RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 NUTM2EB1AL46 878 aaPredicted RBP20.39■□□□□ 0.86
MBD1-210ENST00000457839 NBPF7P0C2Y1 421 aaPredicted RBP20.39■□□□□ 0.86
MBD1-210ENST00000457839 NUTM2AQ8IVF1 878 aaPredicted RBP20.39■□□□□ 0.86
MBD1-210ENST00000457839 PARP4Q9UKK3 1724 aaKnown RBP20.39■□□□□ 0.86
MBD1-210ENST00000457839 AHDC1Q5TGY3 1603 aaPredicted RBP20.39■□□□□ 0.85
MBD1-210ENST00000457839 UBTFL1P0CB47 393 aaPredicted RBP20.39■□□□□ 0.85
MBD1-210ENST00000457839 DDX21Q9NR30 783 aaKnown RBP eCLIP20.39■□□□□ 0.85
MBD1-210ENST00000457839 OTUD7AQ8TE49 926 aaPredicted RBP20.38■□□□□ 0.85
MBD1-210ENST00000457839 MRC1P22897 1456 aa20.38■□□□□ 0.85
MBD1-210ENST00000457839 FMNL2Q96PY5 1086 aa20.38■□□□□ 0.85
MBD1-210ENST00000457839 HYPKQ9NX55 129 aa20.38■□□□□ 0.85
MBD1-210ENST00000457839 EXOC6BQ9Y2D4 811 aa20.38■□□□□ 0.85
MBD1-210ENST00000457839 C5P01031 1676 aa20.38■□□□□ 0.85
MBD1-210ENST00000457839 PTCD1O75127 700 aaKnown RBP20.37■□□□□ 0.85
MBD1-210ENST00000457839 SNRPA1P09661 255 aaKnown RBP20.37■□□□□ 0.85
MBD1-210ENST00000457839 CWF19L2Q2TBE0 894 aaKnown RBP20.37■□□□□ 0.85
MBD1-210ENST00000457839 PLEKHG2Q9H7P9 1386 aa20.37■□□□□ 0.85
MBD1-210ENST00000457839 KSR2Q6VAB6 950 aa20.36■□□□□ 0.85
MBD1-210ENST00000457839 PXDNLA1KZ92 1463 aa20.36■□□□□ 0.85
MBD1-210ENST00000457839 HMMRO75330 724 aa20.35■□□□□ 0.85
MBD1-210ENST00000457839 NKX1-1Q15270 411 aaPredicted RBP20.35■□□□□ 0.85
MBD1-210ENST00000457839 COPS6Q7L5N1 327 aa20.35■□□□□ 0.85
MBD1-210ENST00000457839 XAGE3Q8WTP9 111 aa20.35■□□□□ 0.85
MBD1-210ENST00000457839 ERVV-2B6SEH9 535 aa20.34■□□□□ 0.85
MBD1-210ENST00000457839 COL16A1Q07092 1604 aaPredicted RBP20.34■□□□□ 0.85
MBD1-210ENST00000457839 TOM1O60784 492 aa20.34■□□□□ 0.85
MBD1-210ENST00000457839 ATP8B2P98198 1209 aa20.34■□□□□ 0.85
MBD1-210ENST00000457839 ZBTB47Q9UFB7 747 aaPredicted RBP20.34■□□□□ 0.85
MBD1-210ENST00000457839 NOP58Q9Y2X3 529 aaKnown RBP20.34■□□□□ 0.85
MBD1-210ENST00000457839 PLEKHM2Q8IWE5 1019 aa20.33■□□□□ 0.85
MBD1-210ENST00000457839 SHANK3Q9BYB0 1731 aa20.33■□□□□ 0.85
MBD1-210ENST00000457839 PHLPP1O60346 1717 aa20.33■□□□□ 0.84
MBD1-210ENST00000457839 RIC3Q7Z5B4 369 aa20.32■□□□□ 0.84
MBD1-210ENST00000457839 UBAP1LF5GYI3 381 aa20.32■□□□□ 0.84
MBD1-210ENST00000457839 SLC4A3P48751 1232 aa20.32■□□□□ 0.84
MBD1-210ENST00000457839 PPP1R42Q7Z4L9 355 aa20.31■□□□□ 0.84
MBD1-210ENST00000457839 KAT6BQ8WYB5 2073 aa20.31■□□□□ 0.84
MBD1-210ENST00000457839 COL14A1Q05707 1796 aaKnown RBP20.31■□□□□ 0.84
MBD1-210ENST00000457839 LRP10Q7Z4F1 713 aa20.31■□□□□ 0.84
MBD1-210ENST00000457839 C9orf78Q9NZ63 289 aaPredicted RBP20.31■□□□□ 0.84
MBD1-210ENST00000457839 DDX58O95786 925 aaKnown RBP20.3■□□□□ 0.84
MBD1-210ENST00000457839 MFAP1P55081 439 aaKnown RBP20.3■□□□□ 0.84
MBD1-210ENST00000457839 COL22A1Q8NFW1 1626 aaPredicted RBP20.3■□□□□ 0.84
MBD1-210ENST00000457839 BMP2KLQ5H9B9 411 aa20.3■□□□□ 0.84
MBD1-210ENST00000457839 TMOD3Q9NYL9 352 aa20.3■□□□□ 0.84
MBD1-210ENST00000457839 N4BP2Q86UW6 1770 aaPredicted RBP20.29■□□□□ 0.84
MBD1-210ENST00000457839 GSPT1P15170 499 aaKnown RBP20.29■□□□□ 0.84
MBD1-210ENST00000457839 ASAP1Q9ULH1 1129 aa20.29■□□□□ 0.84
MBD1-210ENST00000457839 SRGAP3O43295 1099 aa20.29■□□□□ 0.84
MBD1-210ENST00000457839 A1BGP04217 495 aa20.29■□□□□ 0.84
MBD1-210ENST00000457839 IGKV5-2P06315 115 aa20.29■□□□□ 0.84
MBD1-210ENST00000457839 NBPF26B4DH59 902 aa20.28■□□□□ 0.84
MBD1-210ENST00000457839 NBPF14Q5TI25 921 aa20.28■□□□□ 0.84
MBD1-210ENST00000457839 NBPF10Q6P3W6 841 aaKnown RBP20.28■□□□□ 0.84
MBD1-210ENST00000457839 NBPF15Q8N660 670 aa20.28■□□□□ 0.84
MBD1-210ENST00000457839 PIGBQ92521 554 aa20.28■□□□□ 0.84
MBD1-210ENST00000457839 TSHZ3Q63HK5 1081 aa20.28■□□□□ 0.84
MBD1-210ENST00000457839 GLI3P10071 1580 aa20.27■□□□□ 0.84
MBD1-210ENST00000457839 ANKRD13DQ6ZTN6 518 aa20.27■□□□□ 0.84
MBD1-210ENST00000457839 LINS1Q8NG48 757 aa20.27■□□□□ 0.84
MBD1-210ENST00000457839 JARID2Q92833 1246 aaPredicted RBP20.27■□□□□ 0.84
MBD1-210ENST00000457839 MYD88Q99836 296 aa20.27■□□□□ 0.84
MBD1-210ENST00000457839 SYTL4Q96C24 671 aaPredicted RBP20.27■□□□□ 0.83
MBD1-210ENST00000457839 DISP2A7MBM2 1401 aa20.26■□□□□ 0.83
MBD1-210ENST00000457839 EXOC5O00471 708 aa20.26■□□□□ 0.83
MBD1-210ENST00000457839 ALDH1L1O75891 902 aa20.26■□□□□ 0.83
MBD1-210ENST00000457839 SSH3Q8TE77 659 aa20.26■□□□□ 0.83
MBD1-210ENST00000457839 TOGARAM1Q9Y4F4 1720 aa20.26■□□□□ 0.83
MBD1-210ENST00000457839 UPF2Q9HAU5 1272 aaKnown RBP20.26■□□□□ 0.83
MBD1-210ENST00000457839 CCDC9Q9Y3X0 531 aaKnown RBP20.26■□□□□ 0.83
MBD1-210ENST00000457839 SURF6O75683 361 aaKnown RBP20.25■□□□□ 0.83
MBD1-210ENST00000457839 LRRCC1Q9C099 1032 aa20.25■□□□□ 0.83
MBD1-210ENST00000457839 IL1RAPL2Q9NP60 686 aa20.25■□□□□ 0.83
MBD1-210ENST00000457839 ATP5J2-PTCD1G3V325 749 aa20.25■□□□□ 0.83
MBD1-210ENST00000457839 KCPQ6ZWJ8 1503 aa20.24■□□□□ 0.83
MBD1-210ENST00000457839 GRM8O00222 908 aa20.24■□□□□ 0.83
MBD1-210ENST00000457839 TTC22Q5TAA0 569 aa20.24■□□□□ 0.83
MBD1-210ENST00000457839 TBC1D32Q96NH3 1257 aa20.24■□□□□ 0.83
MBD1-210ENST00000457839 IBTKQ9P2D0 1353 aaPredicted RBP20.23■□□□□ 0.83
MBD1-210ENST00000457839 A0A0G2JS52 829 aa20.23■□□□□ 0.83
MBD1-210ENST00000457839 NEURL1BA8MQ27 555 aa20.23■□□□□ 0.83
MBD1-210ENST00000457839 NEXNQ0ZGT2 675 aa20.23■□□□□ 0.83
MBD1-210ENST00000457839 POLA2Q14181 598 aa20.23■□□□□ 0.83
MBD1-210ENST00000457839 TBC1D9Q6ZT07 1266 aa20.23■□□□□ 0.83
MBD1-210ENST00000457839 TTLL7Q6ZT98 887 aa20.23■□□□□ 0.83
MBD1-210ENST00000457839 SUCLG2Q96I99 432 aa20.23■□□□□ 0.83
MBD1-210ENST00000457839 METTL22Q9BUU2 404 aaPredicted RBP20.23■□□□□ 0.83
MBD1-210ENST00000457839 ZNF330Q9Y3S2 320 aaPredicted RBP20.23■□□□□ 0.83
MBD1-210ENST00000457839 SPATA31A1Q5TZJ5 1347 aa20.23■□□□□ 0.83
MBD1-210ENST00000457839 DDRGK1Q96HY6 314 aa20.22■□□□□ 0.83
MBD1-210ENST00000457839 KAZALD1Q96I82 304 aa20.22■□□□□ 0.83
MBD1-210ENST00000457839 RBM42Q9BTD8 480 aaKnown RBP20.22■□□□□ 0.83
MBD1-210ENST00000457839 ATG3Q9NT62 314 aa20.22■□□□□ 0.83
MBD1-210ENST00000457839 PLCH1Q4KWH8 1693 aa20.21■□□□□ 0.83
MBD1-210ENST00000457839 BICC1Q9H694 974 aaKnown RBP20.21■□□□□ 0.83
MBD1-210ENST00000457839 PA2G4Q9UQ80 394 aaKnown RBP20.21■□□□□ 0.83
MBD1-210ENST00000457839 PDE1AP54750 535 aa20.2■□□□□ 0.82
MBD1-210ENST00000457839 GCKRQ14397 625 aa20.2■□□□□ 0.82
MBD1-210ENST00000457839 DNAJC10Q8IXB1 793 aa20.2■□□□□ 0.82
MBD1-210ENST00000457839 TNS2Q63HR2 1409 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms