RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 TRIM44Q96DX7 344 aaPredicted RBP5.33□□□□□ -1.56
SMC6-203ENST00000402989 NAP1L5Q96NT1 182 aaPredicted RBP5.33□□□□□ -1.56
SMC6-203ENST00000402989 USP44Q9H0E7 712 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 GDPD2Q9HCC8 539 aa5.33□□□□□ -1.56
SMC6-203ENST00000402989 CAMTA1Q9Y6Y1 1673 aa5.32□□□□□ -1.56
SMC6-203ENST00000402989 CPA1P15085 419 aa5.32□□□□□ -1.56
SMC6-203ENST00000402989 PROSER3Q2NL68 480 aa5.32□□□□□ -1.56
SMC6-203ENST00000402989 CWC27Q6UX04 472 aaKnown RBP5.32□□□□□ -1.56
SMC6-203ENST00000402989 SPG7Q9UQ90 795 aa5.32□□□□□ -1.56
SMC6-203ENST00000402989 CHRNA2Q15822 529 aa5.32□□□□□ -1.56
SMC6-203ENST00000402989 USP31Q70CQ4 1352 aa5.32□□□□□ -1.56
SMC6-203ENST00000402989 MCCP23508 829 aa5.32□□□□□ -1.56
SMC6-203ENST00000402989 PROSER2Q86WR7 435 aaPredicted RBP5.32□□□□□ -1.56
SMC6-203ENST00000402989 MPNDQ8N594 471 aa5.32□□□□□ -1.56
SMC6-203ENST00000402989 ESYT1Q9BSJ8 1104 aa5.32□□□□□ -1.56
SMC6-203ENST00000402989 IL25Q9H293 177 aa5.32□□□□□ -1.56
SMC6-203ENST00000402989 ZNF330Q9Y3S2 320 aaPredicted RBP5.32□□□□□ -1.56
SMC6-203ENST00000402989 SOS1Q07889 1333 aaPredicted RBP5.31□□□□□ -1.56
SMC6-203ENST00000402989 KCNJ4P48050 445 aa5.31□□□□□ -1.56
SMC6-203ENST00000402989 ATP8B2P98198 1209 aa5.31□□□□□ -1.56
SMC6-203ENST00000402989 RNF214Q8ND24 703 aa5.31□□□□□ -1.56
SMC6-203ENST00000402989 KLHDC4Q8TBB5 520 aa5.31□□□□□ -1.56
SMC6-203ENST00000402989 ANKRD24Q8TF21 1146 aa5.31□□□□□ -1.56
SMC6-203ENST00000402989 DNAAF4Q8WXU2 420 aa5.31□□□□□ -1.56
SMC6-203ENST00000402989 TAOK2Q9UL54 1235 aa5.31□□□□□ -1.56
SMC6-203ENST00000402989 MAP3K2Q9Y2U5 619 aa5.31□□□□□ -1.56
SMC6-203ENST00000402989 GCP02774 474 aa5.31□□□□□ -1.56
SMC6-203ENST00000402989 CHMLP26374 656 aa5.31□□□□□ -1.56
SMC6-203ENST00000402989 MRE11P49959 708 aa5.31□□□□□ -1.56
SMC6-203ENST00000402989 PLEKHO1Q53GL0 409 aaPredicted RBP5.31□□□□□ -1.56
SMC6-203ENST00000402989 TMX3Q96JJ7 454 aa5.31□□□□□ -1.56
SMC6-203ENST00000402989 CCDC8Q9H0W5 538 aaPredicted RBP5.31□□□□□ -1.56
SMC6-203ENST00000402989 CIZ1Q9ULV3 898 aaPredicted RBP5.31□□□□□ -1.56
SMC6-203ENST00000402989 CHMP3Q9Y3E7 222 aa5.31□□□□□ -1.56
SMC6-203ENST00000402989 EIF4A1P60842 406 aaKnown RBP5.3□□□□□ -1.56
SMC6-203ENST00000402989 KIAA1211Q6ZU35 1233 aa5.3□□□□□ -1.56
SMC6-203ENST00000402989 RHPN1Q8TCX5 695 aa5.3□□□□□ -1.56
SMC6-203ENST00000402989 IP6K1Q92551 441 aa5.3□□□□□ -1.56
SMC6-203ENST00000402989 LMTK3Q96Q04 1460 aa5.3□□□□□ -1.56
SMC6-203ENST00000402989 A0A0G2JS52 829 aa5.3□□□□□ -1.56
SMC6-203ENST00000402989 ANP32BQ92688 251 aaKnown RBP5.3□□□□□ -1.56
SMC6-203ENST00000402989 TCEANC2Q96MN5 208 aa5.3□□□□□ -1.56
SMC6-203ENST00000402989 DIAPH3Q9NSV4 1193 aa5.3□□□□□ -1.56
SMC6-203ENST00000402989 AXIN2Q9Y2T1 843 aa5.3□□□□□ -1.56
SMC6-203ENST00000402989 IFIT2P09913 472 aaKnown RBP5.3□□□□□ -1.56
SMC6-203ENST00000402989 DDIT3P35638 169 aa5.3□□□□□ -1.56
SMC6-203ENST00000402989 NUCB2P80303 420 aa5.3□□□□□ -1.56
SMC6-203ENST00000402989 RIC3Q7Z5B4 369 aa5.3□□□□□ -1.56
SMC6-203ENST00000402989 FAM43AQ8N2R8 423 aa5.3□□□□□ -1.56
SMC6-203ENST00000402989 NDUFB9Q9Y6M9 179 aa5.3□□□□□ -1.56
SMC6-203ENST00000402989 PIK3C2AO00443 1686 aa5.29□□□□□ -1.56
SMC6-203ENST00000402989 KDRP35968 1356 aa5.29□□□□□ -1.56
SMC6-203ENST00000402989 SSH2Q76I76 1423 aa5.29□□□□□ -1.56
SMC6-203ENST00000402989 PLCB2Q00722 1185 aa5.29□□□□□ -1.56
SMC6-203ENST00000402989 KRT28Q7Z3Y7 464 aa5.29□□□□□ -1.56
SMC6-203ENST00000402989 AACSQ86V21 672 aa5.29□□□□□ -1.56
SMC6-203ENST00000402989 RAPGEF4Q8WZA2 1011 aa5.29□□□□□ -1.56
SMC6-203ENST00000402989 KIF24Q5T7B8 1368 aa5.29□□□□□ -1.56
SMC6-203ENST00000402989 SYCE3A1L190 88 aa5.29□□□□□ -1.56
SMC6-203ENST00000402989 FSD2A1L4K1 749 aa5.29□□□□□ -1.56
SMC6-203ENST00000402989 NASPP49321 788 aaPredicted RBP5.29□□□□□ -1.56
SMC6-203ENST00000402989 NSFL1CQ9UNZ2 370 aaKnown RBP5.29□□□□□ -1.56
SMC6-203ENST00000402989 IBTKQ9P2D0 1353 aaPredicted RBP5.29□□□□□ -1.56
SMC6-203ENST00000402989 NCOA3Q9Y6Q9 1424 aa5.29□□□□□ -1.56
SMC6-203ENST00000402989 KAT6BQ8WYB5 2073 aa5.29□□□□□ -1.56
SMC6-203ENST00000402989 FMN2Q9NZ56 1722 aa5.28□□□□□ -1.56
SMC6-203ENST00000402989 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.28□□□□□ -1.56
SMC6-203ENST00000402989 ATP5J2-PTCD1G3V325 749 aa5.28□□□□□ -1.56
SMC6-203ENST00000402989 RNMTO43148 476 aaKnown RBP5.28□□□□□ -1.56
SMC6-203ENST00000402989 PTCD1O75127 700 aaKnown RBP5.28□□□□□ -1.56
SMC6-203ENST00000402989 FOSBP53539 338 aa5.28□□□□□ -1.56
SMC6-203ENST00000402989 SKOR2Q2VWA4 1001 aaPredicted RBP5.28□□□□□ -1.56
SMC6-203ENST00000402989 BOLA2Q9H3K6 86 aa5.28□□□□□ -1.56
SMC6-203ENST00000402989 MST1RQ04912 1400 aa5.28□□□□□ -1.56
SMC6-203ENST00000402989 PRPF40BQ6NWY9 871 aaKnown RBP5.28□□□□□ -1.56
SMC6-203ENST00000402989 CLASRPQ8N2M8 674 aaKnown RBP5.28□□□□□ -1.56
SMC6-203ENST00000402989 NFATC2IPQ8NCF5 419 aa5.28□□□□□ -1.56
SMC6-203ENST00000402989 EDC3Q96F86 508 aaKnown RBP5.28□□□□□ -1.56
SMC6-203ENST00000402989 TRPM3Q9HCF6 1732 aaPredicted RBP5.28□□□□□ -1.56
SMC6-203ENST00000402989 HTATSF1O43719 755 aaKnown RBP5.28□□□□□ -1.56
SMC6-203ENST00000402989 CASTP20810 708 aaKnown RBP5.28□□□□□ -1.56
SMC6-203ENST00000402989 ZSCAN23Q3MJ62 389 aa5.28□□□□□ -1.56
SMC6-203ENST00000402989 AKAP4Q5JQC9 854 aa5.28□□□□□ -1.56
SMC6-203ENST00000402989 BEND3Q5T5X7 828 aa5.28□□□□□ -1.56
SMC6-203ENST00000402989 CNTROBQ8N137 903 aa5.28□□□□□ -1.56
SMC6-203ENST00000402989 KCNH5Q8NCM2 988 aa5.28□□□□□ -1.56
SMC6-203ENST00000402989 KIF1BPQ96EK5 621 aa5.28□□□□□ -1.56
SMC6-203ENST00000402989 MYD88Q99836 296 aa5.28□□□□□ -1.56
SMC6-203ENST00000402989 DBF4Q9UBU7 674 aaPredicted RBP5.28□□□□□ -1.56
SMC6-203ENST00000402989 RGPD1P0DJD0 1748 aa5.27□□□□□ -1.57
SMC6-203ENST00000402989 PPFIA3O75145 1194 aa5.27□□□□□ -1.57
SMC6-203ENST00000402989 RASEFQ8IZ41 740 aa5.27□□□□□ -1.57
SMC6-203ENST00000402989 JAKMIP1Q96N16 626 aaKnown RBP5.27□□□□□ -1.57
SMC6-203ENST00000402989 CCDC85AQ96PX6 553 aaPredicted RBP5.27□□□□□ -1.57
SMC6-203ENST00000402989 DNAJC5Q9H3Z4 198 aa5.27□□□□□ -1.57
SMC6-203ENST00000402989 TLR7Q9NYK1 1049 aaKnown RBP5.27□□□□□ -1.57
SMC6-203ENST00000402989 NAP1L2Q9ULW6 460 aaPredicted RBP5.27□□□□□ -1.57
SMC6-203ENST00000402989 ZDHHC9Q9Y397 364 aa5.27□□□□□ -1.57
SMC6-203ENST00000402989 ABCA3Q99758 1704 aa5.27□□□□□ -1.57
SMC6-203ENST00000402989 VPS37CA5D8V6 355 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms