aa3.42□□□□□ -1.86
UBXN4-207ENST00000471246 ZNF587Q96SQ5 575 aaPredicted RBP3.42□□□□□ -1.86
UBXN4-207ENST00000471246 ZCCHC2Q9C0B9 1178 aaKnown RBP3.42□□□□□ -1.86
UBXN4-207ENST00000471246 CD33P20138 364 aa3.41□□□□□ -1.86
UBXN4-207ENST00000471246 FAM182BQ5T319 152 aa3.41□□□□□ -1.86
UBXN4-207ENST00000471246 PRDM6Q9NQX0 595 aa3.41□□□□□ -1.86
UBXN4-207ENST00000471246 ADGRE2Q9UHX3 823 aa3.41□□□□□ -1.86
UBXN4-207ENST00000471246 FKBPLQ9UIM3 349 aa3.41□□□□□ -1.86
UBXN4-207ENST00000471246 STARD13Q9Y3M8 1113 aa3.41□□□□□ -1.86
UBXN4-207ENST00000471246 PCDHGC4Q9Y5F7 938 aa3.41□□□□□ -1.86
UBXN4-207ENST00000471246 ZC3H4Q9UPT8 1303 aaKnown RBP3.41□□□□□ -1.86
UBXN4-207ENST00000471246 ALBP02768 609 aa3.4□□□□□ -1.87
UBXN4-207ENST00000471246 ZNF468Q5VIY5 522 aaPredicted RBP3.4□□□□□ -1.87
UBXN4-207ENST00000471246 EPS8L1Q8TE68 723 aa3.4□□□□□ -1.87
UBXN4-207ENST00000471246 CRISPLD1Q9H336 500 aa3.4□□□□□ -1.87
UBXN4-207ENST00000471246 MAPTP10636 758 aaKnown RBP3.39□□□□□ -1.87
UBXN4-207ENST00000471246 FSTP19883 344 aa3.39□□□□□ -1.87
UBXN4-207ENST00000471246 ALAS2P22557 587 aa3.39□□□□□ -1.87
UBXN4-207ENST00000471246 TNP2Q05952 138 aa3.39□□□□□ -1.87
UBXN4-207ENST00000471246 TMEM259Q4ZIN3 620 aa3.39□□□□□ -1.87
UBXN4-207ENST00000471246 C4orf17Q53FE4 359 aa3.39□□□□□ -1.87
UBXN4-207ENST00000471246 PRR23CQ6ZRP0 262 aa3.39□□□□□ -1.87
UBXN4-207ENST00000471246 MICALL1Q8N3F8 863 aa3.39□□□□□ -1.87
UBXN4-207ENST00000471246 TRIM34Q9BYJ4 488 aa3.39□□□□□ -1.87
UBXN4-207ENST00000471246 A0A0A0MRY4 1105 aa3.38□□□□□ -1.87
UBXN4-207ENST00000471246 DCDC2BA2VCK2 349 aa3.38□□□□□ -1.87
UBXN4-207ENST00000471246 ZNF865P0CJ78 1059 aaPredicted RBP3.38□□□□□ -1.87
UBXN4-207ENST00000471246 CENPCQ03188 943 aa3.38□□□□□ -1.87
UBXN4-207ENST00000471246 PTK2Q05397 1052 aa3.38□□□□□ -1.87
UBXN4-207ENST00000471246 TRAPPC3LQ5T215 181 aa3.38□□□□□ -1.87
UBXN4-207ENST00000471246 FIGNL1Q6PIW4 674 aa3.38□□□□□ -1.87
UBXN4-207ENST00000471246 PNMA1Q8ND90 353 aa3.38□□□□□ -1.87
UBXN4-207ENST00000471246 GJD4Q96KN9 370 aaPredicted RBP3.38□□□□□ -1.87
UBXN4-207ENST00000471246 ARHGEF10LQ9HCE6 1279 aa3.38□□□□□ -1.87
UBXN4-207ENST00000471246 ATXN7O15265 892 aaPredicted RBP3.37□□□□□ -1.87
UBXN4-207ENST00000471246 ERVK-9P63128 1117 aa3.37□□□□□ -1.87
UBXN4-207ENST00000471246 SLC51AQ86UW1 340 aa3.37□□□□□ -1.87
UBXN4-207ENST00000471246 DZIP3Q86Y13 1208 aaKnown RBP3.37□□□□□ -1.87
UBXN4-207ENST00000471246 SEPT12Q8IYM1 358 aa3.37□□□□□ -1.87
UBXN4-207ENST00000471246 MTMR14Q8NCE2 650 aa3.37□□□□□ -1.87
UBXN4-207ENST00000471246 PRR12Q9ULL5 1215 aa3.37□□□□□ -1.87
UBXN4-207ENST00000471246 GPSM3Q9Y4H4 160 aa3.37□□□□□ -1.87
UBXN4-207ENST00000471246 NCANO14594 1321 aa3.37□□□□□ -1.87
UBXN4-207ENST00000471246 SOCS7O14512 581 aa3.36□□□□□ -1.87
UBXN4-207ENST00000471246 GPR37L1O60883 481 aa3.36□□□□□ -1.87
UBXN4-207ENST00000471246 IL2RAP01589 272 aa3.36□□□□□ -1.87
UBXN4-207ENST00000471246 SPINK2P20155 84 aa3.36□□□□□ -1.87
UBXN4-207ENST00000471246 CC2D2BQ6DHV5 1058 aa3.36□□□□□ -1.87
UBXN4-207ENST00000471246 BANK1Q8NDB2 785 aa3.36□□□□□ -1.87
UBXN4-207ENST00000471246 WFDC12Q8WWY7 111 aa3.36□□□□□ -1.87
UBXN4-207ENST00000471246 MEGF10Q96KG7 1140 aa3.36□□□□□ -1.87
UBXN4-207ENST00000471246 ZSCAN10Q96SZ4 725 aaPredicted RBP3.36□□□□□ -1.87
UBXN4-207ENST00000471246 RAB6BQ9NRW1 208 aa3.36□□□□□ -1.87
UBXN4-207ENST00000471246 USP21Q9UK80 565 aa3.36□□□□□ -1.87
UBXN4-207ENST00000471246 HRH3Q9Y5N1 445 aa3.36□□□□□ -1.87
UBXN4-207ENST00000471246 ADARB2-AS1A8MUL3 147 aa3.35□□□□□ -1.87
UBXN4-207ENST00000471246 PRRG2O14669 202 aa3.35□□□□□ -1.87
UBXN4-207ENST00000471246 KHNYNO15037 678 aaKnown RBP3.35□□□□□ -1.87
UBXN4-207ENST00000471246 TGFB1P01137 390 aa3.35□□□□□ -1.87
UBXN4-207ENST00000471246 FBXO45P0C2W1 286 aa3.35□□□□□ -1.87
UBXN4-207ENST00000471246 NOS3P29474 1203 aa3.35□□□□□ -1.87
UBXN4-207ENST00000471246 IREB2P48200 963 aaKnown RBP3.35□□□□□ -1.87
UBXN4-207ENST00000471246 C20orf204Q6ZNR8 217 aa3.35□□□□□ -1.87
UBXN4-207ENST00000471246 CYP2U1Q7Z449 544 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms