RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 RRAGCQ9HB90 399 aa16.74■□□□□ 0.27
UBR4-211ENST00000467272 LGR6Q9HBX8 967 aa16.74■□□□□ 0.27
UBR4-211ENST00000467272 NARFQ9UHQ1 456 aa16.74■□□□□ 0.27
UBR4-211ENST00000467272 TNRC6CQ9HCJ0 1690 aaKnown RBP16.74■□□□□ 0.27
UBR4-211ENST00000467272 TRIM26Q12899 539 aaPredicted RBP16.73■□□□□ 0.27
UBR4-211ENST00000467272 HSPA5P11021 654 aaKnown RBP16.72■□□□□ 0.27
UBR4-211ENST00000467272 AMER1Q5JTC6 1135 aaPredicted RBP16.72■□□□□ 0.27
UBR4-211ENST00000467272 MORC1Q86VD1 984 aa16.71■□□□□ 0.27
UBR4-211ENST00000467272 VSIG10Q8N0Z9 540 aa16.71■□□□□ 0.27
UBR4-211ENST00000467272 COL15A1P39059 1388 aa16.71■□□□□ 0.27
UBR4-211ENST00000467272 DLEC1Q9Y238 1755 aa16.71■□□□□ 0.27
UBR4-211ENST00000467272 GLTPD2A6NH11 291 aa16.7■□□□□ 0.26
UBR4-211ENST00000467272 POTECB2RU33 542 aa16.7■□□□□ 0.26
UBR4-211ENST00000467272 RNMTO43148 476 aaKnown RBP16.7■□□□□ 0.26
UBR4-211ENST00000467272 ZPR1O75312 459 aa16.7■□□□□ 0.26
UBR4-211ENST00000467272 RASSF7Q02833 373 aa16.7■□□□□ 0.26
UBR4-211ENST00000467272 C16orf71Q8IYS4 520 aaPredicted RBP16.7■□□□□ 0.26
UBR4-211ENST00000467272 SMC1BQ8NDV3 1235 aa16.7■□□□□ 0.26
UBR4-211ENST00000467272 ZBTB1Q9Y2K1 713 aa16.7■□□□□ 0.26
UBR4-211ENST00000467272 CARMIL3Q8ND23 1372 aa16.69■□□□□ 0.26
UBR4-211ENST00000467272 AFDNP55196 1824 aaKnown RBP16.69■□□□□ 0.26
UBR4-211ENST00000467272 NFKBIEO00221 500 aa16.69■□□□□ 0.26
UBR4-211ENST00000467272 LMNB1P20700 586 aa16.69■□□□□ 0.26
UBR4-211ENST00000467272 EIF4G2P78344 907 aaKnown RBP eCLIP16.69■□□□□ 0.26
UBR4-211ENST00000467272 SLC39A6Q13433 755 aa16.69■□□□□ 0.26
UBR4-211ENST00000467272 SERPINB2P05120 415 aa16.68■□□□□ 0.26
UBR4-211ENST00000467272 UBR2Q8IWV8 1755 aa16.67■□□□□ 0.26
UBR4-211ENST00000467272 EIF5P55010 431 aaKnown RBP16.67■□□□□ 0.26
UBR4-211ENST00000467272 POLR3GLQ9BT43 218 aa16.67■□□□□ 0.26
UBR4-211ENST00000467272 VEGFAP15692 232 aaPredicted RBP16.66■□□□□ 0.26
UBR4-211ENST00000467272 MTHFSDQ2M296 383 aaKnown RBP16.66■□□□□ 0.26
UBR4-211ENST00000467272 TTLL6Q8N841 843 aa16.66■□□□□ 0.26
UBR4-211ENST00000467272 PER1O15534 1290 aaPredicted RBP16.64■□□□□ 0.25
UBR4-211ENST00000467272 C2CD5Q86YS7 1000 aa16.63■□□□□ 0.25
UBR4-211ENST00000467272 KNSTRNQ9Y448 316 aa16.63■□□□□ 0.25
UBR4-211ENST00000467272 TIAM2Q8IVF5 1701 aa16.62■□□□□ 0.25
UBR4-211ENST00000467272 COL3A1P02461 1466 aaPredicted RBP16.61■□□□□ 0.25
UBR4-211ENST00000467272 ANKRD31Q8N7Z5 1873 aa16.61■□□□□ 0.25
UBR4-211ENST00000467272 H0YIN7 160 aa16.61■□□□□ 0.25
UBR4-211ENST00000467272 HMOX1P09601 288 aa16.61■□□□□ 0.25
UBR4-211ENST00000467272 BRIP1Q9BX63 1249 aa16.61■□□□□ 0.25
UBR4-211ENST00000467272 LTBP3Q9NS15 1303 aa16.61■□□□□ 0.25
UBR4-211ENST00000467272 TBC1D9BQ66K14 1250 aa16.6■□□□□ 0.25
UBR4-211ENST00000467272 ZNF496Q96IT1 587 aaPredicted RBP16.6■□□□□ 0.25
UBR4-211ENST00000467272 PDZRN3Q9UPQ7 1066 aa16.6■□□□□ 0.25
UBR4-211ENST00000467272 SCN7AQ01118 1682 aa16.59■□□□□ 0.25
UBR4-211ENST00000467272 A0A087WZG4 1122 aa16.59■□□□□ 0.25
UBR4-211ENST00000467272 CANXP27824 592 aaKnown RBP16.59■□□□□ 0.25
UBR4-211ENST00000467272 PRR5LQ6MZQ0 368 aa16.59■□□□□ 0.25
UBR4-211ENST00000467272 IL17REQ8NFR9 667 aa16.59■□□□□ 0.25
UBR4-211ENST00000467272 COL11A2P13942 1736 aaPredicted RBP16.59■□□□□ 0.25
UBR4-211ENST00000467272 STARD3NLO95772 234 aa16.58■□□□□ 0.24
UBR4-211ENST00000467272 TNS4Q8IZW8 715 aa16.58■□□□□ 0.24
UBR4-211ENST00000467272 CEMIPQ8WUJ3 1361 aa16.58■□□□□ 0.24
UBR4-211ENST00000467272 HEG1Q9ULI3 1381 aa16.58■□□□□ 0.24
UBR4-211ENST00000467272 FER1L6Q2WGJ9 1857 aa16.57■□□□□ 0.24
UBR4-211ENST00000467272 KIF7Q2M1P5 1343 aa16.57■□□□□ 0.24
UBR4-211ENST00000467272 DIAPH1O60610 1272 aaKnown RBP16.57■□□□□ 0.24
UBR4-211ENST00000467272 HSPA1AP0DMV8 641 aaKnown RBP16.57■□□□□ 0.24
UBR4-211ENST00000467272 HSPA1BP0DMV9 641 aaKnown RBP16.57■□□□□ 0.24
UBR4-211ENST00000467272 IL6STP40189 918 aaPredicted RBP16.57■□□□□ 0.24
UBR4-211ENST00000467272 ZNF790Q6PG37 636 aa16.57■□□□□ 0.24
UBR4-211ENST00000467272 VIRMAQ69YN4 1812 aaKnown RBP16.56■□□□□ 0.24
UBR4-211ENST00000467272 SIPA1L3O60292 1781 aaPredicted RBP16.56■□□□□ 0.24
UBR4-211ENST00000467272 CAMTA2O94983 1202 aa16.56■□□□□ 0.24
UBR4-211ENST00000467272 PDE6BP35913 854 aa16.56■□□□□ 0.24
UBR4-211ENST00000467272 C7orf43Q8WVR3 580 aa16.56■□□□□ 0.24
UBR4-211ENST00000467272 TEX13AQ9BXU3 409 aaPredicted RBP16.56■□□□□ 0.24
UBR4-211ENST00000467272 C21orf2O43822 256 aa16.55■□□□□ 0.24
UBR4-211ENST00000467272 BICDL1Q6ZP65 573 aa16.55■□□□□ 0.24
UBR4-211ENST00000467272 NPC1L1Q9UHC9 1359 aa16.54■□□□□ 0.24
UBR4-211ENST00000467272 KLRG2A4D1S0 409 aaPredicted RBP16.54■□□□□ 0.24
UBR4-211ENST00000467272 POTEIP0CG38 1075 aa16.54■□□□□ 0.24
UBR4-211ENST00000467272 POTEJP0CG39 1038 aa16.54■□□□□ 0.24
UBR4-211ENST00000467272 SRGNP10124 158 aa16.54■□□□□ 0.24
UBR4-211ENST00000467272 STYK1Q6J9G0 422 aa16.54■□□□□ 0.24
UBR4-211ENST00000467272 DPY19L2Q6NUT2 758 aa16.54■□□□□ 0.24
UBR4-211ENST00000467272 CREBZFQ9NS37 354 aa16.54■□□□□ 0.24
UBR4-211ENST00000467272 TBC1D2BQ9UPU7 963 aa16.54■□□□□ 0.24
UBR4-211ENST00000467272 DICER1Q9UPY3 1922 aaKnown RBP16.54■□□□□ 0.24
UBR4-211ENST00000467272 PASKQ96RG2 1323 aa16.53■□□□□ 0.24
UBR4-211ENST00000467272 ERFEQ4G0M1 354 aa16.53■□□□□ 0.24
UBR4-211ENST00000467272 CHADLQ6NUI6 762 aa16.53■□□□□ 0.24
UBR4-211ENST00000467272 TTC5Q8N0Z6 440 aa16.53■□□□□ 0.24
UBR4-211ENST00000467272 L3MBTL3Q96JM7 780 aaPredicted RBP16.53■□□□□ 0.24
UBR4-211ENST00000467272 CCDC88AQ3V6T2 1871 aa16.52■□□□□ 0.24
UBR4-211ENST00000467272 GNAT3A8MTJ3 354 aa16.52■□□□□ 0.24
UBR4-211ENST00000467272 A1BGP04217 495 aa16.52■□□□□ 0.24
UBR4-211ENST00000467272 CCDC24Q8N4L8 307 aa16.52■□□□□ 0.24
UBR4-211ENST00000467272 ZNF622Q969S3 477 aaKnown RBP eCLIP16.52■□□□□ 0.246e-14■■□□□ 14.5
UBR4-211ENST00000467272 TAOK3Q9H2K8 898 aa16.52■□□□□ 0.24
UBR4-211ENST00000467272 PRPF40BQ6NWY9 871 aaKnown RBP16.51■□□□□ 0.23
UBR4-211ENST00000467272 CNKSR1Q969H4 720 aa16.51■□□□□ 0.23
UBR4-211ENST00000467272 SLX4Q8IY92 1834 aa16.51■□□□□ 0.23
UBR4-211ENST00000467272 KCNQ3O43525 872 aa16.5■□□□□ 0.23
UBR4-211ENST00000467272 DDNO94850 711 aaPredicted RBP16.5■□□□□ 0.23
UBR4-211ENST00000467272 GAS2L2Q8NHY3 880 aa16.5■□□□□ 0.23
UBR4-211ENST00000467272 FMNL2Q96PY5 1086 aa16.5■□□□□ 0.23
UBR4-211ENST00000467272 ARFGEF2Q9Y6D5 1785 aa16.5■□□□□ 0.23
UBR4-211ENST00000467272 BCORQ6W2J9 1755 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms