RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 HSPA1BP0DMV9 641 aaKnown RBP23.71■■□□□ 1.39
UBE2D4-209ENST00000454428 VEGFAP15692 232 aaPredicted RBP23.7■■□□□ 1.38
UBE2D4-209ENST00000454428 LMNB1P20700 586 aa23.7■■□□□ 1.38
UBE2D4-209ENST00000454428 NFIXQ14938 502 aa23.7■■□□□ 1.38
UBE2D4-209ENST00000454428 DNAJC10Q8IXB1 793 aa23.7■■□□□ 1.38
UBE2D4-209ENST00000454428 POTECB2RU33 542 aa23.69■■□□□ 1.38
UBE2D4-209ENST00000454428 C1orf141Q5JVX7 400 aa23.69■■□□□ 1.38
UBE2D4-209ENST00000454428 BCL2L12Q9HB09 334 aa23.69■■□□□ 1.38
UBE2D4-209ENST00000454428 NFKBIEO00221 500 aa23.67■■□□□ 1.38
UBE2D4-209ENST00000454428 ZPR1O75312 459 aa23.67■■□□□ 1.38
UBE2D4-209ENST00000454428 CARMIL3Q8ND23 1372 aa23.66■■□□□ 1.38
UBE2D4-209ENST00000454428 CYP19A1P11511 503 aaPredicted RBP23.66■■□□□ 1.38
UBE2D4-209ENST00000454428 NARFQ9UHQ1 456 aa23.66■■□□□ 1.38
UBE2D4-209ENST00000454428 VIRMAQ69YN4 1812 aaKnown RBP23.66■■□□□ 1.38
UBE2D4-209ENST00000454428 MRC1P22897 1456 aa23.65■■□□□ 1.38
UBE2D4-209ENST00000454428 SULT6B1Q6IMI4 303 aa23.65■■□□□ 1.38
UBE2D4-209ENST00000454428 COL15A1P39059 1388 aa23.65■■□□□ 1.38
UBE2D4-209ENST00000454428 SERPINB2P05120 415 aa23.63■■□□□ 1.37
UBE2D4-209ENST00000454428 ANKRD31Q8N7Z5 1873 aa23.63■■□□□ 1.37
UBE2D4-209ENST00000454428 TTLL6Q8N841 843 aa23.63■■□□□ 1.37
UBE2D4-209ENST00000454428 SLC52A2Q9HAB3 445 aa23.63■■□□□ 1.37
UBE2D4-209ENST00000454428 LGR6Q9HBX8 967 aa23.63■■□□□ 1.37
UBE2D4-209ENST00000454428 ZBTB1Q9Y2K1 713 aa23.63■■□□□ 1.37
UBE2D4-209ENST00000454428 POLR3GLQ9BT43 218 aa23.62■■□□□ 1.37
UBE2D4-209ENST00000454428 DICER1Q9UPY3 1922 aaKnown RBP23.62■■□□□ 1.37
UBE2D4-209ENST00000454428 IL13P35225 146 aa23.61■■□□□ 1.37
UBE2D4-209ENST00000454428 SLC39A6Q13433 755 aa23.61■■□□□ 1.37
UBE2D4-209ENST00000454428 C2CD5Q86YS7 1000 aa23.61■■□□□ 1.37
UBE2D4-209ENST00000454428 FER1L6Q2WGJ9 1857 aa23.6■■□□□ 1.37
UBE2D4-209ENST00000454428 AKAP4Q5JQC9 854 aa23.6■■□□□ 1.37
UBE2D4-209ENST00000454428 PANK3Q9H999 370 aa23.6■■□□□ 1.37
UBE2D4-209ENST00000454428 COL11A2P13942 1736 aaPredicted RBP23.59■■□□□ 1.37
UBE2D4-209ENST00000454428 UBR2Q8IWV8 1755 aa23.59■■□□□ 1.37
UBE2D4-209ENST00000454428 H0YIN7 160 aa23.56■■□□□ 1.36
UBE2D4-209ENST00000454428 RNMTO43148 476 aaKnown RBP23.56■■□□□ 1.36
UBE2D4-209ENST00000454428 POTEIP0CG38 1075 aa23.54■■□□□ 1.36
UBE2D4-209ENST00000454428 POTEJP0CG39 1038 aa23.54■■□□□ 1.36
UBE2D4-209ENST00000454428 MORC1Q86VD1 984 aa23.54■■□□□ 1.36
UBE2D4-209ENST00000454428 VSIG10Q8N0Z9 540 aa23.53■■□□□ 1.36
UBE2D4-209ENST00000454428 CREBZFQ9NS37 354 aa23.53■■□□□ 1.36
UBE2D4-209ENST00000454428 SCN7AQ01118 1682 aa23.53■■□□□ 1.36
UBE2D4-209ENST00000454428 CANXP27824 592 aaKnown RBP23.52■■□□□ 1.36
UBE2D4-209ENST00000454428 EIF5P55010 431 aaKnown RBP23.52■■□□□ 1.36
UBE2D4-209ENST00000454428 DPY19L2Q6NUT2 758 aa23.52■■□□□ 1.36
UBE2D4-209ENST00000454428 BICDL1Q6ZP65 573 aa23.52■■□□□ 1.36
UBE2D4-209ENST00000454428 MKRN1Q9UHC7 482 aaKnown RBP23.52■■□□□ 1.36
UBE2D4-209ENST00000454428 C21orf2O43822 256 aa23.51■■□□□ 1.35
UBE2D4-209ENST00000454428 ERFEQ4G0M1 354 aa23.51■■□□□ 1.35
UBE2D4-209ENST00000454428 TBC1D9BQ66K14 1250 aa23.51■■□□□ 1.35
UBE2D4-209ENST00000454428 CHADLQ6NUI6 762 aa23.51■■□□□ 1.35
UBE2D4-209ENST00000454428 CCDC24Q8N4L8 307 aa23.5■■□□□ 1.35
UBE2D4-209ENST00000454428 ZNF219Q9P2Y4 722 aaPredicted RBP23.5■■□□□ 1.35
UBE2D4-209ENST00000454428 SLX4Q8IY92 1834 aa23.49■■□□□ 1.35
UBE2D4-209ENST00000454428 ZNF622Q969S3 477 aaKnown RBP eCLIP23.49■■□□□ 1.35
UBE2D4-209ENST00000454428 CACNA1SQ13698 1873 aa23.49■■□□□ 1.35
UBE2D4-209ENST00000454428 FOXN1O15353 648 aa23.48■■□□□ 1.35
UBE2D4-209ENST00000454428 MTHFSDQ2M296 383 aaKnown RBP23.48■■□□□ 1.35
UBE2D4-209ENST00000454428 PRR5LQ6MZQ0 368 aa23.48■■□□□ 1.35
UBE2D4-209ENST00000454428 BRIP1Q9BX63 1249 aa23.48■■□□□ 1.35
UBE2D4-209ENST00000454428 LTBP3Q9NS15 1303 aa23.48■■□□□ 1.35
UBE2D4-209ENST00000454428 DDNO94850 711 aaPredicted RBP23.47■■□□□ 1.35
UBE2D4-209ENST00000454428 CNTNAP1P78357 1384 aa23.47■■□□□ 1.35
UBE2D4-209ENST00000454428 ARFGEF2Q9Y6D5 1785 aa23.47■■□□□ 1.35
UBE2D4-209ENST00000454428 HMOX1P09601 288 aa23.46■■□□□ 1.35
UBE2D4-209ENST00000454428 PASKQ96RG2 1323 aa23.46■■□□□ 1.35
UBE2D4-209ENST00000454428 TIMELESSQ9UNS1 1208 aa23.46■■□□□ 1.35
UBE2D4-209ENST00000454428 PDE6BP35913 854 aa23.45■■□□□ 1.34
UBE2D4-209ENST00000454428 HSPA5P11021 654 aaKnown RBP23.44■■□□□ 1.34
UBE2D4-209ENST00000454428 TAOK3Q9H2K8 898 aa23.44■■□□□ 1.34
UBE2D4-209ENST00000454428 PDZRN3Q9UPQ7 1066 aa23.44■■□□□ 1.34
UBE2D4-209ENST00000454428 SIPA1L3O60292 1781 aaPredicted RBP23.43■■□□□ 1.34
UBE2D4-209ENST00000454428 A0A087WZG4 1122 aa23.43■■□□□ 1.34
UBE2D4-209ENST00000454428 SCN4AP35499 1836 aa23.43■■□□□ 1.34
UBE2D4-209ENST00000454428 STARD3NLO95772 234 aa23.42■■□□□ 1.34
UBE2D4-209ENST00000454428 ZNF496Q96IT1 587 aaPredicted RBP23.42■■□□□ 1.34
UBE2D4-209ENST00000454428 PRDM10Q9NQV6 1147 aa23.42■■□□□ 1.34
UBE2D4-209ENST00000454428 TBC1D2BQ9UPU7 963 aa23.42■■□□□ 1.34
UBE2D4-209ENST00000454428 AMER1Q5JTC6 1135 aaPredicted RBP23.41■■□□□ 1.34
UBE2D4-209ENST00000454428 BCORQ6W2J9 1755 aa23.41■■□□□ 1.34
UBE2D4-209ENST00000454428 HEG1Q9ULI3 1381 aa23.4■■□□□ 1.34
UBE2D4-209ENST00000454428 SRGNP10124 158 aa23.4■■□□□ 1.34
UBE2D4-209ENST00000454428 PRPF40BQ6NWY9 871 aaKnown RBP23.4■■□□□ 1.34
UBE2D4-209ENST00000454428 ADAMTSL1Q8N6G6 1762 aa23.4■■□□□ 1.34
UBE2D4-209ENST00000454428 VEGFBP49765 207 aa23.39■■□□□ 1.33
UBE2D4-209ENST00000454428 EIF4G2P78344 907 aaKnown RBP eCLIP23.39■■□□□ 1.33
UBE2D4-209ENST00000454428 STYK1Q6J9G0 422 aa23.39■■□□□ 1.33
UBE2D4-209ENST00000454428 LDHDQ86WU2 507 aa23.39■■□□□ 1.33
UBE2D4-209ENST00000454428 L3MBTL3Q96JM7 780 aaPredicted RBP23.39■■□□□ 1.33
UBE2D4-209ENST00000454428 TAF1DQ9H5J8 278 aaPredicted RBP23.39■■□□□ 1.33
UBE2D4-209ENST00000454428 CAMTA2O94983 1202 aa23.38■■□□□ 1.33
UBE2D4-209ENST00000454428 ITGBL1O95965 494 aaPredicted RBP23.38■■□□□ 1.33
UBE2D4-209ENST00000454428 C7orf43Q8WVR3 580 aa23.38■■□□□ 1.33
UBE2D4-209ENST00000454428 KNSTRNQ9Y448 316 aa23.38■■□□□ 1.33
UBE2D4-209ENST00000454428 IL6STP40189 918 aaPredicted RBP23.37■■□□□ 1.33
UBE2D4-209ENST00000454428 ZNF790Q6PG37 636 aa23.37■■□□□ 1.33
UBE2D4-209ENST00000454428 TTC5Q8N0Z6 440 aa23.37■■□□□ 1.33
UBE2D4-209ENST00000454428 CNBD1Q8NA66 436 aa23.37■■□□□ 1.33
UBE2D4-209ENST00000454428 IL17REQ8NFR9 667 aa23.37■■□□□ 1.33
UBE2D4-209ENST00000454428 CNKSR1Q969H4 720 aa23.37■■□□□ 1.33
UBE2D4-209ENST00000454428 A1BGP04217 495 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms