RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 LMNB1P20700 586 aa16.37■□□□□ 0.21
HCFC1-204ENST00000461098 SOS1Q07889 1333 aaPredicted RBP16.37■□□□□ 0.21
HCFC1-204ENST00000461098 CCDC88AQ3V6T2 1871 aa16.37■□□□□ 0.21
HCFC1-204ENST00000461098 TIAM2Q8IVF5 1701 aa16.36■□□□□ 0.21
HCFC1-204ENST00000461098 NFIXQ14938 502 aa16.36■□□□□ 0.21
HCFC1-204ENST00000461098 DNAJC10Q8IXB1 793 aa16.36■□□□□ 0.21
HCFC1-204ENST00000461098 BCL2L12Q9HB09 334 aa16.36■□□□□ 0.21
HCFC1-204ENST00000461098 NFKBIEO00221 500 aa16.35■□□□□ 0.21
HCFC1-204ENST00000461098 CYP19A1P11511 503 aaPredicted RBP16.35■□□□□ 0.21
HCFC1-204ENST00000461098 ZPR1O75312 459 aa16.34■□□□□ 0.21
HCFC1-204ENST00000461098 C1orf141Q5JVX7 400 aa16.34■□□□□ 0.21
HCFC1-204ENST00000461098 NARFQ9UHQ1 456 aa16.34■□□□□ 0.21
HCFC1-204ENST00000461098 CARMIL3Q8ND23 1372 aa16.33■□□□□ 0.2
HCFC1-204ENST00000461098 SERPINB2P05120 415 aa16.32■□□□□ 0.2
HCFC1-204ENST00000461098 SULT6B1Q6IMI4 303 aa16.32■□□□□ 0.2
HCFC1-204ENST00000461098 TTLL6Q8N841 843 aa16.32■□□□□ 0.2
HCFC1-204ENST00000461098 SLC52A2Q9HAB3 445 aa16.32■□□□□ 0.2
HCFC1-204ENST00000461098 LGR6Q9HBX8 967 aa16.32■□□□□ 0.2
HCFC1-204ENST00000461098 MRC1P22897 1456 aa16.31■□□□□ 0.2
HCFC1-204ENST00000461098 COL15A1P39059 1388 aa16.31■□□□□ 0.2
HCFC1-204ENST00000461098 SLC39A6Q13433 755 aa16.31■□□□□ 0.2
HCFC1-204ENST00000461098 ZBTB1Q9Y2K1 713 aa16.31■□□□□ 0.2
HCFC1-204ENST00000461098 IL13P35225 146 aa16.3■□□□□ 0.2
HCFC1-204ENST00000461098 C2CD5Q86YS7 1000 aa16.3■□□□□ 0.2
HCFC1-204ENST00000461098 ANKRD31Q8N7Z5 1873 aa16.3■□□□□ 0.2
HCFC1-204ENST00000461098 AKAP4Q5JQC9 854 aa16.29■□□□□ 0.2
HCFC1-204ENST00000461098 PANK3Q9H999 370 aa16.29■□□□□ 0.2
HCFC1-204ENST00000461098 DICER1Q9UPY3 1922 aaKnown RBP16.29■□□□□ 0.2
HCFC1-204ENST00000461098 FER1L6Q2WGJ9 1857 aa16.29■□□□□ 0.2
HCFC1-204ENST00000461098 VIRMAQ69YN4 1812 aaKnown RBP16.29■□□□□ 0.2
HCFC1-204ENST00000461098 H0YIN7 160 aa16.27■□□□□ 0.2
HCFC1-204ENST00000461098 RNMTO43148 476 aaKnown RBP16.27■□□□□ 0.2
HCFC1-204ENST00000461098 POTEIP0CG38 1075 aa16.27■□□□□ 0.2
HCFC1-204ENST00000461098 POTEJP0CG39 1038 aa16.27■□□□□ 0.2
HCFC1-204ENST00000461098 UBR2Q8IWV8 1755 aa16.26■□□□□ 0.19
HCFC1-204ENST00000461098 COL11A2P13942 1736 aaPredicted RBP16.26■□□□□ 0.19
HCFC1-204ENST00000461098 POLR3GLQ9BT43 218 aa16.26■□□□□ 0.19
HCFC1-204ENST00000461098 CREBZFQ9NS37 354 aa16.26■□□□□ 0.19
HCFC1-204ENST00000461098 EIF5P55010 431 aaKnown RBP16.25■□□□□ 0.19
HCFC1-204ENST00000461098 DPY19L2Q6NUT2 758 aa16.25■□□□□ 0.19
HCFC1-204ENST00000461098 VSIG10Q8N0Z9 540 aa16.25■□□□□ 0.19
HCFC1-204ENST00000461098 MKRN1Q9UHC7 482 aaKnown RBP16.25■□□□□ 0.19
HCFC1-204ENST00000461098 C21orf2O43822 256 aa16.24■□□□□ 0.19
HCFC1-204ENST00000461098 ERFEQ4G0M1 354 aa16.24■□□□□ 0.19
HCFC1-204ENST00000461098 TBC1D9BQ66K14 1250 aa16.24■□□□□ 0.19
HCFC1-204ENST00000461098 CHADLQ6NUI6 762 aa16.24■□□□□ 0.19
HCFC1-204ENST00000461098 MORC1Q86VD1 984 aa16.24■□□□□ 0.19
HCFC1-204ENST00000461098 FOXN1O15353 648 aa16.23■□□□□ 0.19
HCFC1-204ENST00000461098 CANXP27824 592 aaKnown RBP16.23■□□□□ 0.19
HCFC1-204ENST00000461098 BICDL1Q6ZP65 573 aa16.23■□□□□ 0.19
HCFC1-204ENST00000461098 LTBP3Q9NS15 1303 aa16.22■□□□□ 0.19
HCFC1-204ENST00000461098 DDNO94850 711 aaPredicted RBP16.22■□□□□ 0.19
HCFC1-204ENST00000461098 PRR5LQ6MZQ0 368 aa16.22■□□□□ 0.19
HCFC1-204ENST00000461098 CCDC24Q8N4L8 307 aa16.22■□□□□ 0.19
HCFC1-204ENST00000461098 ZNF622Q969S3 477 aaKnown RBP eCLIP16.22■□□□□ 0.19
HCFC1-204ENST00000461098 BRIP1Q9BX63 1249 aa16.22■□□□□ 0.19
HCFC1-204ENST00000461098 ZNF219Q9P2Y4 722 aaPredicted RBP16.22■□□□□ 0.19
HCFC1-204ENST00000461098 SLX4Q8IY92 1834 aa16.22■□□□□ 0.19
HCFC1-204ENST00000461098 PASKQ96RG2 1323 aa16.21■□□□□ 0.19
HCFC1-204ENST00000461098 SCN7AQ01118 1682 aa16.21■□□□□ 0.19
HCFC1-204ENST00000461098 MTHFSDQ2M296 383 aaKnown RBP16.21■□□□□ 0.19
HCFC1-204ENST00000461098 CNTNAP1P78357 1384 aa16.21■□□□□ 0.19
HCFC1-204ENST00000461098 PDE6BP35913 854 aa16.2■□□□□ 0.18
HCFC1-204ENST00000461098 TIMELESSQ9UNS1 1208 aa16.2■□□□□ 0.18
HCFC1-204ENST00000461098 HMOX1P09601 288 aa16.19■□□□□ 0.18
HCFC1-204ENST00000461098 PRDM10Q9NQV6 1147 aa16.19■□□□□ 0.18
HCFC1-204ENST00000461098 PDZRN3Q9UPQ7 1066 aa16.19■□□□□ 0.18
HCFC1-204ENST00000461098 TAOK3Q9H2K8 898 aa16.18■□□□□ 0.18
HCFC1-204ENST00000461098 TBC1D2BQ9UPU7 963 aa16.18■□□□□ 0.18
HCFC1-204ENST00000461098 ARFGEF2Q9Y6D5 1785 aa16.18■□□□□ 0.18
HCFC1-204ENST00000461098 CACNA1SQ13698 1873 aa16.17■□□□□ 0.18
HCFC1-204ENST00000461098 A0A087WZG4 1122 aa16.17■□□□□ 0.18
HCFC1-204ENST00000461098 STARD3NLO95772 234 aa16.17■□□□□ 0.18
HCFC1-204ENST00000461098 ITGBL1O95965 494 aaPredicted RBP16.17■□□□□ 0.18
HCFC1-204ENST00000461098 SRGNP10124 158 aa16.17■□□□□ 0.18
HCFC1-204ENST00000461098 HSPA5P11021 654 aaKnown RBP16.17■□□□□ 0.18
HCFC1-204ENST00000461098 C7orf43Q8WVR3 580 aa16.17■□□□□ 0.18
HCFC1-204ENST00000461098 ZNF496Q96IT1 587 aaPredicted RBP16.17■□□□□ 0.18
HCFC1-204ENST00000461098 L3MBTL3Q96JM7 780 aaPredicted RBP16.17■□□□□ 0.18
HCFC1-204ENST00000461098 VEGFBP49765 207 aa16.16■□□□□ 0.18
HCFC1-204ENST00000461098 AMER1Q5JTC6 1135 aaPredicted RBP16.16■□□□□ 0.18
HCFC1-204ENST00000461098 PRPF40BQ6NWY9 871 aaKnown RBP16.16■□□□□ 0.18
HCFC1-204ENST00000461098 TAF1DQ9H5J8 278 aaPredicted RBP16.16■□□□□ 0.18
HCFC1-204ENST00000461098 SCN4AP35499 1836 aa16.16■□□□□ 0.18
HCFC1-204ENST00000461098 ADAMTSL1Q8N6G6 1762 aa16.15■□□□□ 0.18
HCFC1-204ENST00000461098 CAMTA2O94983 1202 aa16.15■□□□□ 0.18
HCFC1-204ENST00000461098 STYK1Q6J9G0 422 aa16.15■□□□□ 0.18
HCFC1-204ENST00000461098 LDHDQ86WU2 507 aa16.15■□□□□ 0.18
HCFC1-204ENST00000461098 WBP1LQ9NX94 342 aa16.15■□□□□ 0.18
HCFC1-204ENST00000461098 SIPA1L3O60292 1781 aaPredicted RBP16.15■□□□□ 0.18
HCFC1-204ENST00000461098 HEG1Q9ULI3 1381 aa16.14■□□□□ 0.17
HCFC1-204ENST00000461098 IL6STP40189 918 aaPredicted RBP16.14■□□□□ 0.17
HCFC1-204ENST00000461098 IL17REQ8NFR9 667 aa16.14■□□□□ 0.17
HCFC1-204ENST00000461098 CNKSR1Q969H4 720 aa16.14■□□□□ 0.17
HCFC1-204ENST00000461098 TMEM88BA6NKF7 163 aa16.13■□□□□ 0.17
HCFC1-204ENST00000461098 CTCFP49711 727 aaPredicted RBP16.13■□□□□ 0.17
HCFC1-204ENST00000461098 EIF4G2P78344 907 aaKnown RBP eCLIP16.13■□□□□ 0.17
HCFC1-204ENST00000461098 ZNF790Q6PG37 636 aa16.13■□□□□ 0.17
HCFC1-204ENST00000461098 TTC5Q8N0Z6 440 aa16.13■□□□□ 0.17
HCFC1-204ENST00000461098 MASTLQ96GX5 879 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms