RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 SRGAP3O43295 1099 aa17.65■□□□□ 0.42
MSH5-201ENST00000375703 ZSCAN30Q86W11 494 aa17.65■□□□□ 0.42
MSH5-201ENST00000375703 EIF4A1P60842 406 aaKnown RBP17.65■□□□□ 0.42
MSH5-201ENST00000375703 IL25Q9H293 177 aa17.65■□□□□ 0.42
MSH5-201ENST00000375703 LGR6Q9HBX8 967 aa17.65■□□□□ 0.42
MSH5-201ENST00000375703 MBD3O95983 291 aa17.64■□□□□ 0.42
MSH5-201ENST00000375703 NBPF7P0C2Y1 421 aaPredicted RBP17.64■□□□□ 0.42
MSH5-201ENST00000375703 HSPA4P34932 840 aa17.64■□□□□ 0.42
MSH5-201ENST00000375703 LRSAM1Q6UWE0 723 aa17.64■□□□□ 0.42
MSH5-201ENST00000375703 KIF1BPQ96EK5 621 aa17.64■□□□□ 0.42
MSH5-201ENST00000375703 IP6K1Q92551 441 aa17.64■□□□□ 0.41
MSH5-201ENST00000375703 CACNA1FO60840 1977 aa17.64■□□□□ 0.41
MSH5-201ENST00000375703 SYCE3A1L190 88 aa17.63■□□□□ 0.41
MSH5-201ENST00000375703 PI4K2BQ8TCG2 481 aa17.63■□□□□ 0.41
MSH5-201ENST00000375703 CHMP4AQ9BY43 222 aa17.63■□□□□ 0.41
MSH5-201ENST00000375703 PI4KAP2A4QPH2 592 aa17.63■□□□□ 0.41
MSH5-201ENST00000375703 NBPF6Q5VWK0 638 aa17.63■□□□□ 0.41
MSH5-201ENST00000375703 PI4KAP1Q8N8J0 262 aa17.63■□□□□ 0.41
MSH5-201ENST00000375703 DNAAF4Q8WXU2 420 aa17.63■□□□□ 0.41
MSH5-201ENST00000375703 NBPF4Q96M43 638 aa17.63■□□□□ 0.41
MSH5-201ENST00000375703 CHPF2Q9P2E5 772 aa17.63■□□□□ 0.41
MSH5-201ENST00000375703 CEMIPQ8WUJ3 1361 aa17.63■□□□□ 0.41
MSH5-201ENST00000375703 TUBGCP6Q96RT7 1819 aa17.63■□□□□ 0.41
MSH5-201ENST00000375703 BEND3Q5T5X7 828 aa17.63■□□□□ 0.41
MSH5-201ENST00000375703 PHF8Q9UPP1 1060 aa17.63■□□□□ 0.41
MSH5-201ENST00000375703 MSNP26038 577 aaKnown RBP17.62■□□□□ 0.41
MSH5-201ENST00000375703 HOXB7P09629 217 aa17.62■□□□□ 0.41
MSH5-201ENST00000375703 CNTROBQ8N137 903 aa17.62■□□□□ 0.41
MSH5-201ENST00000375703 SGSM2O43147 1006 aa17.61■□□□□ 0.41
MSH5-201ENST00000375703 KCNQ3O43525 872 aa17.61■□□□□ 0.41
MSH5-201ENST00000375703 HS1BP3Q53T59 392 aa17.61■□□□□ 0.41
MSH5-201ENST00000375703 HSP90AB4PQ58FF6 505 aa17.61■□□□□ 0.41
MSH5-201ENST00000375703 ZBTB7CA1YPR0 619 aa17.6■□□□□ 0.41
MSH5-201ENST00000375703 TEFQ10587 303 aa17.6■□□□□ 0.41
MSH5-201ENST00000375703 PDLIM2Q96JY6 352 aa17.6■□□□□ 0.41
MSH5-201ENST00000375703 BTBD11A6QL63 1104 aa17.59■□□□□ 0.41
MSH5-201ENST00000375703 ANXA1P04083 346 aa17.59■□□□□ 0.41
MSH5-201ENST00000375703 FOXD4L6Q3SYB3 417 aaPredicted RBP17.59■□□□□ 0.41
MSH5-201ENST00000375703 FOXD4L3Q6VB84 417 aaPredicted RBP17.59■□□□□ 0.41
MSH5-201ENST00000375703 KIAA1211Q6ZU35 1233 aa17.59■□□□□ 0.41
MSH5-201ENST00000375703 SNX14Q9Y5W7 946 aa17.59■□□□□ 0.41
MSH5-201ENST00000375703 RAD50Q92878 1312 aa17.59■□□□□ 0.41
MSH5-201ENST00000375703 WDR33Q9C0J8 1336 aaKnown RBP17.59■□□□□ 0.41
MSH5-201ENST00000375703 MARF1Q9Y4F3 1742 aaKnown RBP17.59■□□□□ 0.41
MSH5-201ENST00000375703 OS9Q13438 667 aaPredicted RBP17.58■□□□□ 0.41
MSH5-201ENST00000375703 PLEKHG5O94827 1062 aa17.58■□□□□ 0.4
MSH5-201ENST00000375703 LSG1Q9H089 658 aaKnown RBP17.58■□□□□ 0.4
MSH5-201ENST00000375703 PSME1Q06323 249 aa17.57■□□□□ 0.4
MSH5-201ENST00000375703 AKAP4Q5JQC9 854 aa17.57■□□□□ 0.4
MSH5-201ENST00000375703 CWC27Q6UX04 472 aaKnown RBP17.57■□□□□ 0.4
MSH5-201ENST00000375703 SYAP1Q96A49 352 aaPredicted RBP17.57■□□□□ 0.4
MSH5-201ENST00000375703 ZNF530Q6P9A1 599 aaPredicted RBP17.57■□□□□ 0.4
MSH5-201ENST00000375703 MPRIPQ6WCQ1 1025 aa17.57■□□□□ 0.4
MSH5-201ENST00000375703 N4BP2Q86UW6 1770 aaPredicted RBP17.57■□□□□ 0.4
MSH5-201ENST00000375703 PLEKHO1Q53GL0 409 aaPredicted RBP17.56■□□□□ 0.4
MSH5-201ENST00000375703 GDPD2Q9HCC8 539 aa17.56■□□□□ 0.4
MSH5-201ENST00000375703 USP48Q86UV5 1035 aa17.56■□□□□ 0.4
MSH5-201ENST00000375703 RASEFQ8IZ41 740 aa17.56■□□□□ 0.4
MSH5-201ENST00000375703 DBF4Q9UBU7 674 aaPredicted RBP17.56■□□□□ 0.4
MSH5-201ENST00000375703 NOL7Q9UMY1 257 aaKnown RBP17.56■□□□□ 0.4
MSH5-201ENST00000375703 GLRX3O76003 335 aaKnown RBP17.56■□□□□ 0.4
MSH5-201ENST00000375703 KCNH5Q8NCM2 988 aa17.56■□□□□ 0.4
MSH5-201ENST00000375703 LRRC59Q96AG4 307 aaKnown RBP17.56■□□□□ 0.4
MSH5-201ENST00000375703 SPG7Q9UQ90 795 aa17.56■□□□□ 0.4
MSH5-201ENST00000375703 TTC41PQ6P2S7 1318 aa17.55■□□□□ 0.4
MSH5-201ENST00000375703 CLASRPQ8N2M8 674 aaKnown RBP17.55■□□□□ 0.4
MSH5-201ENST00000375703 RNF214Q8ND24 703 aa17.55■□□□□ 0.4
MSH5-201ENST00000375703 RBM33Q96EV2 1170 aaKnown RBP17.55■□□□□ 0.4
MSH5-201ENST00000375703 TTC14Q96N46 770 aa17.55■□□□□ 0.4
MSH5-201ENST00000375703 USP54Q70EL1 1684 aa17.55■□□□□ 0.4
MSH5-201ENST00000375703 GADD45BO75293 160 aaPredicted RBP17.55■□□□□ 0.4
MSH5-201ENST00000375703 TSPY26PQ9H489 355 aa17.55■□□□□ 0.4
MSH5-201ENST00000375703 C9orf78Q9NZ63 289 aaPredicted RBP17.55■□□□□ 0.4
MSH5-201ENST00000375703 LIMCH1Q9UPQ0 1083 aa17.55■□□□□ 0.4
MSH5-201ENST00000375703 ADCY9O60503 1353 aa17.55■□□□□ 0.4
MSH5-201ENST00000375703 OFD1O75665 1012 aa17.54■□□□□ 0.4
MSH5-201ENST00000375703 AK2P54819 239 aa17.54■□□□□ 0.4
MSH5-201ENST00000375703 USP42Q9H9J4 1324 aaKnown RBP17.54■□□□□ 0.4
MSH5-201ENST00000375703 ESCO1Q5FWF5 840 aa17.54■□□□□ 0.4
MSH5-201ENST00000375703 RUFY2Q8WXA3 655 aa17.54■□□□□ 0.4
MSH5-201ENST00000375703 LARP6Q9BRS8 491 aaKnown RBP17.54■□□□□ 0.4
MSH5-201ENST00000375703 DIAPH3Q9NSV4 1193 aa17.54■□□□□ 0.4
MSH5-201ENST00000375703 MAP3K2Q9Y2U5 619 aa17.54■□□□□ 0.4
MSH5-201ENST00000375703 MTX1Q13505 466 aa17.53■□□□□ 0.4
MSH5-201ENST00000375703 AMOTQ4VCS5 1084 aa17.53■□□□□ 0.4
MSH5-201ENST00000375703 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.53■□□□□ 0.4
MSH5-201ENST00000375703 RNMTO43148 476 aaKnown RBP17.52■□□□□ 0.4
MSH5-201ENST00000375703 PHF14O94880 888 aa17.52■□□□□ 0.4
MSH5-201ENST00000375703 C1orf141Q5JVX7 400 aa17.52■□□□□ 0.4
MSH5-201ENST00000375703 RUFY3Q7L099 469 aa17.52■□□□□ 0.4
MSH5-201ENST00000375703 ALDH1L1O75891 902 aa17.52■□□□□ 0.39
MSH5-201ENST00000375703 TPM2P07951 284 aa17.52■□□□□ 0.39
MSH5-201ENST00000375703 ECHDC1Q9NTX5 307 aa17.52■□□□□ 0.39
MSH5-201ENST00000375703 MED1Q15648 1581 aaPredicted RBP17.51■□□□□ 0.39
MSH5-201ENST00000375703 IFIT2P09913 472 aaKnown RBP17.51■□□□□ 0.39
MSH5-201ENST00000375703 KSR2Q6VAB6 950 aa17.51■□□□□ 0.39
MSH5-201ENST00000375703 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.51■□□□□ 0.39
MSH5-201ENST00000375703 HDAC5Q9UQL6 1122 aa17.51■□□□□ 0.39
MSH5-201ENST00000375703 RPAP1Q9BWH6 1393 aaPredicted RBP17.51■□□□□ 0.39
MSH5-201ENST00000375703 ZSCAN22P10073 491 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 199.3 ms