RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 NCOA3Q9Y6Q9 1424 aa21.78■■□□□ 1.08
MCF2L-221ENST00000469415 RHPN1Q8TCX5 695 aa21.78■■□□□ 1.08
MCF2L-221ENST00000469415 CCDC9Q9Y3X0 531 aaKnown RBP21.78■■□□□ 1.08
MCF2L-221ENST00000469415 SLIT1O75093 1534 aa21.77■■□□□ 1.08
MCF2L-221ENST00000469415 CAVIN1Q6NZI2 390 aaKnown RBP21.77■■□□□ 1.08
MCF2L-221ENST00000469415 CWC27Q6UX04 472 aaKnown RBP21.77■■□□□ 1.08
MCF2L-221ENST00000469415 KRT28Q7Z3Y7 464 aa21.77■■□□□ 1.08
MCF2L-221ENST00000469415 SPG7Q9UQ90 795 aa21.77■■□□□ 1.08
MCF2L-221ENST00000469415 CPA1P15085 419 aa21.76■■□□□ 1.07
MCF2L-221ENST00000469415 KCNH5Q8NCM2 988 aa21.76■■□□□ 1.07
MCF2L-221ENST00000469415 KLHDC4Q8TBB5 520 aa21.76■■□□□ 1.07
MCF2L-221ENST00000469415 IBTKQ9P2D0 1353 aaPredicted RBP21.75■■□□□ 1.07
MCF2L-221ENST00000469415 RBM27Q9P2N5 1060 aaKnown RBP21.75■■□□□ 1.07
MCF2L-221ENST00000469415 RNMTO43148 476 aaKnown RBP21.75■■□□□ 1.07
MCF2L-221ENST00000469415 TMX3Q96JJ7 454 aa21.75■■□□□ 1.07
MCF2L-221ENST00000469415 FSD2A1L4K1 749 aa21.74■■□□□ 1.07
MCF2L-221ENST00000469415 BEND3Q5T5X7 828 aa21.74■■□□□ 1.07
MCF2L-221ENST00000469415 AKAP4Q5JQC9 854 aa21.74■■□□□ 1.07
MCF2L-221ENST00000469415 RGPD1P0DJD0 1748 aa21.74■■□□□ 1.07
MCF2L-221ENST00000469415 OSBPL3Q9H4L5 887 aa21.73■■□□□ 1.07
MCF2L-221ENST00000469415 GDPD2Q9HCC8 539 aa21.73■■□□□ 1.07
MCF2L-221ENST00000469415 ARHGEF25Q86VW2 580 aa21.72■■□□□ 1.07
MCF2L-221ENST00000469415 SSH3Q8TE77 659 aa21.72■■□□□ 1.07
MCF2L-221ENST00000469415 MCCP23508 829 aa21.72■■□□□ 1.07
MCF2L-221ENST00000469415 FER1L4A9Z1Z3 1794 aa21.71■■□□□ 1.07
MCF2L-221ENST00000469415 MRE11P49959 708 aa21.71■■□□□ 1.07
MCF2L-221ENST00000469415 ANKARQ7Z5J8 1434 aa21.71■■□□□ 1.07
MCF2L-221ENST00000469415 NFATC2IPQ8NCF5 419 aa21.71■■□□□ 1.07
MCF2L-221ENST00000469415 SALL3Q9BXA9 1300 aa21.7■■□□□ 1.06
MCF2L-221ENST00000469415 CCDC8Q9H0W5 538 aaPredicted RBP21.7■■□□□ 1.06
MCF2L-221ENST00000469415 DBF4Q9UBU7 674 aaPredicted RBP21.7■■□□□ 1.06
MCF2L-221ENST00000469415 ZDHHC9Q9Y397 364 aa21.7■■□□□ 1.06
MCF2L-221ENST00000469415 NALCNQ8IZF0 1738 aa21.7■■□□□ 1.06
MCF2L-221ENST00000469415 GIGYF1O75420 1035 aaPredicted RBP21.69■■□□□ 1.06
MCF2L-221ENST00000469415 NWD1Q149M9 1564 aa21.69■■□□□ 1.06
MCF2L-221ENST00000469415 NUCB2P80303 420 aa21.69■■□□□ 1.06
MCF2L-221ENST00000469415 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.69■■□□□ 1.06
MCF2L-221ENST00000469415 RIC3Q7Z5B4 369 aa21.69■■□□□ 1.06
MCF2L-221ENST00000469415 RAPGEF4Q8WZA2 1011 aa21.69■■□□□ 1.06
MCF2L-221ENST00000469415 KIF1BPQ96EK5 621 aa21.68■■□□□ 1.06
MCF2L-221ENST00000469415 NSFL1CQ9UNZ2 370 aaKnown RBP21.67■■□□□ 1.06
MCF2L-221ENST00000469415 PXDNQ92626 1479 aa21.67■■□□□ 1.06
MCF2L-221ENST00000469415 AACSQ86V21 672 aa21.66■■□□□ 1.06
MCF2L-221ENST00000469415 FMN2Q9NZ56 1722 aa21.66■■□□□ 1.06
MCF2L-221ENST00000469415 ADCY9O60503 1353 aa21.66■■□□□ 1.06
MCF2L-221ENST00000469415 CEMIPQ8WUJ3 1361 aa21.66■■□□□ 1.06
MCF2L-221ENST00000469415 IFIT2P09913 472 aaKnown RBP21.66■■□□□ 1.06
MCF2L-221ENST00000469415 NDUFB9Q9Y6M9 179 aa21.66■■□□□ 1.06
MCF2L-221ENST00000469415 SKOR2Q2VWA4 1001 aaPredicted RBP21.65■■□□□ 1.06
MCF2L-221ENST00000469415 KIAA1211Q6ZU35 1233 aa21.65■■□□□ 1.06
MCF2L-221ENST00000469415 RASEFQ8IZ41 740 aa21.65■■□□□ 1.06
MCF2L-221ENST00000469415 CLASRPQ8N2M8 674 aaKnown RBP21.65■■□□□ 1.06
MCF2L-221ENST00000469415 PI4K2BQ8TCG2 481 aa21.65■■□□□ 1.06
MCF2L-221ENST00000469415 FAM43AQ8N2R8 423 aa21.65■■□□□ 1.06
MCF2L-221ENST00000469415 AMOTQ4VCS5 1084 aa21.64■■□□□ 1.06
MCF2L-221ENST00000469415 SUCLG2Q96I99 432 aa21.64■■□□□ 1.06
MCF2L-221ENST00000469415 DIAPH3Q9NSV4 1193 aa21.64■■□□□ 1.06
MCF2L-221ENST00000469415 ATP5J2-PTCD1G3V325 749 aa21.64■■□□□ 1.05
MCF2L-221ENST00000469415 PTCD1O75127 700 aaKnown RBP21.64■■□□□ 1.05
MCF2L-221ENST00000469415 TRIM44Q96DX7 344 aaPredicted RBP21.64■■□□□ 1.05
MCF2L-221ENST00000469415 BICC1Q9H694 974 aaKnown RBP21.64■■□□□ 1.05
MCF2L-221ENST00000469415 LMBRD1Q9NUN5 540 aa21.64■■□□□ 1.05
MCF2L-221ENST00000469415 KSR2Q6VAB6 950 aa21.63■■□□□ 1.05
MCF2L-221ENST00000469415 STAP2Q9UGK3 403 aa21.63■■□□□ 1.05
MCF2L-221ENST00000469415 KCNJ4P48050 445 aa21.63■■□□□ 1.05
MCF2L-221ENST00000469415 HSPA2P54652 639 aa21.63■■□□□ 1.05
MCF2L-221ENST00000469415 POLA2Q14181 598 aa21.63■■□□□ 1.05
MCF2L-221ENST00000469415 RNF214Q8ND24 703 aa21.63■■□□□ 1.05
MCF2L-221ENST00000469415 TCEANC2Q96MN5 208 aa21.63■■□□□ 1.05
MCF2L-221ENST00000469415 BOLA2Q9H3K6 86 aa21.63■■□□□ 1.05
MCF2L-221ENST00000469415 ZNF330Q9Y3S2 320 aaPredicted RBP21.63■■□□□ 1.05
MCF2L-221ENST00000469415 COPS6Q7L5N1 327 aa21.62■■□□□ 1.05
MCF2L-221ENST00000469415 CNTROBQ8N137 903 aa21.62■■□□□ 1.05
MCF2L-221ENST00000469415 EDC3Q96F86 508 aaKnown RBP21.62■■□□□ 1.05
MCF2L-221ENST00000469415 MYD88Q99836 296 aa21.62■■□□□ 1.05
MCF2L-221ENST00000469415 TLR7Q9NYK1 1049 aaKnown RBP21.62■■□□□ 1.05
MCF2L-221ENST00000469415 ATF3P18847 181 aa21.62■■□□□ 1.05
MCF2L-221ENST00000469415 XAGE3Q8WTP9 111 aa21.62■■□□□ 1.05
MCF2L-221ENST00000469415 USP16Q9Y5T5 823 aa21.62■■□□□ 1.05
MCF2L-221ENST00000469415 RAB11FIP3O75154 756 aa21.61■■□□□ 1.05
MCF2L-221ENST00000469415 ZNF496Q96IT1 587 aaPredicted RBP21.61■■□□□ 1.05
MCF2L-221ENST00000469415 GPT2Q8TD30 523 aa21.61■■□□□ 1.05
MCF2L-221ENST00000469415 CHMP3Q9Y3E7 222 aa21.61■■□□□ 1.05
MCF2L-221ENST00000469415 KLHL40Q2TBA0 621 aa21.6■■□□□ 1.05
MCF2L-221ENST00000469415 PRPF40BQ6NWY9 871 aaKnown RBP21.6■■□□□ 1.05
MCF2L-221ENST00000469415 CWC22Q9HCG8 908 aaKnown RBP21.6■■□□□ 1.05
MCF2L-221ENST00000469415 BABAM1Q9NWV8 329 aa21.6■■□□□ 1.05
MCF2L-221ENST00000469415 NASPP49321 788 aaPredicted RBP21.6■■□□□ 1.05
MCF2L-221ENST00000469415 PTH1RQ03431 593 aa21.6■■□□□ 1.05
MCF2L-221ENST00000469415 ADGRL3Q9HAR2 1447 aa21.59■■□□□ 1.05
MCF2L-221ENST00000469415 SYCE3A1L190 88 aa21.59■■□□□ 1.05
MCF2L-221ENST00000469415 XRN1Q8IZH2 1706 aaKnown RBP21.59■■□□□ 1.05
MCF2L-221ENST00000469415 G3BP1Q13283 466 aaKnown RBP eCLIP21.59■■□□□ 1.05
MCF2L-221ENST00000469415 ZNF790Q6PG37 636 aa21.59■■□□□ 1.05
MCF2L-221ENST00000469415 GRM8O00222 908 aa21.58■■□□□ 1.05
MCF2L-221ENST00000469415 CYP2E1P05181 493 aaPredicted RBP21.58■■□□□ 1.05
MCF2L-221ENST00000469415 CASTP20810 708 aaKnown RBP21.58■■□□□ 1.05
MCF2L-221ENST00000469415 ZSCAN23Q3MJ62 389 aa21.58■■□□□ 1.05
MCF2L-221ENST00000469415 FAM227BQ96M60 508 aa21.58■■□□□ 1.05
MCF2L-221ENST00000469415 SGSM2O43147 1006 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms