RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 SYCE3A1L190 88 aa13.4□□□□□ -0.26
HDAC6-203ENST00000376619 HSP90AB3PQ58FF7 597 aa13.4□□□□□ -0.26
HDAC6-203ENST00000376619 EDC3Q96F86 508 aaKnown RBP13.4□□□□□ -0.26
HDAC6-203ENST00000376619 GUCY1B3Q02153 619 aa13.4□□□□□ -0.26
HDAC6-203ENST00000376619 DDX46Q7L014 1031 aaKnown RBP13.4□□□□□ -0.26
HDAC6-203ENST00000376619 FLT4P35916 1363 aa13.4□□□□□ -0.26
HDAC6-203ENST00000376619 GSPT1P15170 499 aaKnown RBP13.4□□□□□ -0.26
HDAC6-203ENST00000376619 RRP12Q5JTH9 1297 aaKnown RBP13.4□□□□□ -0.26
HDAC6-203ENST00000376619 ARHGAP45Q92619 1136 aa13.4□□□□□ -0.26
HDAC6-203ENST00000376619 PUS7Q96PZ0 661 aaKnown RBP13.39□□□□□ -0.27
HDAC6-203ENST00000376619 PTPRCP08575 1304 aa13.39□□□□□ -0.27
HDAC6-203ENST00000376619 PKP1Q13835 747 aa13.39□□□□□ -0.27
HDAC6-203ENST00000376619 PROSER3Q2NL68 480 aa13.39□□□□□ -0.27
HDAC6-203ENST00000376619 CCDC82Q8N4S0 544 aa13.38□□□□□ -0.27
HDAC6-203ENST00000376619 CEP170BQ9Y4F5 1589 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-203ENST00000376619 GRPEL1Q9HAV7 217 aa13.38□□□□□ -0.27
HDAC6-203ENST00000376619 TFIP11Q9UBB9 837 aaKnown RBP13.38□□□□□ -0.27
HDAC6-203ENST00000376619 CNNM1Q9NRU3 951 aa13.38□□□□□ -0.27
HDAC6-203ENST00000376619 HAND2P61296 217 aa13.37□□□□□ -0.27
HDAC6-203ENST00000376619 ACSBG1Q96GR2 724 aa13.37□□□□□ -0.27
HDAC6-203ENST00000376619 FMNL2Q96PY5 1086 aa13.37□□□□□ -0.27
HDAC6-203ENST00000376619 SBNO2Q9Y2G9 1366 aa13.37□□□□□ -0.27
HDAC6-203ENST00000376619 E9PCH4 1651 aa13.37□□□□□ -0.27
HDAC6-203ENST00000376619 CAMK4Q16566 473 aa13.37□□□□□ -0.27
HDAC6-203ENST00000376619 IQSEC3Q9UPP2 1182 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-203ENST00000376619 PLEKHG1Q9ULL1 1385 aa13.37□□□□□ -0.27
HDAC6-203ENST00000376619 EDC4Q6P2E9 1401 aaKnown RBP13.36□□□□□ -0.27
HDAC6-203ENST00000376619 CPLX1O14810 134 aa13.36□□□□□ -0.27
HDAC6-203ENST00000376619 ANKRD13DQ6ZTN6 518 aa13.36□□□□□ -0.27
HDAC6-203ENST00000376619 CHST3Q7LGC8 479 aa13.36□□□□□ -0.27
HDAC6-203ENST00000376619 SYNMO15061 1565 aa13.36□□□□□ -0.27
HDAC6-203ENST00000376619 SKOR2Q2VWA4 1001 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-203ENST00000376619 SYAP1Q96A49 352 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-203ENST00000376619 NGLY1Q96IV0 654 aa13.36□□□□□ -0.27
HDAC6-203ENST00000376619 KDM5AP29375 1690 aaKnown RBP13.36□□□□□ -0.27
HDAC6-203ENST00000376619 SLC4A8Q2Y0W8 1093 aa13.36□□□□□ -0.27
HDAC6-203ENST00000376619 RNF20Q5VTR2 975 aa13.36□□□□□ -0.27
HDAC6-203ENST00000376619 CYP46A1Q9Y6A2 500 aa13.36□□□□□ -0.27
HDAC6-203ENST00000376619 TET3O43151 1660 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 RAD21O60216 631 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 UNC5CLQ8IV45 518 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 SPC24Q8NBT2 197 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 TMX3Q96JJ7 454 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 IDH1O75874 414 aaKnown RBP13.35□□□□□ -0.27
HDAC6-203ENST00000376619 ATP8B2P98198 1209 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 CCDC57Q2TAC2 916 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 PIBF1Q8WXW3 757 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 IQGAP3Q86VI3 1631 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 GOLIM4O00461 696 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 MRE11P49959 708 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 LARP1BQ659C4 914 aaKnown RBP13.35□□□□□ -0.27
HDAC6-203ENST00000376619 LMBR1LQ6UX01 489 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 VPS37DQ86XT2 251 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 PDRG1Q9NUG6 133 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 C3P01024 1663 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 TTC21AQ8NDW8 1320 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 RAB11FIP3O75154 756 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 BAG4O95429 457 aaKnown RBP13.35□□□□□ -0.27
HDAC6-203ENST00000376619 A1BGP04217 495 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 CCT2P78371 535 aaKnown RBP13.35□□□□□ -0.27
HDAC6-203ENST00000376619 IP6K1Q92551 441 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 USP44Q9H0E7 712 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 USP16Q9Y5T5 823 aa13.35□□□□□ -0.27
HDAC6-203ENST00000376619 AMOTQ4VCS5 1084 aa13.34□□□□□ -0.27
HDAC6-203ENST00000376619 HELBQ8NG08 1087 aaPredicted RBP13.34□□□□□ -0.27
HDAC6-203ENST00000376619 TIMM10P62072 90 aa13.34□□□□□ -0.27
HDAC6-203ENST00000376619 LARP1Q6PKG0 1096 aaKnown RBP13.34□□□□□ -0.27
HDAC6-203ENST00000376619 FAM173BQ6P4H8 233 aa13.34□□□□□ -0.27
HDAC6-203ENST00000376619 NFXL1Q6ZNB6 911 aa13.34□□□□□ -0.27
HDAC6-203ENST00000376619 ZNF496Q96IT1 587 aaPredicted RBP13.34□□□□□ -0.27
HDAC6-203ENST00000376619 C8orf37Q96NL8 207 aa13.34□□□□□ -0.27
HDAC6-203ENST00000376619 GLRX3O76003 335 aaKnown RBP13.33□□□□□ -0.27
HDAC6-203ENST00000376619 BLOC1S2Q6QNY1 142 aa13.33□□□□□ -0.27
HDAC6-203ENST00000376619 IFNL2Q8IZJ0 200 aa13.33□□□□□ -0.27
HDAC6-203ENST00000376619 BICC1Q9H694 974 aaKnown RBP13.33□□□□□ -0.27
HDAC6-203ENST00000376619 XRCC6P12956 609 aaKnown RBP eCLIP13.33□□□□□ -0.28
HDAC6-203ENST00000376619 TBC1D2BQ9UPU7 963 aa13.33□□□□□ -0.28
HDAC6-203ENST00000376619 ZNF594Q96JF6 807 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-203ENST00000376619 ESYT1Q9BSJ8 1104 aa13.33□□□□□ -0.28
HDAC6-203ENST00000376619 ECHDC1Q9NTX5 307 aa13.33□□□□□ -0.28
HDAC6-203ENST00000376619 CEP126Q9P2H0 1117 aa13.33□□□□□ -0.28
HDAC6-203ENST00000376619 PALD1Q9ULE6 856 aa13.33□□□□□ -0.28
HDAC6-203ENST00000376619 ADAMTSL3P82987 1691 aa13.33□□□□□ -0.28
HDAC6-203ENST00000376619 USP26Q9BXU7 913 aa13.32□□□□□ -0.28
HDAC6-203ENST00000376619 RNMTO43148 476 aaKnown RBP13.32□□□□□ -0.28
HDAC6-203ENST00000376619 KIAA2012Q0VF49 1180 aa13.32□□□□□ -0.28
HDAC6-203ENST00000376619 REREQ9P2R6 1566 aa13.32□□□□□ -0.28
HDAC6-203ENST00000376619 SIGLEC1Q9BZZ2 1709 aa13.32□□□□□ -0.28
HDAC6-203ENST00000376619 GRM8O00222 908 aa13.32□□□□□ -0.28
HDAC6-203ENST00000376619 RNF17Q9BXT8 1623 aaKnown RBP13.32□□□□□ -0.28
HDAC6-203ENST00000376619 AKAP4Q5JQC9 854 aa13.32□□□□□ -0.28
HDAC6-203ENST00000376619 TMOD3Q9NYL9 352 aa13.32□□□□□ -0.28
HDAC6-203ENST00000376619 ABCF2Q9UG63 623 aa13.32□□□□□ -0.28
HDAC6-203ENST00000376619 TTC39AQ5SRH9 613 aa13.31□□□□□ -0.28
HDAC6-203ENST00000376619 CCDC129Q6ZRS4 1044 aa13.31□□□□□ -0.28
HDAC6-203ENST00000376619 RALYLQ86SE5 291 aaKnown RBP13.31□□□□□ -0.28
HDAC6-203ENST00000376619 AXIN2Q9Y2T1 843 aa13.31□□□□□ -0.28
HDAC6-203ENST00000376619 MAP3K5Q99683 1374 aa13.31□□□□□ -0.28
HDAC6-203ENST00000376619 HSPA1LP34931 641 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms