RNA–Protein interactions for RNA: ENST00000424022.2

LBR-204, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-204ENST00000424022 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.01□□□□□ -0.81
LBR-204ENST00000424022 MEN1O00255 615 aa10□□□□□ -0.81
LBR-204ENST00000424022 SPINT1O43278 529 aa10□□□□□ -0.81
LBR-204ENST00000424022 GTF2E1P29083 439 aaPredicted RBP10□□□□□ -0.81
LBR-204ENST00000424022 LINC00528Q8N1L1 170 aa10□□□□□ -0.81
LBR-204ENST00000424022 FHDC1Q9C0D6 1143 aaPredicted RBP10□□□□□ -0.81
LBR-204ENST00000424022 ATP13A2Q9NQ11 1180 aa10□□□□□ -0.81
LBR-204ENST00000424022 CHMP3Q9Y3E7 222 aa10□□□□□ -0.81
LBR-204ENST00000424022 ATAD2Q6PL18 1390 aa10□□□□□ -0.81
LBR-204ENST00000424022 PSMA6P60900 246 aaKnown RBP9.99□□□□□ -0.81
LBR-204ENST00000424022 CENPCQ03188 943 aa9.99□□□□□ -0.81
LBR-204ENST00000424022 SLC9A9Q8IVB4 645 aa9.99□□□□□ -0.81
LBR-204ENST00000424022 SCG3Q8WXD2 468 aaKnown RBP9.99□□□□□ -0.81
LBR-204ENST00000424022 TSPAN10Q9H1Z9 355 aaPredicted RBP9.99□□□□□ -0.81
LBR-204ENST00000424022 IVNS1ABPQ9Y6Y0 642 aa9.99□□□□□ -0.81
LBR-204ENST00000424022 TOP2AP11388 1531 aaKnown RBP9.98□□□□□ -0.81
LBR-204ENST00000424022 URB2Q14146 1524 aaKnown RBP9.98□□□□□ -0.81
LBR-204ENST00000424022 RNF144AP50876 292 aaPredicted RBP9.98□□□□□ -0.81
LBR-204ENST00000424022 ZSCAN10Q96SZ4 725 aaPredicted RBP9.98□□□□□ -0.81
LBR-204ENST00000424022 MRPL14Q6P1L8 145 aaKnown RBP9.97□□□□□ -0.81
LBR-204ENST00000424022 PPARGC1BQ86YN6 1023 aaKnown RBP9.97□□□□□ -0.81
LBR-204ENST00000424022 VTI1AQ96AJ9 217 aa9.97□□□□□ -0.81
LBR-204ENST00000424022 ZNF395Q9H8N7 513 aaPredicted RBP9.97□□□□□ -0.81
LBR-204ENST00000424022 PODXL2Q9NZ53 605 aa9.97□□□□□ -0.81
LBR-204ENST00000424022 IQSEC3Q9UPP2 1182 aaPredicted RBP9.97□□□□□ -0.81
LBR-204ENST00000424022 C11orf95C9JLR9 678 aaPredicted RBP9.96□□□□□ -0.82
LBR-204ENST00000424022 C21orf2O43822 256 aa9.96□□□□□ -0.82
LBR-204ENST00000424022 PPP1R12BO60237 982 aaPredicted RBP9.96□□□□□ -0.82
LBR-204ENST00000424022 FKBP5Q13451 457 aaPredicted RBP9.96□□□□□ -0.82
LBR-204ENST00000424022 POTEAQ6S8J7 498 aa9.96□□□□□ -0.82
LBR-204ENST00000424022 EGFL7Q9UHF1 273 aa9.96□□□□□ -0.82
LBR-204ENST00000424022 HIRAP54198 1017 aaPredicted RBP9.95□□□□□ -0.82
LBR-204ENST00000424022 SCARF1Q14162 830 aa9.95□□□□□ -0.82
LBR-204ENST00000424022 TEAD4Q15561 434 aa9.95□□□□□ -0.82
LBR-204ENST00000424022 RHBDD1Q8TEB9 315 aa9.95□□□□□ -0.82
LBR-204ENST00000424022 ZNF775Q96BV0 537 aaPredicted RBP9.95□□□□□ -0.82
LBR-204ENST00000424022 C2orf49Q9BVC5 232 aaPredicted RBP9.95□□□□□ -0.82
LBR-204ENST00000424022 GRIP2Q9C0E4 1043 aa9.95□□□□□ -0.82
LBR-204ENST00000424022 BMP2P12643 396 aa9.94□□□□□ -0.82
LBR-204ENST00000424022 BMP1P13497 986 aa9.94□□□□□ -0.82
LBR-204ENST00000424022 GNASQ5JWF2 1037 aa9.94□□□□□ -0.82
LBR-204ENST00000424022 SLC27A3Q5K4L6 730 aa9.94□□□□□ -0.82
LBR-204ENST00000424022 TMEM214Q6NUQ4 689 aaKnown RBP9.94□□□□□ -0.82
LBR-204ENST00000424022 NIFKQ9BYG3 293 aaKnown RBP9.94□□□□□ -0.82
LBR-204ENST00000424022 GZF1Q9H116 711 aaPredicted RBP9.94□□□□□ -0.82
LBR-204ENST00000424022 INSM2Q96T92 566 aaPredicted RBP9.93□□□□□ -0.82
LBR-204ENST00000424022 POLMQ9NP87 494 aaPredicted RBP9.93□□□□□ -0.82
LBR-204ENST00000424022 SERTM1A2A2V5 107 aa9.92□□□□□ -0.82
LBR-204ENST00000424022 SPATA31C2B4DYI2 1134 aa9.92□□□□□ -0.82
LBR-204ENST00000424022 LGR5O75473 907 aa9.92□□□□□ -0.82
LBR-204ENST00000424022 SNRPBP14678 240 aaKnown RBP9.92□□□□□ -0.82
LBR-204ENST00000424022 WDR44Q5JSH3 913 aa9.92□□□□□ -0.82
LBR-204ENST00000424022 SND1Q7KZF4 910 aaKnown RBP eCLIP9.92□□□□□ -0.822e-7■□□□□ 9.9
LBR-204ENST00000424022 TRIM46Q7Z4K8 759 aa9.92□□□□□ -0.82
LBR-204ENST00000424022 ZNF295-AS1Q8N0V1 137 aa9.92□□□□□ -0.82
LBR-204ENST00000424022 TMCO4Q5TGY1 634 aa9.91□□□□□ -0.82
LBR-204ENST00000424022 FOXD4L5Q5VV16 416 aaPredicted RBP9.91□□□□□ -0.82
LBR-204ENST00000424022 CHMP7Q8WUX9 453 aaPredicted RBP9.91□□□□□ -0.82
LBR-204ENST00000424022 CABP1Q9NZU7 370 aa9.91□□□□□ -0.82
LBR-204ENST00000424022 CCDC9Q9Y3X0 531 aaKnown RBP9.91□□□□□ -0.82
LBR-204ENST00000424022 NOS2P35228 1153 aa9.9□□□□□ -0.82
LBR-204ENST00000424022 SF3B2Q13435 895 aaKnown RBP9.9□□□□□ -0.82
LBR-204ENST00000424022 TRIM47Q96LD4 638 aa9.9□□□□□ -0.82
LBR-204ENST00000424022 MKNK1Q9BUB5 465 aa9.9□□□□□ -0.82
LBR-204ENST00000424022 USP3Q9Y6I4 520 aa9.9□□□□□ -0.82
LBR-204ENST00000424022 IFT140Q96RY7 1462 aa9.9□□□□□ -0.83
LBR-204ENST00000424022 SOWAHDA6NJG2 315 aa9.89□□□□□ -0.83
LBR-204ENST00000424022 EML1O00423 815 aa9.89□□□□□ -0.83
LBR-204ENST00000424022 CTSOP43234 321 aaPredicted RBP9.89□□□□□ -0.83
LBR-204ENST00000424022 TBCELQ5QJ74 424 aa9.89□□□□□ -0.83
LBR-204ENST00000424022 C6orf118Q5T5N4 469 aa9.89□□□□□ -0.83
LBR-204ENST00000424022 RNF217Q8TC41 542 aa9.89□□□□□ -0.83
LBR-204ENST00000424022 MYO19Q96H55 970 aa9.89□□□□□ -0.83
LBR-204ENST00000424022 SENP2Q9HC62 589 aa9.89□□□□□ -0.83
LBR-204ENST00000424022 PRDM2Q13029 1718 aa9.89□□□□□ -0.83
LBR-204ENST00000424022 ABCC8Q09428 1581 aa9.88□□□□□ -0.83
LBR-204ENST00000424022 CCDC88BA6NC98 1476 aa9.88□□□□□ -0.83
LBR-204ENST00000424022 TTLL8A6PVC2 850 aa9.88□□□□□ -0.83
LBR-204ENST00000424022 SERPINB4P48594 390 aa9.88□□□□□ -0.83
LBR-204ENST00000424022 C1orf53Q5VUE5 145 aa9.88□□□□□ -0.83
LBR-204ENST00000424022 LYSMD3Q7Z3D4 306 aa9.88□□□□□ -0.83
LBR-204ENST00000424022 HELQQ8TDG4 1101 aa9.88□□□□□ -0.83
LBR-204ENST00000424022 L3MBTL2Q969R5 705 aa9.88□□□□□ -0.83
LBR-204ENST00000424022 PURBQ96QR8 312 aaKnown RBP9.88□□□□□ -0.83
LBR-204ENST00000424022 C16orf46Q6P387 395 aa9.87□□□□□ -0.83
LBR-204ENST00000424022 ZDHHC1Q8WTX9 485 aa9.87□□□□□ -0.83
LBR-204ENST00000424022 GTF3C2Q8WUA4 911 aaPredicted RBP9.87□□□□□ -0.83
LBR-204ENST00000424022 ZDHHC3Q9NYG2 299 aa9.87□□□□□ -0.83
LBR-204ENST00000424022 SEPT3Q9UH03 358 aa9.87□□□□□ -0.83
LBR-204ENST00000424022 ZNF232Q9UNY5 417 aa9.87□□□□□ -0.83
LBR-204ENST00000424022 GPC6Q9Y625 555 aaPredicted RBP9.87□□□□□ -0.83
LBR-204ENST00000424022 SOS2Q07890 1332 aaPredicted RBP9.86□□□□□ -0.83
LBR-204ENST00000424022 ICMTO60725 284 aa9.86□□□□□ -0.83
LBR-204ENST00000424022 NBPF1Q3BBV0 1214 aa9.86□□□□□ -0.83
LBR-204ENST00000424022 C4orf17Q53FE4 359 aa9.86□□□□□ -0.83
LBR-204ENST00000424022 ZFP42Q96MM3 310 aa9.86□□□□□ -0.83
LBR-204ENST00000424022 TOPBP1Q92547 1522 aa9.86□□□□□ -0.83
LBR-204ENST00000424022 ZNF608Q9ULD9 1512 aaPredicted RBP9.86□□□□□ -0.83
LBR-204ENST00000424022 ABL1P00519 1130 aa9.85□□□□□ -0.83
LBR-204ENST00000424022 SCNN1AP37088 669 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms