RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 COG6Q9Y2V7 657 aa11.5□□□□□ -0.57
NR1I3-209ENST00000428574 ITPRIPQ8IWB1 547 aa11.49□□□□□ -0.57
NR1I3-209ENST00000428574 ZNF496Q96IT1 587 aaPredicted RBP11.49□□□□□ -0.57
NR1I3-209ENST00000428574 ZBTB40Q9NUA8 1239 aa11.49□□□□□ -0.57
NR1I3-209ENST00000428574 ATP10DQ9P241 1426 aa11.49□□□□□ -0.57
NR1I3-209ENST00000428574 ZNF831Q5JPB2 1677 aa11.49□□□□□ -0.57
NR1I3-209ENST00000428574 KCNQ3O43525 872 aa11.48□□□□□ -0.57
NR1I3-209ENST00000428574 TMEM57Q8N5G2 664 aa11.48□□□□□ -0.57
NR1I3-209ENST00000428574 CCDC9Q9Y3X0 531 aaKnown RBP11.48□□□□□ -0.57
NR1I3-209ENST00000428574 AFF2P51816 1311 aa11.48□□□□□ -0.57
NR1I3-209ENST00000428574 KDM2BQ8NHM5 1336 aa11.48□□□□□ -0.57
NR1I3-209ENST00000428574 DOT1LQ8TEK3 1739 aa11.47□□□□□ -0.57
NR1I3-209ENST00000428574 C5P01031 1676 aa11.47□□□□□ -0.57
NR1I3-209ENST00000428574 DDX58O95786 925 aaKnown RBP11.47□□□□□ -0.57
NR1I3-209ENST00000428574 HDAC1Q13547 482 aaPredicted RBP11.47□□□□□ -0.57
NR1I3-209ENST00000428574 GJD4Q96KN9 370 aaPredicted RBP11.47□□□□□ -0.57
NR1I3-209ENST00000428574 ZBTB7BO15156 539 aaPredicted RBP11.46□□□□□ -0.57
NR1I3-209ENST00000428574 SLC39A6Q13433 755 aa11.46□□□□□ -0.57
NR1I3-209ENST00000428574 FKBP5Q13451 457 aaPredicted RBP11.46□□□□□ -0.57
NR1I3-209ENST00000428574 B4GALNT3Q6L9W6 998 aa11.46□□□□□ -0.57
NR1I3-209ENST00000428574 PIGBQ92521 554 aa11.46□□□□□ -0.57
NR1I3-209ENST00000428574 CHPF2Q9P2E5 772 aa11.46□□□□□ -0.57
NR1I3-209ENST00000428574 HDAC5Q9UQL6 1122 aa11.46□□□□□ -0.57
NR1I3-209ENST00000428574 ITGB4P16144 1822 aa11.46□□□□□ -0.58
NR1I3-209ENST00000428574 PDIA6Q15084 440 aa11.45□□□□□ -0.58
NR1I3-209ENST00000428574 MARCH10Q8NA82 808 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-209ENST00000428574 SMARCC1Q92922 1105 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-209ENST00000428574 RWDD1Q9H446 243 aaPredicted RBP11.45□□□□□ -0.58
NR1I3-209ENST00000428574 TNNQ9UQP3 1299 aa11.45□□□□□ -0.58
NR1I3-209ENST00000428574 GNAI3P08754 354 aa11.44□□□□□ -0.58
NR1I3-209ENST00000428574 EIF2S2P20042 333 aaKnown RBP11.44□□□□□ -0.58
NR1I3-209ENST00000428574 FAM98CQ17RN3 349 aaKnown RBP11.44□□□□□ -0.58
NR1I3-209ENST00000428574 ZNF772Q68DY9 489 aaPredicted RBP11.44□□□□□ -0.58
NR1I3-209ENST00000428574 NHSQ6T4R5 1651 aa11.43□□□□□ -0.58
NR1I3-209ENST00000428574 TCERG1O14776 1098 aaKnown RBP11.43□□□□□ -0.58
NR1I3-209ENST00000428574 ALDH1L1O75891 902 aa11.43□□□□□ -0.58
NR1I3-209ENST00000428574 STARD3NLO95772 234 aa11.43□□□□□ -0.58
NR1I3-209ENST00000428574 HMGB2P26583 209 aaKnown RBP11.43□□□□□ -0.58
NR1I3-209ENST00000428574 KSR2Q6VAB6 950 aa11.43□□□□□ -0.58
NR1I3-209ENST00000428574 G2E3Q7L622 706 aa11.43□□□□□ -0.58
NR1I3-209ENST00000428574 LRP10Q7Z4F1 713 aa11.43□□□□□ -0.58
NR1I3-209ENST00000428574 FBXO41Q8TF61 875 aa11.43□□□□□ -0.58
NR1I3-209ENST00000428574 DNAAF4Q8WXU2 420 aa11.43□□□□□ -0.58
NR1I3-209ENST00000428574 ATG3Q9NT62 314 aa11.43□□□□□ -0.58
NR1I3-209ENST00000428574 ADCY9O60503 1353 aa11.42□□□□□ -0.58
NR1I3-209ENST00000428574 RPAP2Q8IXW5 612 aaPredicted RBP11.42□□□□□ -0.58
NR1I3-209ENST00000428574 SRCIN1Q9C0H9 1055 aa11.42□□□□□ -0.58
NR1I3-209ENST00000428574 RREB1Q92766 1687 aa11.41□□□□□ -0.58
NR1I3-209ENST00000428574 PRIM1P49642 420 aaKnown RBP11.41□□□□□ -0.58
NR1I3-209ENST00000428574 LINS1Q8NG48 757 aa11.41□□□□□ -0.58
NR1I3-209ENST00000428574 PHAXQ9H814 394 aaKnown RBP11.41□□□□□ -0.58
NR1I3-209ENST00000428574 USP16Q9Y5T5 823 aa11.41□□□□□ -0.58
NR1I3-209ENST00000428574 COL15A1P39059 1388 aa11.41□□□□□ -0.58
NR1I3-209ENST00000428574 PI4KAP2A4QPH2 592 aa11.4□□□□□ -0.58
NR1I3-209ENST00000428574 RGL2O15211 777 aa11.4□□□□□ -0.58
NR1I3-209ENST00000428574 BEND3Q5T5X7 828 aa11.4□□□□□ -0.58
NR1I3-209ENST00000428574 PI4KAP1Q8N8J0 262 aa11.4□□□□□ -0.58
NR1I3-209ENST00000428574 QTRT2Q9H974 415 aaKnown RBP11.4□□□□□ -0.58
NR1I3-209ENST00000428574 ASAP1Q9ULH1 1129 aa11.4□□□□□ -0.58
NR1I3-209ENST00000428574 PCDHB15Q9Y5E8 787 aa11.4□□□□□ -0.58
NR1I3-209ENST00000428574 TJP1Q07157 1748 aa11.4□□□□□ -0.58
NR1I3-209ENST00000428574 PRAMEF22A3QJZ6 481 aa11.39□□□□□ -0.59
NR1I3-209ENST00000428574 PTCD1O75127 700 aaKnown RBP11.39□□□□□ -0.59
NR1I3-209ENST00000428574 NEXNQ0ZGT2 675 aa11.39□□□□□ -0.59
NR1I3-209ENST00000428574 SMC5Q8IY18 1101 aa11.39□□□□□ -0.59
NR1I3-209ENST00000428574 PLBD2Q8NHP8 589 aa11.39□□□□□ -0.59
NR1I3-209ENST00000428574 NECTIN2Q92692 538 aa11.39□□□□□ -0.59
NR1I3-209ENST00000428574 GCC1Q96CN9 775 aa11.39□□□□□ -0.59
NR1I3-209ENST00000428574 PALLDQ8WX93 1383 aa11.39□□□□□ -0.59
NR1I3-209ENST00000428574 UTYO14607 1347 aa11.38□□□□□ -0.59
NR1I3-209ENST00000428574 F6X3S4 739 aa11.38□□□□□ -0.59
NR1I3-209ENST00000428574 HMMRO75330 724 aa11.38□□□□□ -0.59
NR1I3-209ENST00000428574 GNAI2P04899 355 aa11.38□□□□□ -0.59
NR1I3-209ENST00000428574 RBM6P78332 1123 aaKnown RBP11.38□□□□□ -0.59
NR1I3-209ENST00000428574 PROSER3Q2NL68 480 aa11.38□□□□□ -0.59
NR1I3-209ENST00000428574 SLC4A10Q6U841 1118 aa11.38□□□□□ -0.59
NR1I3-209ENST00000428574 ANKRD44Q8N8A2 993 aa11.38□□□□□ -0.59
NR1I3-209ENST00000428574 METTL22Q9BUU2 404 aaPredicted RBP11.38□□□□□ -0.59
NR1I3-209ENST00000428574 UBTFL1P0CB47 393 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-209ENST00000428574 CYP19A1P11511 503 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-209ENST00000428574 IL6STP40189 918 aaPredicted RBP11.37□□□□□ -0.59
NR1I3-209ENST00000428574 ANKRD13DQ6ZTN6 518 aa11.37□□□□□ -0.59
NR1I3-209ENST00000428574 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
NR1I3-209ENST00000428574 XAGE3Q8WTP9 111 aa11.37□□□□□ -0.59
NR1I3-209ENST00000428574 MAP3K2Q9Y2U5 619 aa11.37□□□□□ -0.59
NR1I3-209ENST00000428574 LOC102724428A0A0B4J2F2 783 aa11.36□□□□□ -0.59
NR1I3-209ENST00000428574 A0A0G2JS52 829 aa11.36□□□□□ -0.59
NR1I3-209ENST00000428574 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
NR1I3-209ENST00000428574 IGHDP01880 384 aa11.36□□□□□ -0.59
NR1I3-209ENST00000428574 SIK1P57059 783 aa11.36□□□□□ -0.59
NR1I3-209ENST00000428574 MYT1Q01538 1121 aa11.36□□□□□ -0.59
NR1I3-209ENST00000428574 MTX1Q13505 466 aa11.36□□□□□ -0.59
NR1I3-209ENST00000428574 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
NR1I3-209ENST00000428574 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
NR1I3-209ENST00000428574 COPS6Q7L5N1 327 aa11.36□□□□□ -0.59
NR1I3-209ENST00000428574 RIC3Q7Z5B4 369 aa11.36□□□□□ -0.59
NR1I3-209ENST00000428574 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
NR1I3-209ENST00000428574 SYTL4Q96C24 671 aaPredicted RBP11.36□□□□□ -0.59
NR1I3-209ENST00000428574 MEIS3Q99687 375 aa11.36□□□□□ -0.59
NR1I3-209ENST00000428574 RBM42Q9BTD8 480 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms