RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 SERTM1A2A2V5 107 aa7.6□□□□□ -1.19
HMGB1P16-201ENST00000447155 FKBP4Q02790 459 aaKnown RBP eCLIP7.6□□□□□ -1.19
HMGB1P16-201ENST00000447155 NAA30Q147X3 362 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P16-201ENST00000447155 GNASQ5JWF2 1037 aa7.6□□□□□ -1.19
HMGB1P16-201ENST00000447155 SLC27A3Q5K4L6 730 aa7.6□□□□□ -1.19
HMGB1P16-201ENST00000447155 RHBDD1Q8TEB9 315 aa7.6□□□□□ -1.19
HMGB1P16-201ENST00000447155 NIFKQ9BYG3 293 aaKnown RBP7.6□□□□□ -1.19
HMGB1P16-201ENST00000447155 CABP1Q9NZU7 370 aa7.6□□□□□ -1.19
HMGB1P16-201ENST00000447155 H3BRB1 525 aa7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 EML1O00423 815 aa7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 NOS2P35228 1153 aa7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 MRPL14Q6P1L8 145 aaKnown RBP7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 C16orf46Q6P387 395 aa7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 GLYCTKQ8IVS8 523 aa7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 ZDHHC1Q8WTX9 485 aa7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 TUT1Q9H6E5 874 aaKnown RBP7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 POLMQ9NP87 494 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 ZNF232Q9UNY5 417 aa7.59□□□□□ -1.19
HMGB1P16-201ENST00000447155 DGAT1O75907 488 aa7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 BMP2P12643 396 aa7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 SMCPP49901 116 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 SCARF1Q14162 830 aa7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 CTC1Q2NKJ3 1217 aa7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 FOXD4L5Q5VV16 416 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 RGS22Q8NE09 1264 aa7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 L3MBTL2Q969R5 705 aa7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 MYO19Q96H55 970 aa7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 ANO2Q9NQ90 1003 aa7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 BIN2Q9UBW5 565 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P16-201ENST00000447155 SPATA31C2B4DYI2 1134 aa7.57□□□□□ -1.2
HMGB1P16-201ENST00000447155 NRG2O14511 850 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P16-201ENST00000447155 CTSOP43234 321 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P16-201ENST00000447155 C6orf118Q5T5N4 469 aa7.57□□□□□ -1.2
HMGB1P16-201ENST00000447155 FAM13AO94988 1023 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 NPR3P17342 541 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 MTMR3Q13615 1198 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 PKDCCQ504Y2 493 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 C4orf17Q53FE4 359 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 COX20Q5RI15 118 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 NGLY1Q96IV0 654 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 SAP130Q9H0E3 1048 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 QTRT2Q9H974 415 aaKnown RBP7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 PARP3Q9Y6F1 533 aa7.56□□□□□ -1.2
HMGB1P16-201ENST00000447155 RTN1Q16799 776 aa7.55□□□□□ -1.2
HMGB1P16-201ENST00000447155 SH3PXD2AQ5TCZ1 1133 aa7.55□□□□□ -1.2
HMGB1P16-201ENST00000447155 C1orf53Q5VUE5 145 aa7.55□□□□□ -1.2
HMGB1P16-201ENST00000447155 ALDH16A1Q8IZ83 802 aa7.55□□□□□ -1.2
HMGB1P16-201ENST00000447155 RNF217Q8TC41 542 aa7.55□□□□□ -1.2
HMGB1P16-201ENST00000447155 PHACTR1Q9C0D0 580 aa7.55□□□□□ -1.2
HMGB1P16-201ENST00000447155 HCN4Q9Y3Q4 1203 aa7.55□□□□□ -1.2
HMGB1P16-201ENST00000447155 TNFRSF10BO14763 440 aa7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 AXIN1O15169 862 aa7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 GFRA3O60609 400 aa7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 PLA2G4AP47712 749 aa7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 MARSP56192 900 aaKnown RBP7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 ECM1Q16610 540 aa7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 WDR44Q5JSH3 913 aa7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 CRIPAKQ8N1N5 446 aa7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 STIM2Q9P246 746 aa7.54□□□□□ -1.2
HMGB1P16-201ENST00000447155 TTLL8A6PVC2 850 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 BMP1P13497 986 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 ARHGAP4P98171 946 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 LAPTM4AQ15012 233 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 NBPF1Q3BBV0 1214 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 NBPF10Q6P3W6 841 aaKnown RBP7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 LYSMD3Q7Z3D4 306 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 TRIM46Q7Z4K8 759 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 ZDHHC3Q9NYG2 299 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 LRFN2Q9ULH4 789 aa7.53□□□□□ -1.2
HMGB1P16-201ENST00000447155 SOS2Q07890 1332 aaPredicted RBP7.52□□□□□ -1.2
HMGB1P16-201ENST00000447155 ERCC3P19447 782 aa7.52□□□□□ -1.21
HMGB1P16-201ENST00000447155 MPSTP25325 297 aa7.52□□□□□ -1.21
HMGB1P16-201ENST00000447155 BRD2P25440 801 aaKnown RBP7.52□□□□□ -1.21
HMGB1P16-201ENST00000447155 TXLNAP40222 546 aa7.52□□□□□ -1.21
HMGB1P16-201ENST00000447155 PHKA2P46019 1235 aa7.52□□□□□ -1.21
HMGB1P16-201ENST00000447155 POU4F2Q12837 409 aa7.52□□□□□ -1.21
HMGB1P16-201ENST00000447155 PRICKLE2Q7Z3G6 844 aa7.52□□□□□ -1.21
HMGB1P16-201ENST00000447155 ABTB2Q8N961 1025 aa7.52□□□□□ -1.21
HMGB1P16-201ENST00000447155 C11orf91Q3C1V1 193 aa7.51□□□□□ -1.21
HMGB1P16-201ENST00000447155 ALKBH2Q6NS38 261 aa7.51□□□□□ -1.21
HMGB1P16-201ENST00000447155 AIDAQ96BJ3 306 aa7.51□□□□□ -1.21
HMGB1P16-201ENST00000447155 GPC6Q9Y625 555 aaPredicted RBP7.51□□□□□ -1.21
HMGB1P16-201ENST00000447155 TATP17735 454 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P16-201ENST00000447155 DGKZQ13574 1117 aa7.5□□□□□ -1.21
HMGB1P16-201ENST00000447155 HIF1AQ16665 826 aa7.5□□□□□ -1.21
HMGB1P16-201ENST00000447155 NOM1Q5C9Z4 860 aaKnown RBP7.5□□□□□ -1.21
HMGB1P16-201ENST00000447155 DNAJC14Q6Y2X3 702 aaPredicted RBP7.5□□□□□ -1.21
HMGB1P16-201ENST00000447155 ZFP42Q96MM3 310 aa7.5□□□□□ -1.21
HMGB1P16-201ENST00000447155 DCTN4Q9UJW0 460 aa7.5□□□□□ -1.21
HMGB1P16-201ENST00000447155 MAPK1P28482 360 aa7.49□□□□□ -1.21
HMGB1P16-201ENST00000447155 EIF1AXP47813 144 aaKnown RBP7.49□□□□□ -1.21
HMGB1P16-201ENST00000447155 RHPN1Q8TCX5 695 aa7.49□□□□□ -1.21
HMGB1P16-201ENST00000447155 KLK14Q9P0G3 267 aa7.49□□□□□ -1.21
HMGB1P16-201ENST00000447155 A0A1B0GTH6 734 aa7.48□□□□□ -1.21
HMGB1P16-201ENST00000447155 FIGNL2A6NMB9 653 aa7.48□□□□□ -1.21
HMGB1P16-201ENST00000447155 RHOQP17081 205 aa7.48□□□□□ -1.21
HMGB1P16-201ENST00000447155 ZSCAN29Q8IWY8 852 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P16-201ENST00000447155 C7orf43Q8WVR3 580 aa7.48□□□□□ -1.21
HMGB1P16-201ENST00000447155 FOXD4L4Q8WXT5 416 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P16-201ENST00000447155 IFT43Q96FT9 208 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms