RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 ARSJQ5FYB0 599 aaPredicted RBP8.71□□□□□ -1.02
SCFD1-205ENST00000469043 BTBD6Q96KE9 485 aa8.71□□□□□ -1.02
SCFD1-205ENST00000469043 CDK2AP1O14519 115 aa8.7□□□□□ -1.02
SCFD1-205ENST00000469043 ADAM23O75077 832 aa8.7□□□□□ -1.02
SCFD1-205ENST00000469043 PROCP04070 461 aa8.7□□□□□ -1.02
SCFD1-205ENST00000469043 TATP17735 454 aaPredicted RBP8.7□□□□□ -1.02
SCFD1-205ENST00000469043 SLC4A9Q96Q91 983 aa8.7□□□□□ -1.02
SCFD1-205ENST00000469043 A0A1W2PNR3 127 aa8.69□□□□□ -1.02
SCFD1-205ENST00000469043 A6NJY4 79 aa8.69□□□□□ -1.02
SCFD1-205ENST00000469043 EPXP11678 715 aa8.69□□□□□ -1.02
SCFD1-205ENST00000469043 ATP4AP20648 1035 aa8.69□□□□□ -1.02
SCFD1-205ENST00000469043 DNAAF2Q9NVR5 837 aaKnown RBP8.69□□□□□ -1.02
SCFD1-205ENST00000469043 GJA3Q9Y6H8 435 aa8.69□□□□□ -1.02
SCFD1-205ENST00000469043 KRBA1A5PL33 1030 aa8.68□□□□□ -1.02
SCFD1-205ENST00000469043 NEURL1BA8MQ27 555 aa8.68□□□□□ -1.02
SCFD1-205ENST00000469043 GNB5O14775 395 aa8.68□□□□□ -1.02
SCFD1-205ENST00000469043 BACH1O14867 736 aa8.68□□□□□ -1.02
SCFD1-205ENST00000469043 GRIN2CQ14957 1233 aa8.68□□□□□ -1.02
SCFD1-205ENST00000469043 MTFR1Q15390 333 aa8.68□□□□□ -1.02
SCFD1-205ENST00000469043 EML3Q32P44 896 aa8.68□□□□□ -1.02
SCFD1-205ENST00000469043 LINC00114Q6XXX2 140 aa8.68□□□□□ -1.02
SCFD1-205ENST00000469043 CABP1Q9NZU7 370 aa8.68□□□□□ -1.02
SCFD1-205ENST00000469043 TMEM229AB2RXF0 380 aa8.67□□□□□ -1.02
SCFD1-205ENST00000469043 LZTS3O60299 673 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-205ENST00000469043 MAPTP10636 758 aaKnown RBP8.67□□□□□ -1.02
SCFD1-205ENST00000469043 FAM182BQ5T319 152 aa8.67□□□□□ -1.02
SCFD1-205ENST00000469043 WWC1Q8IX03 1113 aa8.67□□□□□ -1.02
SCFD1-205ENST00000469043 ZDHHC3Q9NYG2 299 aa8.67□□□□□ -1.02
SCFD1-205ENST00000469043 KHNYNO15037 678 aaKnown RBP8.66□□□□□ -1.02
SCFD1-205ENST00000469043 COL8A1P27658 744 aa8.66□□□□□ -1.02
SCFD1-205ENST00000469043 ADH6P28332 368 aa8.66□□□□□ -1.02
SCFD1-205ENST00000469043 TNP2Q05952 138 aa8.66□□□□□ -1.02
SCFD1-205ENST00000469043 AVENQ9NQS1 362 aaPredicted RBP8.66□□□□□ -1.02
SCFD1-205ENST00000469043 NOP53Q9NZM5 478 aaKnown RBP8.66□□□□□ -1.02
SCFD1-205ENST00000469043 NOD1Q9Y239 953 aa8.66□□□□□ -1.02
SCFD1-205ENST00000469043 PCDHGA11Q9Y5H2 935 aa8.66□□□□□ -1.02
SCFD1-205ENST00000469043 DCDC2BA2VCK2 349 aa8.65□□□□□ -1.02
SCFD1-205ENST00000469043 SKIP12755 728 aa8.65□□□□□ -1.02
SCFD1-205ENST00000469043 BICDL1Q6ZP65 573 aa8.65□□□□□ -1.02
SCFD1-205ENST00000469043 ZIC5Q96T25 663 aa8.65□□□□□ -1.02
SCFD1-205ENST00000469043 PRR12Q9ULL5 1215 aa8.65□□□□□ -1.02
SCFD1-205ENST00000469043 IQSEC3Q9UPP2 1182 aaPredicted RBP8.65□□□□□ -1.02
SCFD1-205ENST00000469043 K7ELQ4 463 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-205ENST00000469043 HOXB4P17483 251 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-205ENST00000469043 BAG6P46379 1132 aa8.64□□□□□ -1.03
SCFD1-205ENST00000469043 MCM6Q14566 821 aa8.64□□□□□ -1.03
SCFD1-205ENST00000469043 SUV39H2Q9H5I1 410 aa8.64□□□□□ -1.03
SCFD1-205ENST00000469043 CD33P20138 364 aa8.63□□□□□ -1.03
SCFD1-205ENST00000469043 PSME1Q06323 249 aa8.63□□□□□ -1.03
SCFD1-205ENST00000469043 CHSY3Q70JA7 882 aa8.63□□□□□ -1.03
SCFD1-205ENST00000469043 GTF3C3Q9Y5Q9 886 aa8.63□□□□□ -1.03
SCFD1-205ENST00000469043 PIK3CDO00329 1044 aa8.62□□□□□ -1.03
SCFD1-205ENST00000469043 FAM157BP0CG42 384 aa8.62□□□□□ -1.03
SCFD1-205ENST00000469043 GTF2IP78347 998 aa8.62□□□□□ -1.03
SCFD1-205ENST00000469043 ZNF295-AS1Q8N0V1 137 aa8.62□□□□□ -1.03
SCFD1-205ENST00000469043 NFATC2IPQ8NCF5 419 aa8.62□□□□□ -1.03
SCFD1-205ENST00000469043 NEUROD4Q9HD90 331 aa8.62□□□□□ -1.03
SCFD1-205ENST00000469043 MARK1Q9P0L2 795 aa8.62□□□□□ -1.03
SCFD1-205ENST00000469043 DGKGP49619 791 aa8.61□□□□□ -1.03
SCFD1-205ENST00000469043 LAMC2Q13753 1193 aa8.61□□□□□ -1.03
SCFD1-205ENST00000469043 SAMD5Q5TGI4 173 aa8.61□□□□□ -1.03
SCFD1-205ENST00000469043 ALG2Q9H553 416 aa8.61□□□□□ -1.03
SCFD1-205ENST00000469043 COG6Q9Y2V7 657 aa8.61□□□□□ -1.03
SCFD1-205ENST00000469043 PARP3Q9Y6F1 533 aa8.61□□□□□ -1.03
SCFD1-205ENST00000469043 C1QTNF9BB2RNN3 333 aa8.6□□□□□ -1.03
SCFD1-205ENST00000469043 SCHIP1Q9P0W5 487 aaPredicted RBP8.6□□□□□ -1.03
SCFD1-205ENST00000469043 KLF15Q9UIH9 416 aa8.6□□□□□ -1.03
SCFD1-205ENST00000469043 USP3Q9Y6I4 520 aa8.6□□□□□ -1.03
SCFD1-205ENST00000469043 ALAS2P22557 587 aa8.59□□□□□ -1.03
SCFD1-205ENST00000469043 PCBP4P57723 403 aaKnown RBP8.59□□□□□ -1.03
SCFD1-205ENST00000469043 NCOA4Q13772 614 aa8.59□□□□□ -1.03
SCFD1-205ENST00000469043 ZNF468Q5VIY5 522 aaPredicted RBP8.59□□□□□ -1.03
SCFD1-205ENST00000469043 ERICH6Q7L0X2 663 aa8.59□□□□□ -1.03
SCFD1-205ENST00000469043 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.59□□□□□ -1.03
SCFD1-205ENST00000469043 L3MBTL2Q969R5 705 aa8.59□□□□□ -1.03
SCFD1-205ENST00000469043 ZNF358Q9NW07 568 aa8.59□□□□□ -1.03
SCFD1-205ENST00000469043 RAD21O60216 631 aa8.58□□□□□ -1.04
SCFD1-205ENST00000469043 FURINP09958 794 aa8.58□□□□□ -1.04
SCFD1-205ENST00000469043 NOS2P35228 1153 aa8.58□□□□□ -1.04
SCFD1-205ENST00000469043 TEAD4Q15561 434 aa8.58□□□□□ -1.04
SCFD1-205ENST00000469043 FCHSD1Q86WN1 690 aa8.58□□□□□ -1.04
SCFD1-205ENST00000469043 TRIM50Q86XT4 487 aa8.58□□□□□ -1.04
SCFD1-205ENST00000469043 TXLNAP40222 546 aa8.57□□□□□ -1.04
SCFD1-205ENST00000469043 HCN2Q9UL51 889 aa8.57□□□□□ -1.04
SCFD1-205ENST00000469043 ZNF232Q9UNY5 417 aa8.57□□□□□ -1.04
SCFD1-205ENST00000469043 GPC6Q9Y625 555 aaPredicted RBP8.57□□□□□ -1.04
SCFD1-205ENST00000469043 EFSO43281 561 aa8.56□□□□□ -1.04
SCFD1-205ENST00000469043 CD163Q86VB7 1156 aa8.56□□□□□ -1.04
SCFD1-205ENST00000469043 HOMEZQ8IX15 550 aa8.56□□□□□ -1.04
SCFD1-205ENST00000469043 ELOA3CA0A087WX78 387 aaPredicted RBP8.55□□□□□ -1.04
SCFD1-205ENST00000469043 ELOA3DA6NLF2 546 aaPredicted RBP8.55□□□□□ -1.04
SCFD1-205ENST00000469043 USP17L5A8MUK1 530 aa8.55□□□□□ -1.04
SCFD1-205ENST00000469043 ELOA3BQ3SY89 546 aa8.55□□□□□ -1.04
SCFD1-205ENST00000469043 LRRC69Q6ZNQ3 347 aa8.55□□□□□ -1.04
SCFD1-205ENST00000469043 DEPDC4Q8N2C3 294 aa8.55□□□□□ -1.04
SCFD1-205ENST00000469043 ELOA3Q8NG57 546 aa8.55□□□□□ -1.04
SCFD1-205ENST00000469043 ZDHHC1Q8WTX9 485 aa8.55□□□□□ -1.04
SCFD1-205ENST00000469043 STRN4Q9NRL3 753 aa8.55□□□□□ -1.04
SCFD1-205ENST00000469043 CHMP3Q9Y3E7 222 aa8.55□□□□□ -1.04
SCFD1-205ENST00000469043 SERTM1A2A2V5 107 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms