RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 SOS1Q07889 1333 aaPredicted RBP16.45■□□□□ 0.22
SPTLC1P3-201ENST00000403408 NFIXQ14938 502 aa16.45■□□□□ 0.22
SPTLC1P3-201ENST00000403408 CARMIL3Q8ND23 1372 aa16.45■□□□□ 0.22
SPTLC1P3-201ENST00000403408 DLEC1Q9Y238 1755 aa16.45■□□□□ 0.22
SPTLC1P3-201ENST00000403408 GLTPD2A6NH11 291 aa16.44■□□□□ 0.22
SPTLC1P3-201ENST00000403408 NFKBIEO00221 500 aa16.44■□□□□ 0.22
SPTLC1P3-201ENST00000403408 AMOTQ4VCS5 1084 aa16.44■□□□□ 0.22
SPTLC1P3-201ENST00000403408 LGR6Q9HBX8 967 aa16.44■□□□□ 0.22
SPTLC1P3-201ENST00000403408 TIAM2Q8IVF5 1701 aa16.43■□□□□ 0.22
SPTLC1P3-201ENST00000403408 CYP19A1P11511 503 aaPredicted RBP16.42■□□□□ 0.22
SPTLC1P3-201ENST00000403408 SLC39A6Q13433 755 aa16.42■□□□□ 0.22
SPTLC1P3-201ENST00000403408 ZC3H4Q9UPT8 1303 aaKnown RBP16.42■□□□□ 0.22
SPTLC1P3-201ENST00000403408 VEGFAP15692 232 aaPredicted RBP16.41■□□□□ 0.22
SPTLC1P3-201ENST00000403408 LMNB1P20700 586 aa16.41■□□□□ 0.22
SPTLC1P3-201ENST00000403408 SULT6B1Q6IMI4 303 aa16.41■□□□□ 0.22
SPTLC1P3-201ENST00000403408 ZBTB1Q9Y2K1 713 aa16.41■□□□□ 0.22
SPTLC1P3-201ENST00000403408 ANKRD31Q8N7Z5 1873 aa16.41■□□□□ 0.22
SPTLC1P3-201ENST00000403408 IL13P35225 146 aa16.4■□□□□ 0.22
SPTLC1P3-201ENST00000403408 C1orf141Q5JVX7 400 aa16.4■□□□□ 0.22
SPTLC1P3-201ENST00000403408 POLR3GLQ9BT43 218 aa16.4■□□□□ 0.22
SPTLC1P3-201ENST00000403408 NARFQ9UHQ1 456 aa16.4■□□□□ 0.22
SPTLC1P3-201ENST00000403408 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
SPTLC1P3-201ENST00000403408 ZPR1O75312 459 aa16.39■□□□□ 0.21
SPTLC1P3-201ENST00000403408 SERPINB2P05120 415 aa16.39■□□□□ 0.21
SPTLC1P3-201ENST00000403408 PANK3Q9H999 370 aa16.39■□□□□ 0.21
SPTLC1P3-201ENST00000403408 SLC52A2Q9HAB3 445 aa16.39■□□□□ 0.21
SPTLC1P3-201ENST00000403408 COL15A1P39059 1388 aa16.38■□□□□ 0.21
SPTLC1P3-201ENST00000403408 MRC1P22897 1456 aa16.38■□□□□ 0.21
SPTLC1P3-201ENST00000403408 POTEIP0CG38 1075 aa16.38■□□□□ 0.21
SPTLC1P3-201ENST00000403408 POTEJP0CG39 1038 aa16.38■□□□□ 0.21
SPTLC1P3-201ENST00000403408 TTLL6Q8N841 843 aa16.38■□□□□ 0.21
SPTLC1P3-201ENST00000403408 DICER1Q9UPY3 1922 aaKnown RBP16.37■□□□□ 0.21
SPTLC1P3-201ENST00000403408 COL11A2P13942 1736 aaPredicted RBP16.37■□□□□ 0.21
SPTLC1P3-201ENST00000403408 C2CD5Q86YS7 1000 aa16.37■□□□□ 0.21
SPTLC1P3-201ENST00000403408 FER1L6Q2WGJ9 1857 aa16.37■□□□□ 0.21
SPTLC1P3-201ENST00000403408 CCDC24Q8N4L8 307 aa16.36■□□□□ 0.21
SPTLC1P3-201ENST00000403408 RNMTO43148 476 aaKnown RBP16.35■□□□□ 0.21
SPTLC1P3-201ENST00000403408 AKAP4Q5JQC9 854 aa16.35■□□□□ 0.21
SPTLC1P3-201ENST00000403408 UBR2Q8IWV8 1755 aa16.33■□□□□ 0.21
SPTLC1P3-201ENST00000403408 EIF5P55010 431 aaKnown RBP16.33■□□□□ 0.2
SPTLC1P3-201ENST00000403408 TBC1D9BQ66K14 1250 aa16.33■□□□□ 0.2
SPTLC1P3-201ENST00000403408 BICDL1Q6ZP65 573 aa16.33■□□□□ 0.2
SPTLC1P3-201ENST00000403408 ZNF219Q9P2Y4 722 aaPredicted RBP16.33■□□□□ 0.2
SPTLC1P3-201ENST00000403408 MKRN1Q9UHC7 482 aaKnown RBP16.33■□□□□ 0.2
SPTLC1P3-201ENST00000403408 SLX4Q8IY92 1834 aa16.33■□□□□ 0.2
SPTLC1P3-201ENST00000403408 C21orf2O43822 256 aa16.32■□□□□ 0.2
SPTLC1P3-201ENST00000403408 CANXP27824 592 aaKnown RBP16.32■□□□□ 0.2
SPTLC1P3-201ENST00000403408 MAPK8IP2Q13387 824 aaPredicted RBP16.32■□□□□ 0.2
SPTLC1P3-201ENST00000403408 MORC1Q86VD1 984 aa16.32■□□□□ 0.2
SPTLC1P3-201ENST00000403408 H0YIN7 160 aa16.31■□□□□ 0.2
SPTLC1P3-201ENST00000403408 FOXN1O15353 648 aa16.31■□□□□ 0.2
SPTLC1P3-201ENST00000403408 DDNO94850 711 aaPredicted RBP16.31■□□□□ 0.2
SPTLC1P3-201ENST00000403408 MTHFSDQ2M296 383 aaKnown RBP16.31■□□□□ 0.2
SPTLC1P3-201ENST00000403408 HMOX1P09601 288 aa16.3■□□□□ 0.2
SPTLC1P3-201ENST00000403408 PRR5LQ6MZQ0 368 aa16.3■□□□□ 0.2
SPTLC1P3-201ENST00000403408 CREBZFQ9NS37 354 aa16.3■□□□□ 0.2
SPTLC1P3-201ENST00000403408 HSPA5P11021 654 aaKnown RBP16.29■□□□□ 0.2
SPTLC1P3-201ENST00000403408 ERFEQ4G0M1 354 aa16.29■□□□□ 0.2
SPTLC1P3-201ENST00000403408 CHADLQ6NUI6 762 aa16.29■□□□□ 0.2
SPTLC1P3-201ENST00000403408 VSIG10Q8N0Z9 540 aa16.29■□□□□ 0.2
SPTLC1P3-201ENST00000403408 ZNF622Q969S3 477 aaKnown RBP eCLIP16.29■□□□□ 0.2
SPTLC1P3-201ENST00000403408 CACNA1SQ13698 1873 aa16.29■□□□□ 0.2
SPTLC1P3-201ENST00000403408 SCN7AQ01118 1682 aa16.28■□□□□ 0.2
SPTLC1P3-201ENST00000403408 PASKQ96RG2 1323 aa16.28■□□□□ 0.2
SPTLC1P3-201ENST00000403408 BRIP1Q9BX63 1249 aa16.27■□□□□ 0.2
SPTLC1P3-201ENST00000403408 TBC1D2BQ9UPU7 963 aa16.27■□□□□ 0.2
SPTLC1P3-201ENST00000403408 CNTNAP1P78357 1384 aa16.26■□□□□ 0.19
SPTLC1P3-201ENST00000403408 LTBP3Q9NS15 1303 aa16.26■□□□□ 0.19
SPTLC1P3-201ENST00000403408 AMER1Q5JTC6 1135 aaPredicted RBP16.26■□□□□ 0.19
SPTLC1P3-201ENST00000403408 DPY19L2Q6NUT2 758 aa16.26■□□□□ 0.19
SPTLC1P3-201ENST00000403408 ZNF496Q96IT1 587 aaPredicted RBP16.26■□□□□ 0.19
SPTLC1P3-201ENST00000403408 C7orf43Q8WVR3 580 aa16.25■□□□□ 0.19
SPTLC1P3-201ENST00000403408 SIPA1L3O60292 1781 aaPredicted RBP16.24■□□□□ 0.19
SPTLC1P3-201ENST00000403408 ARFGEF2Q9Y6D5 1785 aa16.24■□□□□ 0.19
SPTLC1P3-201ENST00000403408 CAMTA2O94983 1202 aa16.24■□□□□ 0.19
SPTLC1P3-201ENST00000403408 ITGBL1O95965 494 aaPredicted RBP16.24■□□□□ 0.19
SPTLC1P3-201ENST00000403408 VEGFBP49765 207 aa16.24■□□□□ 0.19
SPTLC1P3-201ENST00000403408 IL17REQ8NFR9 667 aa16.24■□□□□ 0.19
SPTLC1P3-201ENST00000403408 TAOK3Q9H2K8 898 aa16.24■□□□□ 0.19
SPTLC1P3-201ENST00000403408 A1BGP04217 495 aa16.23■□□□□ 0.19
SPTLC1P3-201ENST00000403408 SRGNP10124 158 aa16.23■□□□□ 0.19
SPTLC1P3-201ENST00000403408 PDE6BP35913 854 aa16.23■□□□□ 0.19
SPTLC1P3-201ENST00000403408 PRPF40BQ6NWY9 871 aaKnown RBP16.23■□□□□ 0.19
SPTLC1P3-201ENST00000403408 OLFM4Q6UX06 510 aa16.23■□□□□ 0.19
SPTLC1P3-201ENST00000403408 TAF1DQ9H5J8 278 aaPredicted RBP16.23■□□□□ 0.19
SPTLC1P3-201ENST00000403408 KCNQ3O43525 872 aa16.22■□□□□ 0.19
SPTLC1P3-201ENST00000403408 PRDM10Q9NQV6 1147 aa16.22■□□□□ 0.19
SPTLC1P3-201ENST00000403408 ADAMTSL1Q8N6G6 1762 aa16.22■□□□□ 0.19
SPTLC1P3-201ENST00000403408 HEG1Q9ULI3 1381 aa16.22■□□□□ 0.19
SPTLC1P3-201ENST00000403408 ZNF541Q9H0D2 1346 aa16.21■□□□□ 0.19
SPTLC1P3-201ENST00000403408 STARD3NLO95772 234 aa16.21■□□□□ 0.19
SPTLC1P3-201ENST00000403408 STYK1Q6J9G0 422 aa16.21■□□□□ 0.19
SPTLC1P3-201ENST00000403408 L3MBTL3Q96JM7 780 aaPredicted RBP16.21■□□□□ 0.19
SPTLC1P3-201ENST00000403408 TIMELESSQ9UNS1 1208 aa16.21■□□□□ 0.19
SPTLC1P3-201ENST00000403408 SCN4AP35499 1836 aa16.21■□□□□ 0.19
SPTLC1P3-201ENST00000403408 BCORQ6W2J9 1755 aa16.21■□□□□ 0.18
SPTLC1P3-201ENST00000403408 A0A087WZG4 1122 aa16.2■□□□□ 0.18
SPTLC1P3-201ENST00000403408 PIP4K2AP48426 406 aaPredicted RBP16.2■□□□□ 0.18
SPTLC1P3-201ENST00000403408 ZNF790Q6PG37 636 aa16.2■□□□□ 0.18
SPTLC1P3-201ENST00000403408 WBP1LQ9NX94 342 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms