RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 GADD45BO75293 160 aaPredicted RBP20.68■□□□□ 0.9
SNRNP70-202ENST00000401730 ZNF530Q6P9A1 599 aaPredicted RBP20.67■□□□□ 0.9
SNRNP70-202ENST00000401730 PTMSP20962 102 aa20.67■□□□□ 0.9
SNRNP70-202ENST00000401730 MAP3K5Q99683 1374 aa20.67■□□□□ 0.9
SNRNP70-202ENST00000401730 IBTKQ9P2D0 1353 aaPredicted RBP20.67■□□□□ 0.9
SNRNP70-202ENST00000401730 PROSER3Q2NL68 480 aa20.67■□□□□ 0.9
SNRNP70-202ENST00000401730 CWF19L2Q2TBE0 894 aaKnown RBP20.67■□□□□ 0.9
SNRNP70-202ENST00000401730 PIP4K2AP48426 406 aaPredicted RBP20.66■□□□□ 0.9
SNRNP70-202ENST00000401730 CCDC9Q9Y3X0 531 aaKnown RBP20.66■□□□□ 0.9
SNRNP70-202ENST00000401730 BTBD11A6QL63 1104 aa20.65■□□□□ 0.9
SNRNP70-202ENST00000401730 RASEFQ8IZ41 740 aa20.65■□□□□ 0.9
SNRNP70-202ENST00000401730 SIL1Q9H173 461 aa20.65■□□□□ 0.9
SNRNP70-202ENST00000401730 KIAA1211Q6ZU35 1233 aa20.65■□□□□ 0.9
SNRNP70-202ENST00000401730 TBX22Q9Y458 520 aa20.65■□□□□ 0.9
SNRNP70-202ENST00000401730 SALL3Q9BXA9 1300 aa20.65■□□□□ 0.9
SNRNP70-202ENST00000401730 THEMISQ8N1K5 641 aaPredicted RBP20.64■□□□□ 0.9
SNRNP70-202ENST00000401730 C9orf78Q9NZ63 289 aaPredicted RBP20.64■□□□□ 0.9
SNRNP70-202ENST00000401730 PHF8Q9UPP1 1060 aa20.64■□□□□ 0.9
SNRNP70-202ENST00000401730 AKAP12Q02952 1782 aa20.64■□□□□ 0.89
SNRNP70-202ENST00000401730 CCDC173Q0VFZ6 552 aa20.64■□□□□ 0.89
SNRNP70-202ENST00000401730 KDRP35968 1356 aa20.64■□□□□ 0.89
SNRNP70-202ENST00000401730 MSNP26038 577 aaKnown RBP20.64■□□□□ 0.89
SNRNP70-202ENST00000401730 ISY1Q9ULR0 285 aaKnown RBP20.64■□□□□ 0.89
SNRNP70-202ENST00000401730 DNAAF4Q8WXU2 420 aa20.63■□□□□ 0.89
SNRNP70-202ENST00000401730 SSH2Q76I76 1423 aa20.63■□□□□ 0.89
SNRNP70-202ENST00000401730 PLCB2Q00722 1185 aa20.63■□□□□ 0.89
SNRNP70-202ENST00000401730 RGPD8O14715 1765 aaPredicted RBP20.63■□□□□ 0.89
SNRNP70-202ENST00000401730 TCEANC2Q96MN5 208 aa20.62■□□□□ 0.89
SNRNP70-202ENST00000401730 EIF4A1P60842 406 aaKnown RBP20.62■□□□□ 0.89
SNRNP70-202ENST00000401730 CLEC17AQ6ZS10 378 aa20.62■□□□□ 0.89
SNRNP70-202ENST00000401730 KLHDC4Q8TBB5 520 aa20.62■□□□□ 0.89
SNRNP70-202ENST00000401730 CHMP3Q9Y3E7 222 aa20.62■□□□□ 0.89
SNRNP70-202ENST00000401730 SSH3Q8TE77 659 aa20.61■□□□□ 0.89
SNRNP70-202ENST00000401730 MAP3K2Q9Y2U5 619 aa20.61■□□□□ 0.89
SNRNP70-202ENST00000401730 ORAI2Q96SN7 254 aa20.6■□□□□ 0.89
SNRNP70-202ENST00000401730 SLC39A6Q13433 755 aa20.6■□□□□ 0.89
SNRNP70-202ENST00000401730 CCDC8Q9H0W5 538 aaPredicted RBP20.6■□□□□ 0.89
SNRNP70-202ENST00000401730 TRHP20396 242 aaPredicted RBP20.6■□□□□ 0.89
SNRNP70-202ENST00000401730 ZNF445P59923 1031 aa20.6■□□□□ 0.89
SNRNP70-202ENST00000401730 FAM13BQ9NYF5 915 aa20.6■□□□□ 0.89
SNRNP70-202ENST00000401730 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.6■□□□□ 0.89
SNRNP70-202ENST00000401730 USP48Q86UV5 1035 aa20.59■□□□□ 0.89
SNRNP70-202ENST00000401730 PI4K2BQ8TCG2 481 aa20.59■□□□□ 0.89
SNRNP70-202ENST00000401730 FIBPO43427 364 aa20.59■□□□□ 0.89
SNRNP70-202ENST00000401730 BRD1O95696 1058 aa20.59■□□□□ 0.89
SNRNP70-202ENST00000401730 MYL6BP14649 208 aa20.59■□□□□ 0.89
SNRNP70-202ENST00000401730 CASTP20810 708 aaKnown RBP20.59■□□□□ 0.89
SNRNP70-202ENST00000401730 CNPY2Q9Y2B0 182 aa20.59■□□□□ 0.89
SNRNP70-202ENST00000401730 KCNJ4P48050 445 aa20.58■□□□□ 0.89
SNRNP70-202ENST00000401730 AK2P54819 239 aa20.58■□□□□ 0.89
SNRNP70-202ENST00000401730 COL9A3Q14050 684 aaPredicted RBP20.58■□□□□ 0.89
SNRNP70-202ENST00000401730 PRPF40BQ6NWY9 871 aaKnown RBP20.58■□□□□ 0.89
SNRNP70-202ENST00000401730 DIAPH3Q9NSV4 1193 aa20.58■□□□□ 0.89
SNRNP70-202ENST00000401730 NRKQ7Z2Y5 1582 aa20.58■□□□□ 0.89
SNRNP70-202ENST00000401730 LARGE1O95461 756 aa20.58■□□□□ 0.88
SNRNP70-202ENST00000401730 ZC3H6P61129 1189 aaKnown RBP20.58■□□□□ 0.88
SNRNP70-202ENST00000401730 BEND3Q5T5X7 828 aa20.58■□□□□ 0.88
SNRNP70-202ENST00000401730 SNX14Q9Y5W7 946 aa20.58■□□□□ 0.88
SNRNP70-202ENST00000401730 PTH1RQ03431 593 aa20.58■□□□□ 0.88
SNRNP70-202ENST00000401730 ZSCAN30Q86W11 494 aa20.58■□□□□ 0.88
SNRNP70-202ENST00000401730 CCDC83Q8IWF9 413 aa20.58■□□□□ 0.88
SNRNP70-202ENST00000401730 KIF1BPQ96EK5 621 aa20.58■□□□□ 0.88
SNRNP70-202ENST00000401730 UBR1Q8IWV7 1749 aa20.57■□□□□ 0.88
SNRNP70-202ENST00000401730 PTMAP06454 111 aaKnown RBP20.57■□□□□ 0.88
SNRNP70-202ENST00000401730 STAP2Q9UGK3 403 aa20.57■□□□□ 0.88
SNRNP70-202ENST00000401730 HTATSF1O43719 755 aaKnown RBP20.57■□□□□ 0.88
SNRNP70-202ENST00000401730 ADCK5Q3MIX3 580 aa20.57■□□□□ 0.88
SNRNP70-202ENST00000401730 NECAB1Q8N987 351 aa20.57■□□□□ 0.88
SNRNP70-202ENST00000401730 NDUFB9Q9Y6M9 179 aa20.57■□□□□ 0.88
SNRNP70-202ENST00000401730 AACSQ86V21 672 aa20.56■□□□□ 0.88
SNRNP70-202ENST00000401730 CNTROBQ8N137 903 aa20.56■□□□□ 0.88
SNRNP70-202ENST00000401730 R3HCC1Q9Y3T6 440 aaKnown RBP20.56■□□□□ 0.88
SNRNP70-202ENST00000401730 C1orf141Q5JVX7 400 aa20.56■□□□□ 0.88
SNRNP70-202ENST00000401730 PPP1R9BQ96SB3 815 aa20.56■□□□□ 0.88
SNRNP70-202ENST00000401730 SGSM2O43147 1006 aa20.55■□□□□ 0.88
SNRNP70-202ENST00000401730 IFIT2P09913 472 aaKnown RBP20.55■□□□□ 0.88
SNRNP70-202ENST00000401730 LRSAM1Q6UWE0 723 aa20.55■□□□□ 0.88
SNRNP70-202ENST00000401730 JAKMIP1Q96N16 626 aaKnown RBP20.55■□□□□ 0.88
SNRNP70-202ENST00000401730 ZNF830Q96NB3 372 aaPredicted RBP20.55■□□□□ 0.88
SNRNP70-202ENST00000401730 HSPA4P34932 840 aa20.55■□□□□ 0.88
SNRNP70-202ENST00000401730 IP6K1Q92551 441 aa20.55■□□□□ 0.88
SNRNP70-202ENST00000401730 CLASRPQ8N2M8 674 aaKnown RBP20.54■□□□□ 0.88
SNRNP70-202ENST00000401730 EDC3Q96F86 508 aaKnown RBP20.54■□□□□ 0.88
SNRNP70-202ENST00000401730 REREQ9P2R6 1566 aa20.54■□□□□ 0.88
SNRNP70-202ENST00000401730 BOLA2Q9H3K6 86 aa20.54■□□□□ 0.88
SNRNP70-202ENST00000401730 VPS37CA5D8V6 355 aaPredicted RBP20.53■□□□□ 0.88
SNRNP70-202ENST00000401730 CUL4AQ13619 759 aa20.53■□□□□ 0.88
SNRNP70-202ENST00000401730 RUFY3Q7L099 469 aa20.53■□□□□ 0.88
SNRNP70-202ENST00000401730 FERMT3Q86UX7 667 aa20.53■□□□□ 0.88
SNRNP70-202ENST00000401730 FAM173BQ6P4H8 233 aa20.53■□□□□ 0.88
SNRNP70-202ENST00000401730 DDX17Q92841 729 aaKnown RBP20.53■□□□□ 0.88
SNRNP70-202ENST00000401730 FAM227BQ96M60 508 aa20.53■□□□□ 0.88
SNRNP70-202ENST00000401730 DIP2AQ14689 1571 aa20.53■□□□□ 0.88
SNRNP70-202ENST00000401730 MCM2P49736 904 aa20.53■□□□□ 0.88
SNRNP70-202ENST00000401730 TLR7Q9NYK1 1049 aaKnown RBP20.53■□□□□ 0.88
SNRNP70-202ENST00000401730 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.52■□□□□ 0.88
SNRNP70-202ENST00000401730 LSG1Q9H089 658 aaKnown RBP20.52■□□□□ 0.88
SNRNP70-202ENST00000401730 SMC3Q9UQE7 1217 aa20.52■□□□□ 0.88
SNRNP70-202ENST00000401730 AXIN2Q9Y2T1 843 aa20.52■□□□□ 0.88
SNRNP70-202ENST00000401730 CHGBP05060 677 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms