RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 HCN2Q9UL51 889 aa7.44□□□□□ -1.22
TRAV40-201ENST00000390467 BNIP3LO60238 219 aa7.43□□□□□ -1.22
TRAV40-201ENST00000390467 DKK1O94907 266 aa7.43□□□□□ -1.22
TRAV40-201ENST00000390467 TXLNAP40222 546 aa7.43□□□□□ -1.22
TRAV40-201ENST00000390467 EFHC2Q5JST6 749 aa7.43□□□□□ -1.22
TRAV40-201ENST00000390467 SLC9A9Q8IVB4 645 aa7.43□□□□□ -1.22
TRAV40-201ENST00000390467 C1orf216Q8TAB5 229 aa7.43□□□□□ -1.22
TRAV40-201ENST00000390467 PALM3A6NDB9 673 aaPredicted RBP7.42□□□□□ -1.22
TRAV40-201ENST00000390467 ATP1A2P50993 1020 aa7.42□□□□□ -1.22
TRAV40-201ENST00000390467 SH3PXD2AQ5TCZ1 1133 aa7.42□□□□□ -1.22
TRAV40-201ENST00000390467 KLRG1Q96E93 195 aa7.42□□□□□ -1.22
TRAV40-201ENST00000390467 ATXN7L1Q9ULK2 861 aaPredicted RBP7.42□□□□□ -1.22
TRAV40-201ENST00000390467 A0A1W2PNR3 127 aa7.41□□□□□ -1.22
TRAV40-201ENST00000390467 SFI1A8K8P3 1242 aa7.41□□□□□ -1.22
TRAV40-201ENST00000390467 C2CD2LO14523 706 aa7.41□□□□□ -1.22
TRAV40-201ENST00000390467 NBPF1Q3BBV0 1214 aa7.41□□□□□ -1.22
TRAV40-201ENST00000390467 SIX5Q8N196 739 aa7.41□□□□□ -1.22
TRAV40-201ENST00000390467 CALR3Q96L12 384 aaKnown RBP7.41□□□□□ -1.22
TRAV40-201ENST00000390467 PPP1R12CQ9BZL4 782 aa7.41□□□□□ -1.22
TRAV40-201ENST00000390467 ZCCHC2Q9C0B9 1178 aaKnown RBP7.41□□□□□ -1.22
TRAV40-201ENST00000390467 TSPAN10Q9H1Z9 355 aaPredicted RBP7.41□□□□□ -1.22
TRAV40-201ENST00000390467 ZDHHC3Q9NYG2 299 aa7.41□□□□□ -1.22
TRAV40-201ENST00000390467 BCRP11274 1271 aa7.4□□□□□ -1.22
TRAV40-201ENST00000390467 MAP3K10Q02779 954 aa7.4□□□□□ -1.22
TRAV40-201ENST00000390467 KCNMA1Q12791 1236 aa7.4□□□□□ -1.22
TRAV40-201ENST00000390467 NLRP8Q86W28 1048 aa7.4□□□□□ -1.22
TRAV40-201ENST00000390467 LARGE2Q8N3Y3 721 aa7.4□□□□□ -1.22
TRAV40-201ENST00000390467 TSEN2Q8NCE0 465 aaKnown RBP7.4□□□□□ -1.22
TRAV40-201ENST00000390467 L3MBTL2Q969R5 705 aa7.4□□□□□ -1.22
TRAV40-201ENST00000390467 ZIC5Q96T25 663 aa7.4□□□□□ -1.22
TRAV40-201ENST00000390467 DCDC2BA2VCK2 349 aa7.39□□□□□ -1.23
TRAV40-201ENST00000390467 TATP17735 454 aaPredicted RBP7.39□□□□□ -1.23
TRAV40-201ENST00000390467 FGFR3P22607 806 aa7.39□□□□□ -1.23
TRAV40-201ENST00000390467 CTBSQ01459 385 aa7.39□□□□□ -1.23
TRAV40-201ENST00000390467 TEAD4Q15561 434 aa7.39□□□□□ -1.23
TRAV40-201ENST00000390467 ARSJQ5FYB0 599 aaPredicted RBP7.39□□□□□ -1.23
TRAV40-201ENST00000390467 C1orf229Q6ZS94 237 aaPredicted RBP7.39□□□□□ -1.23
TRAV40-201ENST00000390467 OXCT2Q9BYC2 517 aaPredicted RBP7.39□□□□□ -1.23
TRAV40-201ENST00000390467 NSFL1CQ9UNZ2 370 aaKnown RBP7.39□□□□□ -1.23
TRAV40-201ENST00000390467 PHF24Q9UPV7 400 aa7.39□□□□□ -1.23
TRAV40-201ENST00000390467 EML1O00423 815 aa7.38□□□□□ -1.23
TRAV40-201ENST00000390467 ATXN7O15265 892 aaPredicted RBP7.38□□□□□ -1.23
TRAV40-201ENST00000390467 RASA1P20936 1047 aa7.38□□□□□ -1.23
TRAV40-201ENST00000390467 NOS2P35228 1153 aa7.38□□□□□ -1.23
TRAV40-201ENST00000390467 MAP2K3P46734 347 aa7.38□□□□□ -1.23
TRAV40-201ENST00000390467 CRTC2Q53ET0 693 aaPredicted RBP7.38□□□□□ -1.23
TRAV40-201ENST00000390467 FIGNL1Q6PIW4 674 aa7.38□□□□□ -1.23
TRAV40-201ENST00000390467 ZNF777Q9ULD5 760 aaPredicted RBP7.38□□□□□ -1.23
TRAV40-201ENST00000390467 PCDHGC4Q9Y5F7 938 aa7.38□□□□□ -1.23
TRAV40-201ENST00000390467 SHISA8B8ZZ34 492 aa7.37□□□□□ -1.23
TRAV40-201ENST00000390467 C21orf2O43822 256 aa7.37□□□□□ -1.23
TRAV40-201ENST00000390467 BMP4P12644 408 aa7.37□□□□□ -1.23
TRAV40-201ENST00000390467 KANK4Q5T7N3 995 aaPredicted RBP7.37□□□□□ -1.23
TRAV40-201ENST00000390467 C7orf43Q8WVR3 580 aa7.37□□□□□ -1.23
TRAV40-201ENST00000390467 ZNF232Q9UNY5 417 aa7.37□□□□□ -1.23
TRAV40-201ENST00000390467 SERTM1A2A2V5 107 aa7.36□□□□□ -1.23
TRAV40-201ENST00000390467 M0R2N6 131 aa7.36□□□□□ -1.23
TRAV40-201ENST00000390467 OIP5O43482 229 aa7.36□□□□□ -1.23
TRAV40-201ENST00000390467 MAPTP10636 758 aaKnown RBP7.36□□□□□ -1.23
TRAV40-201ENST00000390467 CD33P20138 364 aa7.36□□□□□ -1.23
TRAV40-201ENST00000390467 MARSP56192 900 aaKnown RBP7.36□□□□□ -1.23
TRAV40-201ENST00000390467 RASSF7Q02833 373 aa7.36□□□□□ -1.23
TRAV40-201ENST00000390467 TNP2Q05952 138 aa7.36□□□□□ -1.23
TRAV40-201ENST00000390467 CFAP70Q5T0N1 1121 aa7.36□□□□□ -1.23
TRAV40-201ENST00000390467 POTEAQ6S8J7 498 aa7.36□□□□□ -1.23
TRAV40-201ENST00000390467 BICDL1Q6ZP65 573 aa7.36□□□□□ -1.23
TRAV40-201ENST00000390467 RNF225M0QZC1 329 aaPredicted RBP7.35□□□□□ -1.23
TRAV40-201ENST00000390467 KHNYNO15037 678 aaKnown RBP7.35□□□□□ -1.23
TRAV40-201ENST00000390467 LGR5O75473 907 aa7.35□□□□□ -1.23
TRAV40-201ENST00000390467 FAM157BP0CG42 384 aa7.35□□□□□ -1.23
TRAV40-201ENST00000390467 LMOD1P29536 600 aaPredicted RBP7.35□□□□□ -1.23
TRAV40-201ENST00000390467 IRS1P35568 1242 aa7.35□□□□□ -1.23
TRAV40-201ENST00000390467 PSMA6P60900 246 aaKnown RBP7.35□□□□□ -1.23
TRAV40-201ENST00000390467 PTK7Q13308 1070 aa7.35□□□□□ -1.23
TRAV40-201ENST00000390467 STRN4Q9NRL3 753 aa7.35□□□□□ -1.23
TRAV40-201ENST00000390467 USP17L15C9J2P7 530 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 USP17L10C9JJH3 530 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 USP17L13C9JLJ4 530 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 USP17L12C9JPN9 530 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 USP17L11C9JVI0 530 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 USP17L21D6R901 530 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 USP17L18D6R9N7 530 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 USP17L22D6RA61 530 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 USP17L17D6RBQ6 530 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 USP17L19D6RCP7 530 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 USP17L20D6RJB6 530 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 EFSO43281 561 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 HIRAP54198 1017 aaPredicted RBP7.34□□□□□ -1.23
TRAV40-201ENST00000390467 USP17L24Q0WX57 530 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 DPYDQ12882 1025 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 SAMD5Q5TGI4 173 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 LRRC69Q6ZNQ3 347 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 NEDD1Q8NHV4 660 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 ENAMQ9NRM1 1142 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 LRRC4BQ9NT99 713 aa7.34□□□□□ -1.23
TRAV40-201ENST00000390467 CNTNAP5Q8WYK1 1306 aa7.33□□□□□ -1.24
TRAV40-201ENST00000390467 PPP1R12BO60237 982 aaPredicted RBP7.33□□□□□ -1.24
TRAV40-201ENST00000390467 SEC13P55735 322 aa7.33□□□□□ -1.24
TRAV40-201ENST00000390467 GRIN2CQ14957 1233 aa7.33□□□□□ -1.24
TRAV40-201ENST00000390467 SLCO4C1Q6ZQN7 724 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms