RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 NCAPD2Q15021 1401 aa14.04□□□□□ -0.16
ATG4B-211ENST00000429899 ANKRD26Q9UPS8 1709 aa14.04□□□□□ -0.16
ATG4B-211ENST00000429899 RC3H1Q5TC82 1133 aaKnown RBP14.03□□□□□ -0.16
ATG4B-211ENST00000429899 CNTNAP4Q9C0A0 1308 aa14.02□□□□□ -0.17
ATG4B-211ENST00000429899 NFKBIEO00221 500 aa14.02□□□□□ -0.17
ATG4B-211ENST00000429899 DEFB115Q30KQ5 88 aa14.02□□□□□ -0.17
ATG4B-211ENST00000429899 COL11A2P13942 1736 aaPredicted RBP14.01□□□□□ -0.17
ATG4B-211ENST00000429899 WDR33Q9C0J8 1336 aaKnown RBP14.01□□□□□ -0.17
ATG4B-211ENST00000429899 POLRMTO00411 1230 aaKnown RBP14.01□□□□□ -0.17
ATG4B-211ENST00000429899 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
ATG4B-211ENST00000429899 ADAMTSL1Q8N6G6 1762 aa14.01□□□□□ -0.17
ATG4B-211ENST00000429899 THSD7BQ9C0I4 1608 aa14.01□□□□□ -0.17
ATG4B-211ENST00000429899 MCOLN1Q9GZU1 580 aa14□□□□□ -0.17
ATG4B-211ENST00000429899 GGNBP2Q9H3C7 697 aa14□□□□□ -0.17
ATG4B-211ENST00000429899 TSKSQ9UJT2 592 aa14□□□□□ -0.17
ATG4B-211ENST00000429899 FLT4P35916 1363 aa13.99□□□□□ -0.17
ATG4B-211ENST00000429899 USP42Q9H9J4 1324 aaKnown RBP13.99□□□□□ -0.17
ATG4B-211ENST00000429899 RASSF10A6NK89 507 aa13.99□□□□□ -0.17
ATG4B-211ENST00000429899 DDNO94850 711 aaPredicted RBP13.99□□□□□ -0.17
ATG4B-211ENST00000429899 PHKG2P15735 406 aa13.99□□□□□ -0.17
ATG4B-211ENST00000429899 TM4SF1P30408 202 aa13.99□□□□□ -0.17
ATG4B-211ENST00000429899 ERFEQ4G0M1 354 aa13.99□□□□□ -0.17
ATG4B-211ENST00000429899 BEGAINQ9BUH8 593 aa13.99□□□□□ -0.17
ATG4B-211ENST00000429899 SPG7Q9UQ90 795 aa13.99□□□□□ -0.17
ATG4B-211ENST00000429899 FYB1O15117 783 aa13.98□□□□□ -0.17
ATG4B-211ENST00000429899 ITGBL1O95965 494 aaPredicted RBP13.98□□□□□ -0.17
ATG4B-211ENST00000429899 LDHDQ86WU2 507 aa13.98□□□□□ -0.17
ATG4B-211ENST00000429899 SLX4Q8IY92 1834 aa13.98□□□□□ -0.17
ATG4B-211ENST00000429899 TRPM7Q96QT4 1865 aa13.97□□□□□ -0.17
ATG4B-211ENST00000429899 ARFGEF2Q9Y6D5 1785 aa13.97□□□□□ -0.17
ATG4B-211ENST00000429899 TTLL6Q8N841 843 aa13.97□□□□□ -0.17
ATG4B-211ENST00000429899 ABT1Q9ULW3 272 aaKnown RBP13.97□□□□□ -0.17
ATG4B-211ENST00000429899 GRM1Q13255 1194 aa13.96□□□□□ -0.17
ATG4B-211ENST00000429899 EAPPQ56P03 285 aaPredicted RBP13.96□□□□□ -0.17
ATG4B-211ENST00000429899 IFNL2Q8IZJ0 200 aa13.96□□□□□ -0.17
ATG4B-211ENST00000429899 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
ATG4B-211ENST00000429899 CLEC11AQ9Y240 323 aa13.96□□□□□ -0.17
ATG4B-211ENST00000429899 LTBP1Q14766 1721 aa13.95□□□□□ -0.18
ATG4B-211ENST00000429899 CRKLP46109 303 aaKnown RBP13.95□□□□□ -0.18
ATG4B-211ENST00000429899 PRPF38BQ5VTL8 546 aaKnown RBP13.95□□□□□ -0.18
ATG4B-211ENST00000429899 PAXIP1Q6ZW49 1069 aaPredicted RBP13.95□□□□□ -0.18
ATG4B-211ENST00000429899 SCN11AQ9UI33 1791 aa13.94□□□□□ -0.18
ATG4B-211ENST00000429899 PUS7Q96PZ0 661 aaKnown RBP13.94□□□□□ -0.18
ATG4B-211ENST00000429899 TAF1DQ9H5J8 278 aaPredicted RBP13.94□□□□□ -0.18
ATG4B-211ENST00000429899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.94□□□□□ -0.18
ATG4B-211ENST00000429899 EMILIN1Q9Y6C2 1016 aa13.94□□□□□ -0.18
ATG4B-211ENST00000429899 KIF24Q5T7B8 1368 aa13.94□□□□□ -0.18
ATG4B-211ENST00000429899 CARMIL3Q8ND23 1372 aa13.94□□□□□ -0.18
ATG4B-211ENST00000429899 IQCA1LA6NCM1 817 aa13.93□□□□□ -0.18
ATG4B-211ENST00000429899 DGKZQ13574 1117 aa13.93□□□□□ -0.18
ATG4B-211ENST00000429899 C2CD5Q86YS7 1000 aa13.93□□□□□ -0.18
ATG4B-211ENST00000429899 SOX10P56693 466 aa13.92□□□□□ -0.18
ATG4B-211ENST00000429899 USPL1Q5W0Q7 1092 aa13.92□□□□□ -0.18
ATG4B-211ENST00000429899 EYA1Q99502 592 aa13.92□□□□□ -0.18
ATG4B-211ENST00000429899 CARD11Q9BXL7 1154 aa13.92□□□□□ -0.18
ATG4B-211ENST00000429899 C21orf2O43822 256 aa13.91□□□□□ -0.18
ATG4B-211ENST00000429899 PTCD1O75127 700 aaKnown RBP13.91□□□□□ -0.18
ATG4B-211ENST00000429899 NFIXQ14938 502 aa13.91□□□□□ -0.18
ATG4B-211ENST00000429899 MAP1SQ66K74 1059 aaPredicted RBP13.91□□□□□ -0.18
ATG4B-211ENST00000429899 INTS5Q6P9B9 1019 aaKnown RBP13.91□□□□□ -0.18
ATG4B-211ENST00000429899 CAPNS2Q96L46 248 aa13.91□□□□□ -0.18
ATG4B-211ENST00000429899 ZNF316A6NFI3 1004 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-211ENST00000429899 ERVV-2B6SEH9 535 aa13.9□□□□□ -0.18
ATG4B-211ENST00000429899 H0YIN7 160 aa13.9□□□□□ -0.18
ATG4B-211ENST00000429899 CYP4F22Q6NT55 531 aa13.9□□□□□ -0.18
ATG4B-211ENST00000429899 GPR101Q96P66 508 aaPredicted RBP13.9□□□□□ -0.18
ATG4B-211ENST00000429899 CNTROBQ8N137 903 aa13.89□□□□□ -0.19
ATG4B-211ENST00000429899 ZNF622Q969S3 477 aaKnown RBP eCLIP13.89□□□□□ -0.192e-6■□□□□ 9.1
ATG4B-211ENST00000429899 ZPR1O75312 459 aa13.88□□□□□ -0.19
ATG4B-211ENST00000429899 SERPINB2P05120 415 aa13.88□□□□□ -0.19
ATG4B-211ENST00000429899 ECE1P42892 770 aa13.88□□□□□ -0.19
ATG4B-211ENST00000429899 L3MBTL3Q96JM7 780 aaPredicted RBP13.88□□□□□ -0.19
ATG4B-211ENST00000429899 TESK2Q96S53 571 aa13.88□□□□□ -0.19
ATG4B-211ENST00000429899 TAOK3Q9H2K8 898 aa13.88□□□□□ -0.19
ATG4B-211ENST00000429899 BCL2L12Q9HB09 334 aa13.88□□□□□ -0.19
ATG4B-211ENST00000429899 PPM1GO15355 546 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-211ENST00000429899 AOC2O75106 756 aa13.87□□□□□ -0.19
ATG4B-211ENST00000429899 HSPA5P11021 654 aaKnown RBP13.87□□□□□ -0.19
ATG4B-211ENST00000429899 EIF4G2P78344 907 aaKnown RBP eCLIP13.87□□□□□ -0.19
ATG4B-211ENST00000429899 EPHX2P34913 555 aa13.86□□□□□ -0.19
ATG4B-211ENST00000429899 HACL1Q9UJ83 578 aa13.86□□□□□ -0.19
ATG4B-211ENST00000429899 SOS1Q07889 1333 aaPredicted RBP13.86□□□□□ -0.19
ATG4B-211ENST00000429899 LTBP3Q9NS15 1303 aa13.86□□□□□ -0.19
ATG4B-211ENST00000429899 CABP4P57796 275 aa13.85□□□□□ -0.19
ATG4B-211ENST00000429899 FMR1Q06787 632 aaKnown RBP eCLIP13.85□□□□□ -0.19
ATG4B-211ENST00000429899 DDX21Q9NR30 783 aaKnown RBP eCLIP13.85□□□□□ -0.19
ATG4B-211ENST00000429899 WASHC2AQ641Q2 1341 aa13.85□□□□□ -0.19
ATG4B-211ENST00000429899 NARFQ9UHQ1 456 aa13.84□□□□□ -0.19
ATG4B-211ENST00000429899 SCN7AQ01118 1682 aa13.84□□□□□ -0.19
ATG4B-211ENST00000429899 DNAJC10Q8IXB1 793 aa13.83□□□□□ -0.2
ATG4B-211ENST00000429899 CCDC24Q8N4L8 307 aa13.83□□□□□ -0.2
ATG4B-211ENST00000429899 NFATC2IPQ8NCF5 419 aa13.83□□□□□ -0.2
ATG4B-211ENST00000429899 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
ATG4B-211ENST00000429899 ZNF541Q9H0D2 1346 aa13.83□□□□□ -0.2
ATG4B-211ENST00000429899 COL15A1P39059 1388 aa13.83□□□□□ -0.2
ATG4B-211ENST00000429899 UBR2Q8IWV8 1755 aa13.82□□□□□ -0.2
ATG4B-211ENST00000429899 CA12O43570 354 aa13.82□□□□□ -0.2
ATG4B-211ENST00000429899 PNMA8AQ86V59 439 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-211ENST00000429899 ST20-MTHFSA0A0A6YYL1 179 aa13.81□□□□□ -0.2
ATG4B-211ENST00000429899 MAP2K2P36507 400 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms