RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 RSPH6AQ9H0K4 717 aa8.73□□□□□ -1.01
SPTA1-202ENST00000461624 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.73□□□□□ -1.01
SPTA1-202ENST00000461624 ARHGEF5Q12774 1597 aa8.73□□□□□ -1.01
SPTA1-202ENST00000461624 EFCAB6Q5THR3 1501 aa8.72□□□□□ -1.01
SPTA1-202ENST00000461624 NPAS3Q8IXF0 933 aa8.72□□□□□ -1.01
SPTA1-202ENST00000461624 TSC1Q92574 1164 aa8.72□□□□□ -1.01
SPTA1-202ENST00000461624 NHSL1Q5SYE7 1610 aa8.72□□□□□ -1.01
SPTA1-202ENST00000461624 SETD5Q9C0A6 1442 aa8.71□□□□□ -1.01
SPTA1-202ENST00000461624 NCOA3Q9Y6Q9 1424 aa8.71□□□□□ -1.01
SPTA1-202ENST00000461624 TIMP2P16035 220 aa8.71□□□□□ -1.02
SPTA1-202ENST00000461624 INSM1Q01101 510 aaPredicted RBP8.71□□□□□ -1.02
SPTA1-202ENST00000461624 NBPF14Q5TI25 921 aa8.71□□□□□ -1.02
SPTA1-202ENST00000461624 SLC26A8Q96RN1 970 aa8.71□□□□□ -1.02
SPTA1-202ENST00000461624 EID1Q9Y6B2 187 aa8.71□□□□□ -1.02
SPTA1-202ENST00000461624 WDR4P57081 412 aaKnown RBP8.7□□□□□ -1.02
SPTA1-202ENST00000461624 NR5A1Q13285 461 aa8.7□□□□□ -1.02
SPTA1-202ENST00000461624 SLC16A10Q8TF71 515 aa8.7□□□□□ -1.02
SPTA1-202ENST00000461624 KLF16Q9BXK1 252 aaPredicted RBP8.7□□□□□ -1.02
SPTA1-202ENST00000461624 NXF1Q9UBU9 619 aaKnown RBP8.7□□□□□ -1.02
SPTA1-202ENST00000461624 SCARF1Q14162 830 aa8.69□□□□□ -1.02
SPTA1-202ENST00000461624 AGERQ15109 404 aa8.69□□□□□ -1.02
SPTA1-202ENST00000461624 C4orf48Q5BLP8 95 aa8.69□□□□□ -1.02
SPTA1-202ENST00000461624 MRPL14Q6P1L8 145 aaKnown RBP8.69□□□□□ -1.02
SPTA1-202ENST00000461624 C1QTNF2Q9BXJ5 285 aa8.69□□□□□ -1.02
SPTA1-202ENST00000461624 QTRT2Q9H974 415 aaKnown RBP8.69□□□□□ -1.02
SPTA1-202ENST00000461624 CEP162Q5TB80 1403 aa8.69□□□□□ -1.02
SPTA1-202ENST00000461624 ADGRB3O60242 1522 aa8.69□□□□□ -1.02
SPTA1-202ENST00000461624 ASXL1Q8IXJ9 1541 aa8.69□□□□□ -1.02
SPTA1-202ENST00000461624 UBTFP17480 764 aaKnown RBP8.68□□□□□ -1.02
SPTA1-202ENST00000461624 NEUROD2Q15784 382 aa8.68□□□□□ -1.02
SPTA1-202ENST00000461624 LCE2CQ5TA81 110 aa8.68□□□□□ -1.02
SPTA1-202ENST00000461624 GPKOWQ92917 476 aaPredicted RBP eCLIP8.68□□□□□ -1.022e-6■□□□□ 8.7
SPTA1-202ENST00000461624 ZFP42Q96MM3 310 aa8.68□□□□□ -1.02
SPTA1-202ENST00000461624 STK17AQ9UEE5 414 aa8.68□□□□□ -1.02
SPTA1-202ENST00000461624 ZFYVE9O95405 1425 aa8.67□□□□□ -1.02
SPTA1-202ENST00000461624 ARID5BQ14865 1188 aa8.67□□□□□ -1.02
SPTA1-202ENST00000461624 RTL5Q5HYW3 569 aaPredicted RBP8.67□□□□□ -1.02
SPTA1-202ENST00000461624 BRINP3Q76B58 766 aa8.67□□□□□ -1.02
SPTA1-202ENST00000461624 SH3RF1Q7Z6J0 888 aa8.67□□□□□ -1.02
SPTA1-202ENST00000461624 BCL9LQ86UU0 1499 aa8.67□□□□□ -1.02
SPTA1-202ENST00000461624 PNPLA6Q8IY17 1366 aa8.67□□□□□ -1.02
SPTA1-202ENST00000461624 EHBP1L1Q8N3D4 1523 aa8.67□□□□□ -1.02
SPTA1-202ENST00000461624 MAP4K5Q9Y4K4 846 aa8.67□□□□□ -1.02
SPTA1-202ENST00000461624 ATRNO75882 1429 aa8.66□□□□□ -1.02
SPTA1-202ENST00000461624 TRMT44Q8IYL2 757 aaKnown RBP8.66□□□□□ -1.02
SPTA1-202ENST00000461624 MTUS2Q5JR59 1369 aa8.65□□□□□ -1.02
SPTA1-202ENST00000461624 GRM5P41594 1212 aa8.65□□□□□ -1.02
SPTA1-202ENST00000461624 SH3BP5LQ7L8J4 393 aa8.65□□□□□ -1.02
SPTA1-202ENST00000461624 CCDC125Q86Z20 511 aa8.65□□□□□ -1.02
SPTA1-202ENST00000461624 C8orf37Q96NL8 207 aa8.65□□□□□ -1.02
SPTA1-202ENST00000461624 LAMC1P11047 1609 aa8.65□□□□□ -1.03
SPTA1-202ENST00000461624 DCCP43146 1447 aa8.64□□□□□ -1.03
SPTA1-202ENST00000461624 PLEKHG1Q9ULL1 1385 aa8.64□□□□□ -1.03
SPTA1-202ENST00000461624 H3BM21 787 aa8.64□□□□□ -1.03
SPTA1-202ENST00000461624 ZIC2O95409 532 aaPredicted RBP8.64□□□□□ -1.03
SPTA1-202ENST00000461624 NR3C2P08235 984 aa8.64□□□□□ -1.03
SPTA1-202ENST00000461624 IDI1Q13907 227 aa8.64□□□□□ -1.03
SPTA1-202ENST00000461624 IRF7Q92985 503 aa8.64□□□□□ -1.03
SPTA1-202ENST00000461624 PURBQ96QR8 312 aaKnown RBP8.64□□□□□ -1.03
SPTA1-202ENST00000461624 POLR3EQ9NVU0 708 aa8.64□□□□□ -1.03
SPTA1-202ENST00000461624 MYO5BQ9ULV0 1848 aa8.64□□□□□ -1.03
SPTA1-202ENST00000461624 NOS1P29475 1434 aa8.63□□□□□ -1.03
SPTA1-202ENST00000461624 MST1RQ04912 1400 aa8.63□□□□□ -1.03
SPTA1-202ENST00000461624 SH3D19Q5HYK7 790 aa8.63□□□□□ -1.03
SPTA1-202ENST00000461624 ITPKCQ96DU7 683 aa8.63□□□□□ -1.03
SPTA1-202ENST00000461624 NGLY1Q96IV0 654 aa8.63□□□□□ -1.03
SPTA1-202ENST00000461624 UTRNP46939 3433 aa8.63□□□□□ -1.03
SPTA1-202ENST00000461624 LMTK2Q8IWU2 1503 aa8.63□□□□□ -1.03
SPTA1-202ENST00000461624 BLMP54132 1417 aaPredicted RBP8.63□□□□□ -1.03
SPTA1-202ENST00000461624 ADAMTS13Q76LX8 1427 aa8.63□□□□□ -1.03
SPTA1-202ENST00000461624 SKIV2LQ15477 1246 aaKnown RBP8.62□□□□□ -1.03
SPTA1-202ENST00000461624 DDRGK1Q96HY6 314 aa8.62□□□□□ -1.03
SPTA1-202ENST00000461624 KDM4CQ9H3R0 1056 aa8.62□□□□□ -1.03
SPTA1-202ENST00000461624 C19orf44Q9H6X5 657 aa8.62□□□□□ -1.03
SPTA1-202ENST00000461624 ZFAND3Q9H8U3 227 aa8.62□□□□□ -1.03
SPTA1-202ENST00000461624 DUOX2Q9NRD8 1548 aa8.62□□□□□ -1.03
SPTA1-202ENST00000461624 UNC13BO14795 1591 aa8.61□□□□□ -1.03
SPTA1-202ENST00000461624 FSHRP23945 695 aa8.61□□□□□ -1.03
SPTA1-202ENST00000461624 BRPF1P55201 1214 aaPredicted RBP8.61□□□□□ -1.03
SPTA1-202ENST00000461624 VASH1Q7L8A9 365 aaPredicted RBP8.61□□□□□ -1.03
SPTA1-202ENST00000461624 FNBP4Q8N3X1 1017 aaPredicted RBP8.61□□□□□ -1.03
SPTA1-202ENST00000461624 SPHKAPQ2M3C7 1700 aa8.6□□□□□ -1.03
SPTA1-202ENST00000461624 XRN1Q8IZH2 1706 aaKnown RBP8.6□□□□□ -1.03
SPTA1-202ENST00000461624 ZC3H4Q9UPT8 1303 aaKnown RBP8.6□□□□□ -1.03
SPTA1-202ENST00000461624 MAGEB6P1A0A0J9YX57 407 aa8.6□□□□□ -1.03
SPTA1-202ENST00000461624 CTDSPL2Q05D32 466 aa8.6□□□□□ -1.03
SPTA1-202ENST00000461624 MEIOBQ8N635 442 aa8.6□□□□□ -1.03
SPTA1-202ENST00000461624 GPBP1L1Q9HC44 474 aaPredicted RBP8.6□□□□□ -1.03
SPTA1-202ENST00000461624 COL22A1Q8NFW1 1626 aaPredicted RBP8.6□□□□□ -1.03
SPTA1-202ENST00000461624 PIK3R4Q99570 1358 aa8.6□□□□□ -1.03
SPTA1-202ENST00000461624 TRPM2O94759 1503 aa8.59□□□□□ -1.03
SPTA1-202ENST00000461624 BRWD3Q6RI45 1802 aa8.59□□□□□ -1.03
SPTA1-202ENST00000461624 TMEM131LA2VDJ0 1609 aa8.59□□□□□ -1.03
SPTA1-202ENST00000461624 UPP2O95045 317 aa8.59□□□□□ -1.03
SPTA1-202ENST00000461624 ATF3P18847 181 aa8.59□□□□□ -1.03
SPTA1-202ENST00000461624 PPP2R2DQ66LE6 453 aa8.59□□□□□ -1.03
SPTA1-202ENST00000461624 PDXDC2PQ6P474 469 aa8.59□□□□□ -1.03
SPTA1-202ENST00000461624 LINC00528Q8N1L1 170 aa8.59□□□□□ -1.03
SPTA1-202ENST00000461624 LRRC59Q96AG4 307 aaKnown RBP8.59□□□□□ -1.03
SPTA1-202ENST00000461624 TRPC5Q9UL62 973 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 717.6 ms