RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TAX1BP1Q86VP1 789 aa12.11□□□□□ -0.47
COL4A6-203ENST00000394872 GBP2P32456 591 aaPredicted RBP12.11□□□□□ -0.47
COL4A6-203ENST00000394872 CCDC82Q8N4S0 544 aa12.11□□□□□ -0.47
COL4A6-203ENST00000394872 BACH2Q9BYV9 841 aa12.11□□□□□ -0.47
COL4A6-203ENST00000394872 DBF4Q9UBU7 674 aaPredicted RBP12.11□□□□□ -0.47
COL4A6-203ENST00000394872 CCDC112Q8NEF3 446 aa12.11□□□□□ -0.47
COL4A6-203ENST00000394872 NAIPQ13075 1403 aa12.11□□□□□ -0.47
COL4A6-203ENST00000394872 ERLIN1O75477 346 aa12.11□□□□□ -0.47
COL4A6-203ENST00000394872 SSRP1Q08945 709 aaKnown RBP12.11□□□□□ -0.47
COL4A6-203ENST00000394872 CAMK4Q16566 473 aa12.11□□□□□ -0.47
COL4A6-203ENST00000394872 RNF41Q9H4P4 317 aaPredicted RBP12.11□□□□□ -0.47
COL4A6-203ENST00000394872 RFC4P35249 363 aa12.1□□□□□ -0.47
COL4A6-203ENST00000394872 DDX46Q7L014 1031 aaKnown RBP12.1□□□□□ -0.47
COL4A6-203ENST00000394872 ZNF622Q969S3 477 aaKnown RBP eCLIP12.1□□□□□ -0.47
COL4A6-203ENST00000394872 ABCC11Q96J66 1382 aa12.1□□□□□ -0.47
COL4A6-203ENST00000394872 TMEM266Q2M3C6 531 aa12.1□□□□□ -0.47
COL4A6-203ENST00000394872 MAP3K2Q9Y2U5 619 aa12.1□□□□□ -0.47
COL4A6-203ENST00000394872 CDC5LQ99459 802 aaKnown RBP12.1□□□□□ -0.47
COL4A6-203ENST00000394872 TEX13AQ9BXU3 409 aaPredicted RBP12.1□□□□□ -0.47
COL4A6-203ENST00000394872 CFAP100Q494V2 611 aa12.1□□□□□ -0.47
COL4A6-203ENST00000394872 FERMT3Q86UX7 667 aa12.1□□□□□ -0.47
COL4A6-203ENST00000394872 IFNL2Q8IZJ0 200 aa12.1□□□□□ -0.47
COL4A6-203ENST00000394872 SSH1Q8WYL5 1049 aa12.1□□□□□ -0.47
COL4A6-203ENST00000394872 HMGB1P09429 215 aaKnown RBP12.1□□□□□ -0.47
COL4A6-203ENST00000394872 NLRP5P59047 1200 aa12.1□□□□□ -0.47
COL4A6-203ENST00000394872 FAM193AP78312 1265 aa12.1□□□□□ -0.47
COL4A6-203ENST00000394872 MAP3K11Q16584 847 aa12.1□□□□□ -0.47
COL4A6-203ENST00000394872 C8orf76Q96K31 380 aa12.1□□□□□ -0.47
COL4A6-203ENST00000394872 PHAXQ9H814 394 aaKnown RBP12.1□□□□□ -0.47
COL4A6-203ENST00000394872 IFIT3O14879 490 aaKnown RBP12.1□□□□□ -0.47
COL4A6-203ENST00000394872 FEZ1Q99689 392 aa12.1□□□□□ -0.47
COL4A6-203ENST00000394872 RAB34Q9BZG1 259 aa12.1□□□□□ -0.47
COL4A6-203ENST00000394872 GRPEL1Q9HAV7 217 aa12.1□□□□□ -0.47
COL4A6-203ENST00000394872 GUCY1B3Q02153 619 aa12.09□□□□□ -0.47
COL4A6-203ENST00000394872 FILIP1Q7Z7B0 1213 aa12.09□□□□□ -0.47
COL4A6-203ENST00000394872 CATIPQ7Z7H3 387 aa12.09□□□□□ -0.47
COL4A6-203ENST00000394872 PTPN23Q9H3S7 1636 aa12.09□□□□□ -0.47
COL4A6-203ENST00000394872 PRKCSHP14314 528 aaPredicted RBP12.09□□□□□ -0.47
COL4A6-203ENST00000394872 CCDC97Q96F63 343 aaPredicted RBP12.09□□□□□ -0.47
COL4A6-203ENST00000394872 GOLGA8AA7E2F4 631 aa12.09□□□□□ -0.47
COL4A6-203ENST00000394872 GOLGA8BA8MQT2 603 aa12.09□□□□□ -0.47
COL4A6-203ENST00000394872 ST5P78524 1137 aa12.09□□□□□ -0.47
COL4A6-203ENST00000394872 CCDC184Q52MB2 194 aa12.09□□□□□ -0.47
COL4A6-203ENST00000394872 CWC25Q9NXE8 425 aaPredicted RBP12.09□□□□□ -0.47
COL4A6-203ENST00000394872 WDR97A6NE52 1622 aa12.09□□□□□ -0.47
COL4A6-203ENST00000394872 PPP1R42Q7Z4L9 355 aa12.09□□□□□ -0.47
COL4A6-203ENST00000394872 CETN2P41208 172 aa12.08□□□□□ -0.48
COL4A6-203ENST00000394872 FKBP15Q5T1M5 1219 aa12.08□□□□□ -0.48
COL4A6-203ENST00000394872 KLHL10Q6JEL2 608 aa12.08□□□□□ -0.48
COL4A6-203ENST00000394872 PCF11O94913 1555 aaKnown RBP12.08□□□□□ -0.48
COL4A6-203ENST00000394872 EIF3JO75822 258 aaKnown RBP12.08□□□□□ -0.48
COL4A6-203ENST00000394872 CCDC150Q8NCX0 1101 aa12.08□□□□□ -0.48
COL4A6-203ENST00000394872 CIZ1Q9ULV3 898 aaPredicted RBP12.08□□□□□ -0.48
COL4A6-203ENST00000394872 ADGRF5Q8IZF2 1346 aa12.08□□□□□ -0.48
COL4A6-203ENST00000394872 LIG1P18858 919 aa12.08□□□□□ -0.48
COL4A6-203ENST00000394872 TMEM87AQ8NBN3 555 aa12.08□□□□□ -0.48
COL4A6-203ENST00000394872 TTC21BQ7Z4L5 1316 aa12.08□□□□□ -0.48
COL4A6-203ENST00000394872 PLB1Q6P1J6 1458 aa12.08□□□□□ -0.48
COL4A6-203ENST00000394872 SPDYE4A6NLX3 237 aa12.08□□□□□ -0.48
COL4A6-203ENST00000394872 CCDC194A0A1B0GVG4 234 aa12.08□□□□□ -0.48
COL4A6-203ENST00000394872 TTF1Q15361 905 aaPredicted RBP12.08□□□□□ -0.48
COL4A6-203ENST00000394872 ANKRD24Q8TF21 1146 aa12.08□□□□□ -0.48
COL4A6-203ENST00000394872 CCDC66A2RUB6 948 aa12.07□□□□□ -0.48
COL4A6-203ENST00000394872 RARSP54136 660 aaKnown RBP12.07□□□□□ -0.48
COL4A6-203ENST00000394872 IDI1Q13907 227 aa12.07□□□□□ -0.48
COL4A6-203ENST00000394872 ATP5J2-PTCD1G3V325 749 aa12.07□□□□□ -0.48
COL4A6-203ENST00000394872 KIAA0754O94854 1291 aa12.07□□□□□ -0.48
COL4A6-203ENST00000394872 BAG4O95429 457 aaKnown RBP12.07□□□□□ -0.48
COL4A6-203ENST00000394872 EZRP15311 586 aaKnown RBP12.07□□□□□ -0.48
COL4A6-203ENST00000394872 ARHGAP29Q52LW3 1261 aa12.07□□□□□ -0.48
COL4A6-203ENST00000394872 SLC4A8Q2Y0W8 1093 aa12.07□□□□□ -0.48
COL4A6-203ENST00000394872 LDHAL6AQ6ZMR3 332 aa12.07□□□□□ -0.48
COL4A6-203ENST00000394872 PTPRCP08575 1304 aa12.07□□□□□ -0.48
COL4A6-203ENST00000394872 RBM10P98175 930 aaKnown RBP12.07□□□□□ -0.48
COL4A6-203ENST00000394872 SPA17Q15506 151 aa12.07□□□□□ -0.48
COL4A6-203ENST00000394872 CACNA2D4Q7Z3S7 1137 aa12.07□□□□□ -0.48
COL4A6-203ENST00000394872 CCDC148Q8NFR7 591 aa12.07□□□□□ -0.48
COL4A6-203ENST00000394872 CABP5Q9NP86 173 aa12.07□□□□□ -0.48
COL4A6-203ENST00000394872 BAG3O95817 575 aa12.07□□□□□ -0.48
COL4A6-203ENST00000394872 LDHCP07864 332 aa12.07□□□□□ -0.48
COL4A6-203ENST00000394872 CHRNA2Q15822 529 aa12.07□□□□□ -0.48
COL4A6-203ENST00000394872 GOLIM4O00461 696 aa12.06□□□□□ -0.48
COL4A6-203ENST00000394872 FLIIQ13045 1269 aa12.06□□□□□ -0.48
COL4A6-203ENST00000394872 SH2B1Q9NRF2 756 aaPredicted RBP12.06□□□□□ -0.48
COL4A6-203ENST00000394872 VAT1LQ9HCJ6 419 aa12.06□□□□□ -0.48
COL4A6-203ENST00000394872 NKTRP30414 1462 aaKnown RBP12.06□□□□□ -0.48
COL4A6-203ENST00000394872 CUL7Q14999 1698 aa12.06□□□□□ -0.48
COL4A6-203ENST00000394872 NOS1P29475 1434 aa12.06□□□□□ -0.48
COL4A6-203ENST00000394872 HLA-DOAP06340 250 aa12.06□□□□□ -0.48
COL4A6-203ENST00000394872 PPM1FP49593 454 aaPredicted RBP12.06□□□□□ -0.48
COL4A6-203ENST00000394872 DENND4BO75064 1496 aaPredicted RBP12.06□□□□□ -0.48
COL4A6-203ENST00000394872 FGFR1OPO95684 399 aaKnown RBP12.06□□□□□ -0.48
COL4A6-203ENST00000394872 PLCD4Q9BRC7 762 aa12.06□□□□□ -0.48
COL4A6-203ENST00000394872 ANAPC15P60006 121 aa12.06□□□□□ -0.48
COL4A6-203ENST00000394872 CCT2P78371 535 aaKnown RBP12.06□□□□□ -0.48
COL4A6-203ENST00000394872 SPTY2D1Q68D10 685 aaPredicted RBP12.06□□□□□ -0.48
COL4A6-203ENST00000394872 GOLGA6L7A0A1B0GV03 622 aa12.05□□□□□ -0.48
COL4A6-203ENST00000394872 MYO1BO43795 1136 aa12.05□□□□□ -0.48
COL4A6-203ENST00000394872 EVI5LQ96CN4 794 aa12.05□□□□□ -0.48
COL4A6-203ENST00000394872 BRPF3Q9ULD4 1205 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms