RNA–Protein interactions for RNA: ENST00000458258.5

PTBP3-207, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene PTBP3, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-207ENST00000458258 ZBTB1Q9Y2K1 713 aa7.17□□□□□ -1.26
PTBP3-207ENST00000458258 SDSP20132 328 aa7.16□□□□□ -1.26
PTBP3-207ENST00000458258 HDAC1Q13547 482 aaPredicted RBP7.16□□□□□ -1.26
PTBP3-207ENST00000458258 DCTPP1Q9H773 170 aa7.16□□□□□ -1.26
PTBP3-207ENST00000458258 SEC62Q99442 399 aaKnown RBP7.16□□□□□ -1.26
PTBP3-207ENST00000458258 RWDD1Q9H446 243 aaPredicted RBP7.16□□□□□ -1.26
PTBP3-207ENST00000458258 RBAK-RBAKDNI3L0D1 243 aa7.16□□□□□ -1.26
PTBP3-207ENST00000458258 PLEKHO1Q53GL0 409 aaPredicted RBP7.16□□□□□ -1.26
PTBP3-207ENST00000458258 C3orf67Q6ZVT6 689 aa7.16□□□□□ -1.26
PTBP3-207ENST00000458258 NOP58Q9Y2X3 529 aaKnown RBP7.16□□□□□ -1.26
PTBP3-207ENST00000458258 HSP90AB3PQ58FF7 597 aa7.15□□□□□ -1.26
PTBP3-207ENST00000458258 FAM98CQ17RN3 349 aaKnown RBP7.15□□□□□ -1.26
PTBP3-207ENST00000458258 EAF2Q96CJ1 260 aaPredicted RBP7.15□□□□□ -1.26
PTBP3-207ENST00000458258 WDR17Q8IZU2 1322 aa7.15□□□□□ -1.26
PTBP3-207ENST00000458258 SALL3Q9BXA9 1300 aa7.15□□□□□ -1.26
PTBP3-207ENST00000458258 DNAAF4Q8WXU2 420 aa7.15□□□□□ -1.26
PTBP3-207ENST00000458258 SURF6O75683 361 aaKnown RBP7.15□□□□□ -1.26
PTBP3-207ENST00000458258 ATG3Q9NT62 314 aa7.15□□□□□ -1.26
PTBP3-207ENST00000458258 KIF16BQ96L93 1317 aa7.15□□□□□ -1.26
PTBP3-207ENST00000458258 LRRC24Q50LG9 513 aa7.15□□□□□ -1.27
PTBP3-207ENST00000458258 TNS3Q68CZ2 1445 aa7.15□□□□□ -1.27
PTBP3-207ENST00000458258 SRGAP3O43295 1099 aa7.14□□□□□ -1.27
PTBP3-207ENST00000458258 TATP17735 454 aaPredicted RBP7.14□□□□□ -1.27
PTBP3-207ENST00000458258 C1orf141Q5JVX7 400 aa7.14□□□□□ -1.27
PTBP3-207ENST00000458258 ZCRB1Q8TBF4 217 aaKnown RBP7.14□□□□□ -1.27
PTBP3-207ENST00000458258 DENND2AQ9ULE3 1009 aa7.14□□□□□ -1.27
PTBP3-207ENST00000458258 FAM89AQ96GI7 184 aa7.14□□□□□ -1.27
PTBP3-207ENST00000458258 C8orf37Q96NL8 207 aa7.14□□□□□ -1.27
PTBP3-207ENST00000458258 UPF3BQ9BZI7 483 aaKnown RBP7.14□□□□□ -1.27
PTBP3-207ENST00000458258 HELBQ8NG08 1087 aaPredicted RBP7.14□□□□□ -1.27
PTBP3-207ENST00000458258 API5Q9BZZ5 524 aaKnown RBP7.14□□□□□ -1.27
PTBP3-207ENST00000458258 FOXD4L5Q5VV16 416 aaPredicted RBP7.14□□□□□ -1.27
PTBP3-207ENST00000458258 IFNL2Q8IZJ0 200 aa7.14□□□□□ -1.27
PTBP3-207ENST00000458258 FOXD4L4Q8WXT5 416 aaPredicted RBP7.14□□□□□ -1.27
PTBP3-207ENST00000458258 HEG1Q9ULI3 1381 aa7.14□□□□□ -1.27
PTBP3-207ENST00000458258 RASEFQ8IZ41 740 aa7.14□□□□□ -1.27
PTBP3-207ENST00000458258 BICC1Q9H694 974 aaKnown RBP7.14□□□□□ -1.27
PTBP3-207ENST00000458258 ANTXR1Q9H6X2 564 aa7.14□□□□□ -1.27
PTBP3-207ENST00000458258 BRPF1P55201 1214 aaPredicted RBP7.14□□□□□ -1.27
PTBP3-207ENST00000458258 ITPK1Q13572 414 aa7.14□□□□□ -1.27
PTBP3-207ENST00000458258 ARHGAP45Q92619 1136 aa7.14□□□□□ -1.27
PTBP3-207ENST00000458258 TOPAZ1Q8N9V7 1692 aa7.13□□□□□ -1.27
PTBP3-207ENST00000458258 TIMM10P62072 90 aa7.13□□□□□ -1.27
PTBP3-207ENST00000458258 UBE3BQ7Z3V4 1068 aa7.13□□□□□ -1.27
PTBP3-207ENST00000458258 STK31Q9BXU1 1019 aa7.13□□□□□ -1.27
PTBP3-207ENST00000458258 SRCIN1Q9C0H9 1055 aa7.13□□□□□ -1.27
PTBP3-207ENST00000458258 UBAP1LF5GYI3 381 aa7.13□□□□□ -1.27
PTBP3-207ENST00000458258 CABP4P57796 275 aa7.13□□□□□ -1.27
PTBP3-207ENST00000458258 SPG7Q9UQ90 795 aa7.13□□□□□ -1.27
PTBP3-207ENST00000458258 EVA1CP58658 441 aa7.13□□□□□ -1.27
PTBP3-207ENST00000458258 SNRKQ9NRH2 765 aa7.13□□□□□ -1.27
PTBP3-207ENST00000458258 PDE1AP54750 535 aa7.12□□□□□ -1.27
PTBP3-207ENST00000458258 EVX2Q03828 476 aa7.12□□□□□ -1.27
PTBP3-207ENST00000458258 TPRNQ4KMQ1 711 aa7.12□□□□□ -1.27
PTBP3-207ENST00000458258 ATP8B2P98198 1209 aa7.12□□□□□ -1.27
PTBP3-207ENST00000458258 ZGPATQ8N5A5 531 aaKnown RBP7.12□□□□□ -1.27
PTBP3-207ENST00000458258 SCARF1Q14162 830 aa7.12□□□□□ -1.27
PTBP3-207ENST00000458258 CCDC129Q6ZRS4 1044 aa7.12□□□□□ -1.27
PTBP3-207ENST00000458258 WWC3Q9ULE0 1092 aa7.12□□□□□ -1.27
PTBP3-207ENST00000458258 HSPA1LP34931 641 aa7.12□□□□□ -1.27
PTBP3-207ENST00000458258 CASP7P55210 303 aa7.12□□□□□ -1.27
PTBP3-207ENST00000458258 IPO8O15397 1037 aaKnown RBP7.12□□□□□ -1.27
PTBP3-207ENST00000458258 LMOD3Q0VAK6 560 aa7.12□□□□□ -1.27
PTBP3-207ENST00000458258 FOXD4L6Q3SYB3 417 aaPredicted RBP7.12□□□□□ -1.27
PTBP3-207ENST00000458258 CCDC30Q5VVM6 783 aa7.12□□□□□ -1.27
PTBP3-207ENST00000458258 FOXD4L3Q6VB84 417 aaPredicted RBP7.12□□□□□ -1.27
PTBP3-207ENST00000458258 TBC1D32Q96NH3 1257 aa7.12□□□□□ -1.27
PTBP3-207ENST00000458258 MS4A1P11836 297 aa7.12□□□□□ -1.27
PTBP3-207ENST00000458258 ZBTB47Q9UFB7 747 aaPredicted RBP7.12□□□□□ -1.27
PTBP3-207ENST00000458258 MARF1Q9Y4F3 1742 aaKnown RBP7.11□□□□□ -1.27
PTBP3-207ENST00000458258 LMBR1LQ6UX01 489 aa7.11□□□□□ -1.27
PTBP3-207ENST00000458258 KNDC1Q76NI1 1749 aa7.11□□□□□ -1.27
PTBP3-207ENST00000458258 RFX5P48382 616 aaPredicted RBP7.11□□□□□ -1.27
PTBP3-207ENST00000458258 NCOA3Q9Y6Q9 1424 aa7.11□□□□□ -1.27
PTBP3-207ENST00000458258 COL5A2P05997 1499 aaPredicted RBP7.11□□□□□ -1.27
PTBP3-207ENST00000458258 RHPN1Q8TCX5 695 aa7.11□□□□□ -1.27
PTBP3-207ENST00000458258 RILPL2Q969X0 211 aa7.11□□□□□ -1.27
PTBP3-207ENST00000458258 LARGE1O95461 756 aa7.11□□□□□ -1.27
PTBP3-207ENST00000458258 PTH1RQ03431 593 aa7.11□□□□□ -1.27
PTBP3-207ENST00000458258 DBNDD2Q9BQY9 259 aa7.11□□□□□ -1.27
PTBP3-207ENST00000458258 IL2RBP14784 551 aa7.11□□□□□ -1.27
PTBP3-207ENST00000458258 FAM227BQ96M60 508 aa7.11□□□□□ -1.27
PTBP3-207ENST00000458258 DDX21Q9NR30 783 aaKnown RBP eCLIP7.11□□□□□ -1.27
PTBP3-207ENST00000458258 SLURP2P0DP57 97 aa7.1□□□□□ -1.27
PTBP3-207ENST00000458258 PDGFDQ9GZP0 370 aaPredicted RBP7.1□□□□□ -1.27
PTBP3-207ENST00000458258 SRP68Q9UHB9 627 aaKnown RBP7.1□□□□□ -1.27
PTBP3-207ENST00000458258 UBTFL1P0CB47 393 aaPredicted RBP7.1□□□□□ -1.27
PTBP3-207ENST00000458258 PTPN12Q05209 780 aaKnown RBP7.1□□□□□ -1.27
PTBP3-207ENST00000458258 GPHNQ9NQX3 736 aaPredicted RBP7.1□□□□□ -1.27
PTBP3-207ENST00000458258 NCAPD2Q15021 1401 aa7.1□□□□□ -1.27
PTBP3-207ENST00000458258 MYT1Q01538 1121 aa7.1□□□□□ -1.27
PTBP3-207ENST00000458258 GCKRQ14397 625 aa7.1□□□□□ -1.27
PTBP3-207ENST00000458258 PI4K2BQ8TCG2 481 aa7.1□□□□□ -1.27
PTBP3-207ENST00000458258 C22orf23Q9BZE7 217 aa7.1□□□□□ -1.27
PTBP3-207ENST00000458258 TTC22Q5TAA0 569 aa7.1□□□□□ -1.27
PTBP3-207ENST00000458258 BICDL1Q6ZP65 573 aa7.1□□□□□ -1.27
PTBP3-207ENST00000458258 RIC3Q7Z5B4 369 aa7.1□□□□□ -1.27
PTBP3-207ENST00000458258 SSH3Q8TE77 659 aa7.1□□□□□ -1.27
PTBP3-207ENST00000458258 SEC31BQ9NQW1 1179 aa7.1□□□□□ -1.27
PTBP3-207ENST00000458258 MON2Q7Z3U7 1717 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms