RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 TIMELESSQ9UNS1 1208 aa4.82□□□□□ -1.64
RNU6-541P-201ENST00000384709 USP3Q9Y6I4 520 aa4.82□□□□□ -1.64
RNU6-541P-201ENST00000384709 A0A1B0GTH6 734 aa4.81□□□□□ -1.64
RNU6-541P-201ENST00000384709 F11P03951 625 aa4.81□□□□□ -1.64
RNU6-541P-201ENST00000384709 THBS1P07996 1170 aa4.81□□□□□ -1.64
RNU6-541P-201ENST00000384709 RHOQP17081 205 aa4.81□□□□□ -1.64
RNU6-541P-201ENST00000384709 RASA1P20936 1047 aa4.81□□□□□ -1.64
RNU6-541P-201ENST00000384709 SEC13P55735 322 aa4.81□□□□□ -1.64
RNU6-541P-201ENST00000384709 UBAP2LQ14157 1087 aaKnown RBP4.81□□□□□ -1.64
RNU6-541P-201ENST00000384709 GPAT2Q6NUI2 795 aa4.81□□□□□ -1.64
RNU6-541P-201ENST00000384709 TMEM214Q6NUQ4 689 aaKnown RBP4.81□□□□□ -1.64
RNU6-541P-201ENST00000384709 LARP1Q6PKG0 1096 aaKnown RBP4.81□□□□□ -1.64
RNU6-541P-201ENST00000384709 TRIM22Q8IYM9 498 aa4.81□□□□□ -1.64
RNU6-541P-201ENST00000384709 NIFKQ9BYG3 293 aaKnown RBP4.81□□□□□ -1.64
RNU6-541P-201ENST00000384709 CRISPLD1Q9H336 500 aa4.81□□□□□ -1.64
RNU6-541P-201ENST00000384709 ZDHHC3Q9NYG2 299 aa4.81□□□□□ -1.64
RNU6-541P-201ENST00000384709 SERTAD1Q9UHV2 236 aa4.81□□□□□ -1.64
RNU6-541P-201ENST00000384709 EML1O00423 815 aa4.8□□□□□ -1.64
RNU6-541P-201ENST00000384709 DPYDQ12882 1025 aa4.8□□□□□ -1.64
RNU6-541P-201ENST00000384709 DBN1Q16643 649 aa4.8□□□□□ -1.64
RNU6-541P-201ENST00000384709 GNASQ5JWF2 1037 aa4.8□□□□□ -1.64
RNU6-541P-201ENST00000384709 GPR161Q8N6U8 529 aaKnown RBP4.8□□□□□ -1.64
RNU6-541P-201ENST00000384709 ZDHHC1Q8WTX9 485 aa4.8□□□□□ -1.64
RNU6-541P-201ENST00000384709 PBXIP1Q96AQ6 731 aa4.8□□□□□ -1.64
RNU6-541P-201ENST00000384709 ZNF837Q96EG3 531 aaPredicted RBP4.8□□□□□ -1.64
RNU6-541P-201ENST00000384709 CCDC97Q96F63 343 aaPredicted RBP4.8□□□□□ -1.64
RNU6-541P-201ENST00000384709 TIMMDC1Q9NPL8 285 aa4.8□□□□□ -1.64
RNU6-541P-201ENST00000384709 CUEDC1Q9NWM3 386 aaPredicted RBP4.8□□□□□ -1.64
RNU6-541P-201ENST00000384709 GPC6Q9Y625 555 aaPredicted RBP4.8□□□□□ -1.64
RNU6-541P-201ENST00000384709 ARID3CA6NKF2 412 aa4.79□□□□□ -1.64
RNU6-541P-201ENST00000384709 SFI1A8K8P3 1242 aa4.79□□□□□ -1.64
RNU6-541P-201ENST00000384709 H7C1W4 665 aa4.79□□□□□ -1.64
RNU6-541P-201ENST00000384709 C21orf2O43822 256 aa4.79□□□□□ -1.64
RNU6-541P-201ENST00000384709 PPP1R15AO75807 674 aaPredicted RBP4.79□□□□□ -1.64
RNU6-541P-201ENST00000384709 ATP4AP20648 1035 aa4.79□□□□□ -1.64
RNU6-541P-201ENST00000384709 GTF2E1P29083 439 aaPredicted RBP4.79□□□□□ -1.64
RNU6-541P-201ENST00000384709 PSMA6P60900 246 aaKnown RBP4.79□□□□□ -1.64
RNU6-541P-201ENST00000384709 PSME1Q06323 249 aa4.79□□□□□ -1.64
RNU6-541P-201ENST00000384709 FAM69CQ0P6D2 419 aa4.79□□□□□ -1.64
RNU6-541P-201ENST00000384709 SV2AQ7L0J3 742 aa4.79□□□□□ -1.64
RNU6-541P-201ENST00000384709 TNS4Q8IZW8 715 aa4.79□□□□□ -1.64
RNU6-541P-201ENST00000384709 CCDC82Q8N4S0 544 aa4.79□□□□□ -1.64
RNU6-541P-201ENST00000384709 ZNF594Q96JF6 807 aaPredicted RBP4.79□□□□□ -1.64
RNU6-541P-201ENST00000384709 NDFIP2Q9NV92 336 aa4.79□□□□□ -1.64
RNU6-541P-201ENST00000384709 ZMIZ1Q9ULJ6 1067 aa4.79□□□□□ -1.64
RNU6-541P-201ENST00000384709 ADAM23O75077 832 aa4.78□□□□□ -1.64
RNU6-541P-201ENST00000384709 IGFBP4P22692 258 aa4.78□□□□□ -1.64
RNU6-541P-201ENST00000384709 MSX1P28360 303 aa4.78□□□□□ -1.64
RNU6-541P-201ENST00000384709 WEE1P30291 646 aa4.78□□□□□ -1.64
RNU6-541P-201ENST00000384709 NOS2P35228 1153 aa4.78□□□□□ -1.64
RNU6-541P-201ENST00000384709 VEGFBP49765 207 aa4.78□□□□□ -1.64
RNU6-541P-201ENST00000384709 SWI5Q1ZZU3 235 aa4.78□□□□□ -1.64
RNU6-541P-201ENST00000384709 C1orf53Q5VUE5 145 aa4.78□□□□□ -1.64
RNU6-541P-201ENST00000384709 SLC9A9Q8IVB4 645 aa4.78□□□□□ -1.64
RNU6-541P-201ENST00000384709 Q8N3U1 123 aa4.78□□□□□ -1.64
RNU6-541P-201ENST00000384709 C2orf49Q9BVC5 232 aaPredicted RBP4.78□□□□□ -1.64
RNU6-541P-201ENST00000384709 ATAD2Q6PL18 1390 aa4.78□□□□□ -1.64
RNU6-541P-201ENST00000384709 ACIN1Q9UKV3 1341 aaKnown RBP4.77□□□□□ -1.65
RNU6-541P-201ENST00000384709 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.77□□□□□ -1.65
RNU6-541P-201ENST00000384709 IGHA1P01876 353 aa4.77□□□□□ -1.65
RNU6-541P-201ENST00000384709 KRT76Q01546 638 aa4.77□□□□□ -1.65
RNU6-541P-201ENST00000384709 SAMD5Q5TGI4 173 aa4.77□□□□□ -1.65
RNU6-541P-201ENST00000384709 NLRP8Q86W28 1048 aa4.77□□□□□ -1.65
RNU6-541P-201ENST00000384709 VWA5B2Q8N398 1253 aa4.77□□□□□ -1.65
RNU6-541P-201ENST00000384709 TSEN2Q8NCE0 465 aaKnown RBP4.77□□□□□ -1.65
RNU6-541P-201ENST00000384709 FAM200AQ8TCP9 573 aa4.77□□□□□ -1.65
RNU6-541P-201ENST00000384709 CFHR5Q9BXR6 569 aa4.77□□□□□ -1.65
RNU6-541P-201ENST00000384709 TSPAN10Q9H1Z9 355 aaPredicted RBP4.77□□□□□ -1.65
RNU6-541P-201ENST00000384709 NOVA2Q9UNW9 492 aaKnown RBP4.77□□□□□ -1.65
RNU6-541P-201ENST00000384709 SERTM1A2A2V5 107 aa4.76□□□□□ -1.65
RNU6-541P-201ENST00000384709 FOXO3O43524 673 aa4.76□□□□□ -1.65
RNU6-541P-201ENST00000384709 RFX1P22670 979 aa4.76□□□□□ -1.65
RNU6-541P-201ENST00000384709 PHKA2P46019 1235 aa4.76□□□□□ -1.65
RNU6-541P-201ENST00000384709 PLA2G4AP47712 749 aa4.76□□□□□ -1.65
RNU6-541P-201ENST00000384709 GAS6Q14393 721 aa4.76□□□□□ -1.65
RNU6-541P-201ENST00000384709 L3MBTL2Q969R5 705 aa4.76□□□□□ -1.65
RNU6-541P-201ENST00000384709 ZIC5Q96T25 663 aa4.76□□□□□ -1.65
RNU6-541P-201ENST00000384709 GAS2L1Q99501 681 aaPredicted RBP4.76□□□□□ -1.65
RNU6-541P-201ENST00000384709 NUCKS1Q9H1E3 243 aaKnown RBP4.76□□□□□ -1.65
RNU6-541P-201ENST00000384709 CABP1Q9NZU7 370 aa4.76□□□□□ -1.65
RNU6-541P-201ENST00000384709 RBM19Q9Y4C8 960 aaKnown RBP4.76□□□□□ -1.65
RNU6-541P-201ENST00000384709 SLURP2P0DP57 97 aa4.75□□□□□ -1.65
RNU6-541P-201ENST00000384709 TXLNAP40222 546 aa4.75□□□□□ -1.65
RNU6-541P-201ENST00000384709 NBPF1Q3BBV0 1214 aa4.75□□□□□ -1.65
RNU6-541P-201ENST00000384709 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
RNU6-541P-201ENST00000384709 TMEM88BA6NKF7 163 aa4.74□□□□□ -1.65
RNU6-541P-201ENST00000384709 OCLNQ16625 522 aa4.74□□□□□ -1.65
RNU6-541P-201ENST00000384709 CDCA8Q53HL2 280 aa4.74□□□□□ -1.65
RNU6-541P-201ENST00000384709 SH3PXD2AQ5TCZ1 1133 aa4.74□□□□□ -1.65
RNU6-541P-201ENST00000384709 CLP1Q92989 425 aaKnown RBP4.74□□□□□ -1.65
RNU6-541P-201ENST00000384709 COL26A1Q96A83 441 aa4.74□□□□□ -1.65
RNU6-541P-201ENST00000384709 MYO19Q96H55 970 aa4.74□□□□□ -1.65
RNU6-541P-201ENST00000384709 COL25A1Q9BXS0 654 aaPredicted RBP4.74□□□□□ -1.65
RNU6-541P-201ENST00000384709 KRTAP4-2Q9BYR5 136 aa4.74□□□□□ -1.65
RNU6-541P-201ENST00000384709 A0A1W2PNR3 127 aa4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 EFSO43281 561 aa4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 PPP1R12BO60237 982 aaPredicted RBP4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 FAM157BP0CG42 384 aa4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 TATP17735 454 aaPredicted RBP4.73□□□□□ -1.65
RNU6-541P-201ENST00000384709 SRSF11Q05519 484 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms