RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 ATP8B2P98198 1209 aa18.58■□□□□ 0.56
COL25A1-203ENST00000399132 BEND3Q5T5X7 828 aa18.58■□□□□ 0.56
COL25A1-203ENST00000399132 IFNL2Q8IZJ0 200 aa18.58■□□□□ 0.56
COL25A1-203ENST00000399132 CDC45O75419 566 aa18.57■□□□□ 0.56
COL25A1-203ENST00000399132 SURF6O75683 361 aaKnown RBP18.57■□□□□ 0.56
COL25A1-203ENST00000399132 DCCP43146 1447 aa18.57■□□□□ 0.56
COL25A1-203ENST00000399132 NUTM1Q86Y26 1132 aa18.57■□□□□ 0.56
COL25A1-203ENST00000399132 LRRCC1Q9C099 1032 aa18.57■□□□□ 0.56
COL25A1-203ENST00000399132 ADCY9O60503 1353 aa18.56■□□□□ 0.56
COL25A1-203ENST00000399132 KDM6AO15550 1401 aaPredicted RBP18.56■□□□□ 0.56
COL25A1-203ENST00000399132 MAP4K4O95819 1239 aaPredicted RBP18.56■□□□□ 0.56
COL25A1-203ENST00000399132 C9orf78Q9NZ63 289 aaPredicted RBP18.56■□□□□ 0.56
COL25A1-203ENST00000399132 USP16Q9Y5T5 823 aa18.56■□□□□ 0.56
COL25A1-203ENST00000399132 GSE1Q14687 1217 aa18.56■□□□□ 0.56
COL25A1-203ENST00000399132 PHRF1Q9P1Y6 1649 aaKnown RBP18.55■□□□□ 0.56
COL25A1-203ENST00000399132 TTC5Q8N0Z6 440 aa18.55■□□□□ 0.56
COL25A1-203ENST00000399132 CABP4P57796 275 aa18.55■□□□□ 0.56
COL25A1-203ENST00000399132 EVA1CP58658 441 aa18.55■□□□□ 0.56
COL25A1-203ENST00000399132 PDE1AP54750 535 aa18.54■□□□□ 0.56
COL25A1-203ENST00000399132 RILPL2Q969X0 211 aa18.54■□□□□ 0.56
COL25A1-203ENST00000399132 LMO7Q8WWI1 1683 aa18.54■□□□□ 0.56
COL25A1-203ENST00000399132 TRIM6-TRIM34B2RNG4 842 aa18.54■□□□□ 0.56
COL25A1-203ENST00000399132 LARP1Q6PKG0 1096 aaKnown RBP18.54■□□□□ 0.56
COL25A1-203ENST00000399132 STRCQ7RTU9 1775 aa18.53■□□□□ 0.56
COL25A1-203ENST00000399132 NCAPD2Q15021 1401 aa18.53■□□□□ 0.56
COL25A1-203ENST00000399132 HOXB7P09629 217 aa18.53■□□□□ 0.56
COL25A1-203ENST00000399132 RIC3Q7Z5B4 369 aa18.53■□□□□ 0.56
COL25A1-203ENST00000399132 XIRP1Q702N8 1843 aaKnown RBP18.53■□□□□ 0.56
COL25A1-203ENST00000399132 PTCD1O75127 700 aaKnown RBP18.52■□□□□ 0.56
COL25A1-203ENST00000399132 CD2BP2O95400 341 aaKnown RBP18.52■□□□□ 0.56
COL25A1-203ENST00000399132 PA2G4Q9UQ80 394 aaKnown RBP18.52■□□□□ 0.56
COL25A1-203ENST00000399132 SOS1Q07889 1333 aaPredicted RBP18.52■□□□□ 0.56
COL25A1-203ENST00000399132 OS9Q13438 667 aaPredicted RBP18.52■□□□□ 0.56
COL25A1-203ENST00000399132 KDM3BQ7LBC6 1761 aa18.52■□□□□ 0.55
COL25A1-203ENST00000399132 PDIA6Q15084 440 aa18.51■□□□□ 0.55
COL25A1-203ENST00000399132 COPS6Q7L5N1 327 aa18.51■□□□□ 0.55
COL25A1-203ENST00000399132 XAGE3Q8WTP9 111 aa18.51■□□□□ 0.55
COL25A1-203ENST00000399132 KSR2Q6VAB6 950 aa18.51■□□□□ 0.55
COL25A1-203ENST00000399132 HSCBQ8IWL3 235 aa18.51■□□□□ 0.55
COL25A1-203ENST00000399132 MX1P20591 662 aa18.5■□□□□ 0.55
COL25A1-203ENST00000399132 FAM43AQ8N2R8 423 aa18.5■□□□□ 0.55
COL25A1-203ENST00000399132 DCAF5Q96JK2 942 aa18.5■□□□□ 0.55
COL25A1-203ENST00000399132 KIF2CQ99661 725 aa18.5■□□□□ 0.55
COL25A1-203ENST00000399132 ZNF330Q9Y3S2 320 aaPredicted RBP18.5■□□□□ 0.55
COL25A1-203ENST00000399132 NCOA3Q9Y6Q9 1424 aa18.5■□□□□ 0.55
COL25A1-203ENST00000399132 TULP1O00294 542 aaPredicted RBP18.49■□□□□ 0.55
COL25A1-203ENST00000399132 UNC5CLQ8IV45 518 aa18.49■□□□□ 0.55
COL25A1-203ENST00000399132 ZCRB1Q8TBF4 217 aaKnown RBP18.49■□□□□ 0.55
COL25A1-203ENST00000399132 DDX21Q9NR30 783 aaKnown RBP eCLIP18.49■□□□□ 0.55
COL25A1-203ENST00000399132 SOS2Q07890 1332 aaPredicted RBP18.49■□□□□ 0.55
COL25A1-203ENST00000399132 RBM25P49756 843 aaKnown RBP18.49■□□□□ 0.55
COL25A1-203ENST00000399132 MYD88Q99836 296 aa18.49■□□□□ 0.55
COL25A1-203ENST00000399132 HYPKQ9NX55 129 aa18.49■□□□□ 0.55
COL25A1-203ENST00000399132 IBTKQ9P2D0 1353 aaPredicted RBP18.48■□□□□ 0.55
COL25A1-203ENST00000399132 ATP5J2-PTCD1G3V325 749 aa18.48■□□□□ 0.55
COL25A1-203ENST00000399132 KLHDC4Q8TBB5 520 aa18.48■□□□□ 0.55
COL25A1-203ENST00000399132 SIL1Q9H173 461 aa18.48■□□□□ 0.55
COL25A1-203ENST00000399132 CAMTA1Q9Y6Y1 1673 aa18.48■□□□□ 0.55
COL25A1-203ENST00000399132 WDR17Q8IZU2 1322 aa18.48■□□□□ 0.55
COL25A1-203ENST00000399132 SSH3Q8TE77 659 aa18.48■□□□□ 0.55
COL25A1-203ENST00000399132 COL18A1P39060 1754 aa18.47■□□□□ 0.55
COL25A1-203ENST00000399132 RHPN1Q8TCX5 695 aa18.46■□□□□ 0.55
COL25A1-203ENST00000399132 HEG1Q9ULI3 1381 aa18.46■□□□□ 0.55
COL25A1-203ENST00000399132 HSP90AB1P08238 724 aaKnown RBP18.46■□□□□ 0.55
COL25A1-203ENST00000399132 SUCLG2Q96I99 432 aa18.46■□□□□ 0.55
COL25A1-203ENST00000399132 BTG4Q9NY30 223 aa18.46■□□□□ 0.55
COL25A1-203ENST00000399132 A0A0G2JS52 829 aa18.45■□□□□ 0.54
COL25A1-203ENST00000399132 DDX58O95786 925 aaKnown RBP18.45■□□□□ 0.54
COL25A1-203ENST00000399132 IGKV5-2P06315 115 aa18.45■□□□□ 0.54
COL25A1-203ENST00000399132 HSP90AA1P07900 732 aaKnown RBP18.45■□□□□ 0.54
COL25A1-203ENST00000399132 SNRPA1P09661 255 aaKnown RBP18.45■□□□□ 0.54
COL25A1-203ENST00000399132 CASC1Q6TDU7 716 aa18.45■□□□□ 0.54
COL25A1-203ENST00000399132 FMNL2Q96PY5 1086 aa18.45■□□□□ 0.54
COL25A1-203ENST00000399132 BICC1Q9H694 974 aaKnown RBP18.45■□□□□ 0.54
COL25A1-203ENST00000399132 ANTXR1Q9H6X2 564 aa18.45■□□□□ 0.54
COL25A1-203ENST00000399132 KAT6BQ8WYB5 2073 aa18.45■□□□□ 0.54
COL25A1-203ENST00000399132 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.44■□□□□ 0.54
COL25A1-203ENST00000399132 CPDO75976 1380 aa18.44■□□□□ 0.54
COL25A1-203ENST00000399132 CACNA1FO60840 1977 aa18.44■□□□□ 0.54
COL25A1-203ENST00000399132 IL2RBP14784 551 aa18.44■□□□□ 0.54
COL25A1-203ENST00000399132 CHMP4AQ9BY43 222 aa18.44■□□□□ 0.54
COL25A1-203ENST00000399132 GRM8O00222 908 aa18.43■□□□□ 0.54
COL25A1-203ENST00000399132 USP26Q9BXU7 913 aa18.43■□□□□ 0.54
COL25A1-203ENST00000399132 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.43■□□□□ 0.54
COL25A1-203ENST00000399132 PXDNLA1KZ92 1463 aa18.43■□□□□ 0.54
COL25A1-203ENST00000399132 A1BGP04217 495 aa18.43■□□□□ 0.54
COL25A1-203ENST00000399132 POLA2Q14181 598 aa18.43■□□□□ 0.54
COL25A1-203ENST00000399132 ANKRD13DQ6ZTN6 518 aa18.43■□□□□ 0.54
COL25A1-203ENST00000399132 LINS1Q8NG48 757 aa18.43■□□□□ 0.54
COL25A1-203ENST00000399132 NEXNQ0ZGT2 675 aa18.42■□□□□ 0.54
COL25A1-203ENST00000399132 KAZALD1Q96I82 304 aa18.42■□□□□ 0.54
COL25A1-203ENST00000399132 COL5A2P05997 1499 aaPredicted RBP18.41■□□□□ 0.54
COL25A1-203ENST00000399132 SALL3Q9BXA9 1300 aa18.41■□□□□ 0.54
COL25A1-203ENST00000399132 EPHA10Q5JZY3 1008 aa18.41■□□□□ 0.54
COL25A1-203ENST00000399132 PCDH11XQ9BZA7 1347 aa18.41■□□□□ 0.54
COL25A1-203ENST00000399132 PCDH11YQ9BZA8 1340 aa18.41■□□□□ 0.54
COL25A1-203ENST00000399132 OVOS2A0A0G2JMS6 1433 aa18.4■□□□□ 0.54
COL25A1-203ENST00000399132 IL25Q9H293 177 aa18.4■□□□□ 0.54
COL25A1-203ENST00000399132 ANO2Q9NQ90 1003 aa18.4■□□□□ 0.54
COL25A1-203ENST00000399132 CCDC9Q9Y3X0 531 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms